Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N04
(790 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 32 0.54
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 32 0.54
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 31 0.94
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 31 0.94
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical ... 31 1.2
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 29 3.8
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 29 3.8
Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical p... 29 5.0
Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical p... 29 5.0
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 28 6.6
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 28 6.6
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 28 8.8
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 28 8.8
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 32.3 bits (70), Expect = 0.41
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = -1
Query: 616 SMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSP 437
S SRS+ R+ R + + SRS SR++ P RS+ S S ++S SRS RSP
Sbjct: 212 SRSRSRSRSRDRRRSRSRSSSRSKSRSR-SPPKRSRRESKSKSRSRSRSRSADNRKSRSP 270
Query: 436 YRT 428
R+
Sbjct: 271 SRS 273
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 31.9 bits (69), Expect = 0.54
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = -1
Query: 691 RSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRS 512
RSPS ++ P P + ++ P + R+PS + PP P R+ SR+ K P
Sbjct: 321 RSPSQSK----SPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRS--KSPPAR 374
Query: 511 QLTSPSTGHTQSTSR 467
+ SPS + R
Sbjct: 375 RRRSPSASKSPPAPR 389
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.54
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 551 KHIPYPVEKAVPFPVNIPVDRPYPVHI 471
+H+P PV VP P+ +PV P P +
Sbjct: 154 QHVPVPVPVQVPVPIRVPVPVPVPTPV 180
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 31.1 bits (67), Expect = 0.94
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = -1
Query: 679 HTR*KNQCP-TPL-KYTLTAQCPSMSRSQFRTPSRYQC---PPLTPSRSTSRTQ*KRPCR 515
H R Q P +PL K LT + S S F+ P Y+ PPL P STS P
Sbjct: 1333 HPRRMTQQPMSPLAKSPLTPSRDNSSPSAFQFPVVYEASTAPPLPPRPSTSSDVSSSPST 1392
Query: 514 SQLTSPSTGHTQSTSR 467
S TS +T Q R
Sbjct: 1393 SGSTSSATKENQEQLR 1408
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 31.1 bits (67), Expect = 0.94
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = -1
Query: 679 HTR*KNQCP-TPL-KYTLTAQCPSMSRSQFRTPSRYQC---PPLTPSRSTSRTQ*KRPCR 515
H R Q P +PL K LT + S S F+ P Y+ PPL P STS P
Sbjct: 1333 HPRRMTQQPMSPLAKSPLTPSRDNSSPSAFQFPVVYEASTAPPLPPRPSTSSDVSSSPST 1392
Query: 514 SQLTSPSTGHTQSTSR 467
S TS +T Q R
Sbjct: 1393 SGSTSSATKENQEQLR 1408
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 545 IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPV 453
+P PV + VP P+ +P+ P P+ + VPV
Sbjct: 15 VPAPVPQPVPVPMPMPMPMPMPMPVPVPVPV 45
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 542 PYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 447
P PV VP PV +P+ P P+ + VPV +
Sbjct: 12 PVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 545 IPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHI 447
IP PV P P +PV P P+ + +PV +
Sbjct: 9 IPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPV 41
>AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical
protein K06A5.1 protein.
Length = 629
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = -1
Query: 694 SRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCR 515
SR S R K + PT + T+ C R+ + PPL SRS + +P
Sbjct: 128 SRKWSVGRSKKRPPTQMAENETSSCMKPREKSTRSQAEVYLPPLKRSRSKCQVSAPQPSN 187
Query: 514 S--QLTSPSTGHTQSTSRSTCLCT 449
S QL+ + SR+ C T
Sbjct: 188 SSLQLSQCISESVPRRSRTRCRTT 211
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 589 PSRY-QCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYR 431
PSR+ Q PLTPS STS +Q P + SP G + T RS +P+R
Sbjct: 577 PSRHAQHSPLTPSTSTSSSQLLAPPK----SPQPGTSSQTFRSQASRLPIAPHR 626
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -1
Query: 766 QVPSKGPCGQTLXPCIFPNQCLTPSRSPSHTR*KNQCP 653
Q+P+K GQTL PCIF C S SH +CP
Sbjct: 300 QLPNKTTNGQTLSPCIF---C----SSTSHVHRHEECP 330
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -1
Query: 655 PTPLKYT-LTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQ 479
PT +K T T P+ +S TP+ + P TP+ T+ + ++P+T T
Sbjct: 380 PTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPSTM 439
Query: 478 STSRST 461
+S +T
Sbjct: 440 KSSPTT 445
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -1
Query: 655 PTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSR-STSRTQ*KRPC--RSQLTSPSTGH 485
PTP T P+ +S TP+ + P TP+ +T ++ P + ++P+T
Sbjct: 153 PTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 212
Query: 484 TQSTSRST 461
T +T +ST
Sbjct: 213 TPTTMKST 220
>Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 28.7 bits (61), Expect = 5.0
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -1
Query: 631 TAQCPSMSRSQFRTPSRY-QCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCL 455
TA S SRS+ R+ S Q L +RS S + +R ++ SPS+ ++S SRST
Sbjct: 83 TASSRSRSRSRSRSRSTMNQQIRLARTRSASGGKLRRSRSARRRSPSSSASRSRSRSTSR 142
Query: 454 CTLRSPYRTQLRYR 413
+S +RYR
Sbjct: 143 TRAQS---IPIRYR 153
>Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 28.7 bits (61), Expect = 5.0
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -1
Query: 631 TAQCPSMSRSQFRTPSRY-QCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCL 455
TA S SRS+ R+ S Q L +RS S + +R ++ SPS+ ++S SRST
Sbjct: 83 TASSRSRSRSRSRSRSTMNQQIRLARTRSASGGKLRRSRSARRRSPSSSASRSRSRSTSR 142
Query: 454 CTLRSPYRTQLRYR 413
+S +RYR
Sbjct: 143 TRAQS---IPIRYR 153
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 28.3 bits (60), Expect = 6.6
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = -1
Query: 694 SRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQF-RTPSRYQCPPLTPSRSTSRTQ*KRPC 518
S+SP+ R N TP + + + S+ +TPS+ SRS SR RP
Sbjct: 42 SKSPARARTSNVKKTPSRSASKSATRGRTASKTPKTPSKTPSSASARSRSRSR---GRPT 98
Query: 517 RSQLTSPSTGHTQSTSRSTCLCTLRSP 437
+ S ST STS ++P
Sbjct: 99 NASRLSASTPSASSTSVKRSRSVTKTP 125
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -3
Query: 551 KHIPYPVEKAV--PFPVNIPVDRPYPVHIEKHVPVHIEK 441
KH P P K + P P+ IP P+P + K +P H K
Sbjct: 189 KHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPMPKHKPK 227
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 542 PYPVEKAVPFPVNIPVDRPYPVHIEKHVP 456
P P+ K +PFP +P +P P + K P
Sbjct: 238 PMPIPKPMPFPKPMPKPKPKPKPMPKPKP 266
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/87 (22%), Positives = 27/87 (31%)
Frame = -2
Query: 735 PXPRAYSQTSALPRREARPIPGRKTSALXXXXXXXXXXXXXXREASSVPRQGTSARPLPR 556
P P + P E P P + S A + P T A P P
Sbjct: 212 PAPVVEETPAPTPAAEETPAPATEASNAVGTPEGYVDGTANAASAVAEPAVETPA-PAPA 270
Query: 555 REAHPVPSRKGRAVPS*HPRRQAIPSP 475
E P P+ P+ P + P+P
Sbjct: 271 AEETPAPATSSEEAPAPAPTAEETPAP 297
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/86 (20%), Positives = 29/86 (33%)
Frame = -2
Query: 738 RPXPRAYSQTSALPRREARPIPGRKTSALXXXXXXXXXXXXXXREASSVPRQGTSARPLP 559
+P P+ + + P+ E +P P K + P+ P P
Sbjct: 224 KPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNP 283
Query: 558 RREAHPVPSRKGRAVPS*HPRRQAIP 481
E P P K + P +PR + P
Sbjct: 284 MPELKPKPKHKPNSRPKPNPRPKPKP 309
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/88 (18%), Positives = 32/88 (36%)
Frame = -2
Query: 738 RPXPRAYSQTSALPRREARPIPGRKTSALXXXXXXXXXXXXXXREASSVPRQGTSARPLP 559
+P P+ + + P + +P P K + + P+ +P P
Sbjct: 188 KPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKP 247
Query: 558 RREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+ + P P K ++ P P+ + P P
Sbjct: 248 KPKPEPKPKTKLKSEPKPKPKLKPKPKP 275
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -1
Query: 610 SRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRST 461
SRS+ R+ SR + + SRS SR +R R + + + G ST++ T
Sbjct: 126 SRSRSRSRSRSRSRSYSRSRSGSRRSSRRRSRRRSSLKARGRRASTAKKT 175
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 571 PPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLR 443
PP+ +R+ + + +RP R Q+ SP +G + + C+C R
Sbjct: 187 PPVVVTRAPAIIENERPWRGQVCSPQSG---CSGGAACICGAR 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,461,860
Number of Sequences: 27780
Number of extensions: 244506
Number of successful extensions: 993
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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