Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N04
(790 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40040.1 68415.m04920 defective chloroplasts and leaves prote... 40 0.001
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 36 0.040
At4g35785.2 68417.m05083 transformer serine/arginine-rich ribonu... 33 0.29
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 33 0.29
At4g00890.1 68417.m00120 proline-rich family protein contains pr... 31 1.2
At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative stro... 30 2.0
At1g49890.1 68414.m05593 expressed protein contains Pfam domain,... 30 2.0
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 29 2.7
At3g16460.2 68416.m02097 jacalin lectin family protein contains ... 29 2.7
At3g16460.1 68416.m02098 jacalin lectin family protein contains ... 29 2.7
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 2.7
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 29 3.5
At4g35785.1 68417.m05082 transformer serine/arginine-rich ribonu... 29 3.5
At4g31580.1 68417.m04485 splicing factor RSZp22 (RSZP22) / 9G8-l... 29 3.5
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 28 6.1
>At2g40040.1 68415.m04920 defective chloroplasts and leaves
protein-related / DCL protein-related similar to DCL
protein, chloroplast precursor (Defective chloroplasts
and leaves protein) (Swiss-Prot:Q42463) [Lycopersicon
esculentum]
Length = 839
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Frame = -1
Query: 709 QCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ* 530
Q T S+SPS TR Q P+ + AQ PS ++SQ ++ S+ Q + S+S S++Q
Sbjct: 749 QTQTQSQSPSQTR--AQSPSQAQ----AQSPSQTQSQSQSQSQSQSQSQSQSQSQSQSQS 802
Query: 529 KRPCRSQLTSPSTGHTQSTSRSTCLC---TLRSPYRTQ 425
+ +SQ SPS TQS S++ + +SP +TQ
Sbjct: 803 QSQSQSQ--SPSQTQTQSPSQTQAQAQSPSSQSPSQTQ 838
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = -1
Query: 739 QTLXPCIFPNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLT 560
Q P +Q + S+S S ++ ++Q + + +Q S S++Q ++PS+ Q +
Sbjct: 769 QAQSPSQTQSQSQSQSQSQSQSQSQSQSQSQSQSQSQSQSQSPSQTQTQSPSQTQAQAQS 828
Query: 559 P-SRSTSRTQ 533
P S+S S+TQ
Sbjct: 829 PSSQSPSQTQ 838
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 35.5 bits (78), Expect = 0.040
Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 2/106 (1%)
Frame = -1
Query: 748 PCGQTLXPCIFPNQCLTPSRSP--SHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQ 575
P GQ P P+ ++PS SP H + P+ L T+ S TPS
Sbjct: 622 PAGQLGAPPATPSMVVSPSTSPPAGHLGSPSDTPSSLVSPSTSPPAGHLGSPSDTPSSVV 681
Query: 574 CPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSP 437
P +PS S S + P SPS + S S S SP
Sbjct: 682 TPSASPSTSPSASPSVSPSAFPSASPSASPSASPSVSPSASPSASP 727
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/86 (27%), Positives = 33/86 (38%)
Frame = -1
Query: 748 PCGQTLXPCIFPNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCP 569
P G P P+ ++PS SP + TP + PS S S + S P
Sbjct: 644 PAGHLGSPSDTPSSLVSPSTSPPAGHLGSPSDTPSSVVTPSASPSTSPSASPSVSPSAFP 703
Query: 568 PLTPSRSTSRTQ*KRPCRSQLTSPST 491
+PS S S + P S SP +
Sbjct: 704 SASPSASPSASPSVSPSASPSASPQS 729
>At4g35785.2 68417.m05083 transformer serine/arginine-rich
ribonucleoprotein, putative similar to transformer-SR
ribonucleoprotein [Nicotiana tabacum]
gi|1781299|emb|CAA70700
Length = 141
Score = 32.7 bits (71), Expect = 0.29
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Frame = -1
Query: 688 SPSHTR*KNQCPTPLKYTLTAQCPSMSRSQ----FRTPSRYQCPPLTPSRSTSRTQ*KRP 521
SP R ++ P+P K ++ S SRS+ R+ SR P++PSRS R++ +
Sbjct: 4 SPQRRR-DSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRSRSRSR 62
Query: 520 CRSQLTSPST 491
RS++ +P T
Sbjct: 63 GRSEVENPGT 72
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 32.7 bits (71), Expect = 0.29
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = -1
Query: 700 TPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSR--YQCPPLTPSRSTSRTQ*K 527
+PSRSP + ++ +P++ + + S +R R+ SR + P + SRS R+ K
Sbjct: 522 SPSRSPVRSSRRSLSRSPIQLSRRSLSRSPTRLSRRSLSRSPIRSPRKSVSRSPVRSSRK 581
Query: 526 RPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 419
RS + S ++S RS+ RSP R R
Sbjct: 582 SVSRSPVRSSRRRISRSPVRSSRKSVSRSPIRLSRR 617
Score = 30.7 bits (66), Expect = 1.2
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = -1
Query: 700 TPSRSPSHTR*KNQCPT-PLKYTLTAQCPSMS--RSQFRTPSR--YQCPPLTPSRSTSRT 536
+PSRSP + + PL+ + + + PS S RS R+ SR Q + SRS +R
Sbjct: 496 SPSRSPVRSASRGSLGRGPLRRS-SRRSPSRSPVRSSRRSLSRSPIQLSRRSLSRSPTRL 554
Query: 535 Q*KRPCRSQLTSPSTGHTQSTSRSTCLCTLRSPYRTQLR 419
+ RS + SP ++S RS+ RSP R+ R
Sbjct: 555 SRRSLSRSPIRSPRKSVSRSPVRSSRKSVSRSPVRSSRR 593
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 589 PSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSPSTGHTQSTSRS 464
PS+ + L+P R+ S++ P RSQ SPS+ + RS
Sbjct: 374 PSKSRSRSLSPKRTVSKSTSVSPRRSQSKSPSSSPRWNGGRS 415
Score = 27.9 bits (59), Expect = 8.1
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Frame = -1
Query: 688 SPSHTR*KNQCPTPLKYTLTAQCPS-----MSRSQFRTPSRYQCPPLTPSRSTSRTQ*KR 524
SPS R + TP +Y ++ S +R R+P R + PP RS S +
Sbjct: 722 SPSRFRSPLRGRTPPRYRRRSRSVSPGLCYRNRRYSRSPIRSRSPPYRKRRSPSASHSLS 781
Query: 523 PCRSQLTSPS-------TGHTQSTSRS 464
P RS+ S S TG +S SRS
Sbjct: 782 PSRSRSRSKSYSKSPIGTGKARSVSRS 808
>At4g00890.1 68417.m00120 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 431
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -1
Query: 655 PTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSP 497
P P + PSM + PPL PS+S T+ + P SQ +SP
Sbjct: 175 PPPQEAKTPPSSPSMMLNATEEFESQPKPPLLPSKSIDETRLRSPLMSQASSP 227
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -1
Query: 715 PNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRT 536
P L PS+S TR ++ PL ++ P S+S +R Q PP++P +S +
Sbjct: 201 PKPPLLPSKSIDETRLRS----PLMSQASSPPPLPSKSIDENETRSQSPPISPPKSDKQA 256
Query: 535 Q 533
+
Sbjct: 257 R 257
>At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative strong
similarity to SP|O22315 Pre-mRNA splicing factor SF2
(SR1 protein) {Arabidopsis thaliana}
Length = 300
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = -1
Query: 628 AQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRPCRSQLTSP--STGHTQSTSRSTCL 455
++ PS SRS+ R+ SR + + SRS S ++ K P + SP S + S SRS
Sbjct: 205 SRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSPRKDLSKSPRRSLSRSISKSRSPSP 264
Query: 454 CTLRSPYRTQLR 419
+SP R R
Sbjct: 265 DKKKSPPRAMSR 276
>At1g49890.1 68414.m05593 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 659
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 715 PNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQF-RTPSRYQCPPLTPSRSTSR 539
P++ L+PS PSH+ T T T+ S S S RT RY P SRST+
Sbjct: 37 PSRYLSPS--PSHSVSSTTTTTTTTTTTTSSSSSSSSSAILRTSKRYPSPSPLLSRSTTN 94
Query: 538 T 536
+
Sbjct: 95 S 95
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 570 RPLPRREAHPVPSRKGRAVPS*HPRRQAIPSP 475
+P+P + PVPS K + VPS ++PSP
Sbjct: 37 KPVPSPKPKPVPSPKPKPVPSPSVPSPSVPSP 68
>At3g16460.2 68416.m02097 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 647
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 454 TGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
TGT TG G TG TG GT TG G
Sbjct: 138 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 167
>At3g16460.1 68416.m02098 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 705
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 454 TGTCFSMWTGYGLSTGMLTGNGTAFSTGYG 543
TGT TG G TG TG GT TG G
Sbjct: 138 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 167
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.5 bits (63), Expect = 2.7
Identities = 26/90 (28%), Positives = 32/90 (35%), Gaps = 3/90 (3%)
Frame = -2
Query: 735 PXPRAYSQTSALPRREARPIPGRKTSALXXXXXXXXXXXXXXREASSVPRQGTSAR---P 565
P R S L +R PGR S + +P + R P
Sbjct: 404 PLYRRNRSRSPLAKRGRSDSPGRSPSPVARLRDPTGARLPSPSIEQRLPSPPVAQRLPSP 463
Query: 564 LPRREAHPVPSRKGRAVPS*HPRRQAIPSP 475
PRR P P R +PS PRR +PSP
Sbjct: 464 PPRRAGLPSPPPAQR-LPSPPPRRAGLPSP 492
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/76 (31%), Positives = 28/76 (36%), Gaps = 2/76 (2%)
Frame = -2
Query: 696 RREARPI-PGRKTSALXXXXXXXXXXXXXXREASSVP-RQGTSARPLPRREAHPVPSRKG 523
RR RP GR+ S R + S P R+ S P RR P P +
Sbjct: 290 RRHRRPTHEGRRQSPAPSRRRRSPSPPARRRRSPSPPARRRRSPSPPARRHRSPTPPARQ 349
Query: 522 RAVPS*HPRRQAIPSP 475
R PS RR P P
Sbjct: 350 RRSPSPPARRHRSPPP 365
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 691 RSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KR-PCR 515
RSPS + + P+PL + P R++ R+P + +P RS S R P
Sbjct: 380 RSPSPPARRRRSPSPLYRRNRSPSPLYRRNRSRSPLAKRGRSDSPGRSPSPVARLRDPTG 439
Query: 514 SQLTSPS 494
++L SPS
Sbjct: 440 ARLPSPS 446
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 29.1 bits (62), Expect = 3.5
Identities = 26/88 (29%), Positives = 40/88 (45%)
Frame = -1
Query: 700 TPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTPSRYQCPPLTPSRSTSRTQ*KRP 521
+PS SP+HT + TP A PS S + + S P +P+ S S + P
Sbjct: 220 SPSHSPAHTPSHSPAHTPSH--SPAHAPSHSPAHAPSHSPAHAPSHSPAHSPSHS----P 273
Query: 520 CRSQLTSPSTGHTQSTSRSTCLCTLRSP 437
+ SPS+ QS + + + T +SP
Sbjct: 274 ATPKSPSPSSSPAQSPATPSPM-TPQSP 300
>At4g35785.1 68417.m05082 transformer serine/arginine-rich
ribonucleoprotein, putative similar to transformer-SR
ribonucleoprotein [Nicotiana tabacum]
gi|1781299|emb|CAA70700
Length = 140
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = -1
Query: 688 SPSHTR*KNQCPTPLKYTLTAQCPSMSRS----QFRTPSRYQCPPLTPSRSTSRTQ*KRP 521
SP R ++ P+P K ++ S SRS + R+ SR P++PSRS R++ R
Sbjct: 4 SPQRRR-DSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRSR-SRS 61
Query: 520 CRSQLTSPST 491
S++ +P T
Sbjct: 62 RGSEVENPGT 71
>At4g31580.1 68417.m04485 splicing factor RSZp22 (RSZP22) / 9G8-like
SR protein (SRZ22) identical to RSZp22 protein
[Arabidopsis thaliana] gi|2582645|emb|CAA05352, 9G8-like
SR protein [Arabidopsis thaliana] GI:3435094; contains
Pfam profiles PF00076: RNA recognition motif. (a.k.a.
RRM, RBD, or RNP domain) and PF00098: Zinc knuckle;
identical to cDNA 9G8-like SR protein (SRZ22) GI:3435093
Length = 200
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 610 SRSQFRTPSRYQCPPLTPSRSTS-RTQ*KRPCRSQLTSPSTGHTQSTSRS 464
S+S+ RTP RY+ P RS S R + P R + SP +S SRS
Sbjct: 125 SKSRSRTPPRYRRSPSYGRRSYSPRARSPPPPRRRSPSPPPARGRSYSRS 174
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = -1
Query: 766 QVPSKGPCGQTLXPCIFPNQCLTPSRSPSHTR*KNQCPTPLKYTLTAQCPSMSRSQFRTP 587
QVP+ P + P Q TP ++P+ + +Q PTP + + Q PS + + P
Sbjct: 701 QVPTPSSSESYQAPNLSPVQAPTPVQAPTTSSETSQVPTP--SSESNQSPSQAPTPILEP 758
Query: 586 SRYQCPPLTPSRS 548
P P +S
Sbjct: 759 VHAPTPNSKPVQS 771
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,763,974
Number of Sequences: 28952
Number of extensions: 230009
Number of successful extensions: 778
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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