Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_N01
(783 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 343 6e-95
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 343 6e-95
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 343 6e-95
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 342 2e-94
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 342 2e-94
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 329 1e-90
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 242 2e-64
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 126 2e-29
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 125 4e-29
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 125 4e-29
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 125 4e-29
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 124 5e-29
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 124 7e-29
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 123 1e-28
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 123 2e-28
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 122 3e-28
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 63 2e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 60 2e-09
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.28
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.28
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 31 0.65
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 31 0.65
At2g40070.1 68415.m04923 expressed protein 31 1.1
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.5
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 4.6
At1g25180.1 68414.m03127 hypothetical protein 29 4.6
At1g25112.1 68414.m03120 hypothetical protein 29 4.6
At1g25025.1 68414.m03116 hypothetical protein 29 4.6
At1g24851.1 68414.m03110 hypothetical protein 29 4.6
At5g58300.1 68418.m07298 leucine-rich repeat transmembrane prote... 28 6.1
At3g22830.1 68416.m02877 heat shock transcription factor family ... 28 6.1
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 6.1
At1g68080.1 68414.m07777 expressed protein 28 6.1
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 6.1
At3g26855.1 68416.m03360 hypothetical protein 28 8.0
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 343 bits (844), Expect = 6e-95
Identities = 152/176 (86%), Positives = 167/176 (94%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGD
Sbjct: 263 PRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
VVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T
Sbjct: 323 VVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST 382
Query: 304 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 137
++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 383 SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = -2
Query: 782 YTNXDXXIGQIVSSIXXXLRXDGAXNVDLTEFQXNXV 672
YTN + + Q++SS+ LR DGA NVD+TEFQ N V
Sbjct: 224 YTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLV 260
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 343 bits (844), Expect = 6e-95
Identities = 152/176 (86%), Positives = 167/176 (94%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGD
Sbjct: 263 PRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
VVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T
Sbjct: 323 VVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST 382
Query: 304 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 137
++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 383 SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = -2
Query: 782 YTNXDXXIGQIVSSIXXXLRXDGAXNVDLTEFQXNXV 672
YTN + + Q++SS+ LR DGA NVD+TEFQ N V
Sbjct: 224 YTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLV 260
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 343 bits (844), Expect = 6e-95
Identities = 152/176 (86%), Positives = 167/176 (94%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGD
Sbjct: 263 PRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
VVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T
Sbjct: 323 VVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST 382
Query: 304 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 137
++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 383 SVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = -2
Query: 782 YTNXDXXIGQIVSSIXXXLRXDGAXNVDLTEFQXNXV 672
YTN + + Q++SS+ LR DGA NVD+TEFQ N V
Sbjct: 224 YTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLV 260
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 342 bits (840), Expect = 2e-94
Identities = 152/176 (86%), Positives = 164/176 (93%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PRIHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGD
Sbjct: 263 PRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
VVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN T
Sbjct: 323 VVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNT 382
Query: 304 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 137
A+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 383 AVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = -2
Query: 782 YTNXDXXIGQIVSSIXXXLRXDGAXNVDLTEFQXNXV 672
YTN + I QI+SS+ LR DGA NVD+TEFQ N V
Sbjct: 224 YTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLV 260
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 342 bits (840), Expect = 2e-94
Identities = 152/176 (86%), Positives = 164/176 (93%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PRIHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++YRGD
Sbjct: 263 PRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
VVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN T
Sbjct: 323 VVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNT 382
Query: 304 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 137
A+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 383 AVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = -2
Query: 782 YTNXDXXIGQIVSSIXXXLRXDGAXNVDLTEFQXNXV 672
YTN + I QI+SS+ LR DGA NVD+TEFQ N V
Sbjct: 224 YTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLV 260
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 329 bits (809), Expect = 1e-90
Identities = 145/174 (83%), Positives = 159/174 (91%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PRIHF L +YAPVIS+ KAYHEQ SV EIT + FEP+N M KCDPRHGKYMACC++YRGD
Sbjct: 263 PRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGD 322
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
VVPKDVN A+A IK KRTIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN T
Sbjct: 323 VVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNT 382
Query: 304 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 143
A+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 383 AVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -2
Query: 782 YTNXDXXIGQIVSSIXXXLRXDGAXNVDLTEFQXNXV 672
Y+N + I Q +SS+ LR DGA NVD+TEFQ N V
Sbjct: 224 YSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLV 260
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 242 bits (592), Expect = 2e-64
Identities = 106/124 (85%), Positives = 117/124 (94%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++YRGD
Sbjct: 263 PRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGD 322
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
VVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T
Sbjct: 323 VVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNST 382
Query: 304 AIAE 293
++AE
Sbjct: 383 SVAE 386
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = -2
Query: 782 YTNXDXXIGQIVSSIXXXLRXDGAXNVDLTEFQXNXV 672
YTN + + Q++SS+ LR DGA NVD+TEFQ N V
Sbjct: 224 YTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLV 260
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 126 bits (304), Expect = 2e-29
Identities = 58/172 (33%), Positives = 98/172 (56%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 262 PRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 321
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
+ K+V+ I ++ K + FV+W P K + PPT ++ A + N+T
Sbjct: 322 MSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT--------GIKMASTFVGNST 373
Query: 304 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 149
+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 374 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 125 bits (301), Expect = 4e-29
Identities = 57/172 (33%), Positives = 98/172 (56%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGK 320
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
+ K+V+ + ++ K + FV+W P K + PPT ++ A + N+T
Sbjct: 321 MSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNST 372
Query: 304 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 149
+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 125 bits (301), Expect = 4e-29
Identities = 57/172 (33%), Positives = 98/172 (56%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGK 320
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
+ K+V+ + ++ K + FV+W P K + PPT ++ A + N+T
Sbjct: 321 MSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNST 372
Query: 304 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 149
+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 125 bits (301), Expect = 4e-29
Identities = 57/172 (33%), Positives = 98/172 (56%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 320
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
+ K+V+ + ++ K + FV+W P K + PPT ++ A + N+T
Sbjct: 321 MSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNST 372
Query: 304 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 149
+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 124 bits (300), Expect = 5e-29
Identities = 57/172 (33%), Positives = 98/172 (56%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGK 320
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
+ K+V+ + ++ K + FV+W P K + PPT ++ A + N+T
Sbjct: 321 MSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNST 372
Query: 304 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 149
+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 124 bits (299), Expect = 7e-29
Identities = 58/172 (33%), Positives = 97/172 (56%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 262 PRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQ 321
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
+ K+V+ I I+ K + FV+W P K + PP ++ A + N+T
Sbjct: 322 MSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPP--------KGLKMAATFVGNST 373
Query: 304 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 149
+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 374 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 425
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 123 bits (297), Expect = 1e-28
Identities = 58/172 (33%), Positives = 98/172 (56%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PR+HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGK 320
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
+ K+V+ + I+ K + FV+W P K + + P G ++ A + N+T
Sbjct: 321 LSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSV----CDIAPKG----LKMASTFIGNST 372
Query: 304 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 149
+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 123 bits (296), Expect = 2e-28
Identities = 57/172 (33%), Positives = 98/172 (56%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PR+HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGK 320
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
+ K+V+ + ++ K + FV+W P K + + P G ++ A + N+T
Sbjct: 321 MSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSV----CDIAPTG----LKMASTFIGNST 372
Query: 304 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 149
+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 122 bits (294), Expect = 3e-28
Identities = 56/172 (32%), Positives = 97/172 (56%)
Frame = -3
Query: 664 PRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGD 485
PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ ++RG
Sbjct: 261 PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGK 320
Query: 484 VVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 305
+ K+V+ + ++ K + FV+W P K + + P G + A + N+T
Sbjct: 321 MSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV----CDIAPRG----LSMASTFIGNST 372
Query: 304 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 149
+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 373 SIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.9 bits (146), Expect = 2e-10
Identities = 44/182 (24%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Frame = -3
Query: 667 TPRIHFPLVTYAPVISAEKA-YHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMAC 506
TPR HF + Y P+ +A + +V ++ + N MV R+ KY++
Sbjct: 263 TPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISI 322
Query: 505 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 326
+ +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V ++ +
Sbjct: 323 LNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGL---- 378
Query: 325 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKD 158
ML++ T+I ++R ++D + K+AF+ Y M + EF E+R+ + +L +
Sbjct: 379 -MLASHTSIRHLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDE 437
Query: 157 YE 152
Y+
Sbjct: 438 YK 439
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 60.1 bits (139), Expect = 2e-09
Identities = 42/182 (23%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Frame = -3
Query: 667 TPRIHFPLVTYAPVISAEKA-YHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMAC 506
TPR HF + Y P+ +A + +V ++ + N MV R+ KY++
Sbjct: 263 TPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISI 322
Query: 505 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 326
+ +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V ++ +
Sbjct: 323 LNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGL---- 378
Query: 325 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKD 158
ML++ T+I +++ ++D + K+AF+ Y M + EF E+R+ + +L +
Sbjct: 379 -MLASHTSIRHLFSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDE 437
Query: 157 YE 152
Y+
Sbjct: 438 YK 439
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 282 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 175
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 458 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 565
GRV I Y D + + H H L TG+ HH+ G++
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 31.5 bits (68), Expect = 0.65
Identities = 34/111 (30%), Positives = 43/111 (38%)
Frame = -1
Query: 699 PHRVPX*XGALPPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMA 520
P P A PPV+TS T P S P P S A+ PP + P +A
Sbjct: 41 PAATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVA--SPPPPVA 98
Query: 519 STWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPP 367
S A V T P L S P+ + + +P S S S +S PP
Sbjct: 99 SPPPATPPPVATPPP-----APLASPPAQVPAPAPTTKPDSPSPSPSSSPP 144
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 31.5 bits (68), Expect = 0.65
Identities = 34/111 (30%), Positives = 43/111 (38%)
Frame = -1
Query: 699 PHRVPX*XGALPPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMA 520
P P A PPV+TS T P S P P S A+ PP + P +A
Sbjct: 41 PAATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVA--SPPPPVA 98
Query: 519 STWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPP 367
S A V T P L S P+ + + +P S S S +S PP
Sbjct: 99 SPPPATPPPVATPPP-----APLASPPAQVPAPAPTTKPDSPSPSPSSSPP 144
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 30.7 bits (66), Expect = 1.1
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Frame = -1
Query: 663 PVSTS-HWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVV 487
P+S S S +R + +PT ++ S S T S+P T +A P ++T L+ T
Sbjct: 237 PMSRSTSLSSSRLTPTASKPTTSTARSAGSVTR-STPSTTTKSAGPSRSTTPLSRS-TAR 294
Query: 486 TSYPRM*TRPSLPSKPSVLSNSSTGVQPV-SRSVSTTSHPP 367
+S P +RP+LP ++ +S+ +P+ S S +TT+ P
Sbjct: 295 SSTPT--SRPTLPPSKTISRSSTPTRRPIASASAATTTANP 333
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 377 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 481
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 154 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 270
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At1g25180.1 68414.m03127 hypothetical protein
Length = 258
Score = 28.7 bits (61), Expect = 4.6
Identities = 26/92 (28%), Positives = 38/92 (41%)
Frame = -1
Query: 672 ALPPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCT 493
++PP S +R Q + P+ P + F S S H S + +++S +
Sbjct: 163 SIPPAGPSQTAR--QLTRPKYPA-SRFVSSSSSAHPSQAARQLTRLKQLVSSPVSSSSSA 219
Query: 492 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVS 397
R TRP PS+LSNS T VS
Sbjct: 220 HPYQAARQLTRPKYLVCPSILSNSFTRPSEVS 251
>At1g25112.1 68414.m03120 hypothetical protein
Length = 258
Score = 28.7 bits (61), Expect = 4.6
Identities = 26/92 (28%), Positives = 38/92 (41%)
Frame = -1
Query: 672 ALPPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCT 493
++PP S +R Q + P+ P + F S S H S + +++S +
Sbjct: 163 SIPPAGPSQTAR--QLTRPKYPA-SRFVSSSSSAHPSQAARQLTRLKQLVSSPVSSSSSA 219
Query: 492 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVS 397
R TRP PS+LSNS T VS
Sbjct: 220 HPYQAARQLTRPKYLVCPSILSNSFTRPSEVS 251
>At1g25025.1 68414.m03116 hypothetical protein
Length = 258
Score = 28.7 bits (61), Expect = 4.6
Identities = 26/92 (28%), Positives = 38/92 (41%)
Frame = -1
Query: 672 ALPPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCT 493
++PP S +R Q + P+ P + F S S H S + +++S +
Sbjct: 163 SIPPAGPSQTAR--QLTRPKYPA-SRFVSSSSSAHPSQAARQLTRLKQLVSSPVSSSSSA 219
Query: 492 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVS 397
R TRP PS+LSNS T VS
Sbjct: 220 HPYQAARQLTRPKYLVCPSILSNSFTRPSEVS 251
>At1g24851.1 68414.m03110 hypothetical protein
Length = 258
Score = 28.7 bits (61), Expect = 4.6
Identities = 26/92 (28%), Positives = 38/92 (41%)
Frame = -1
Query: 672 ALPPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCT 493
++PP S +R Q + P+ P + F S S H S + +++S +
Sbjct: 163 SIPPAGPSQTAR--QLTRPKYPA-SRFVSSSSSAHPSQAARQLTRLKQLVSSPVSSSSSA 219
Query: 492 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVS 397
R TRP PS+LSNS T VS
Sbjct: 220 HPYQAARQLTRPKYLVCPSILSNSFTRPSEVS 251
>At5g58300.1 68418.m07298 leucine-rich repeat transmembrane protein
kinase, putative
Length = 654
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -1
Query: 690 VPX*XGALPPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPP 553
+P G P S+S T LP +P S P P H S+PP
Sbjct: 220 IPSALGGFP--SSSFSGNTLLCGLPLQPCATSSPPPSLTPHISTPP 263
>At3g22830.1 68416.m02877 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 406
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 666 PPVSTSH-WSRTRQSSLPRRPTMNSFPSPRSQTHASSPP 553
PP S+S+ +S + + PT S+P P H S PP
Sbjct: 22 PPSSSSYLYSSSMAEAAINDPTTLSYPQPLEGLHESGPP 60
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 493 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 350
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 419 DELDSTLGFDGSDGRVHILGYDVTTVQ 499
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +1
Query: 67 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 228
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 229 TSA 237
+S+
Sbjct: 361 SSS 363
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 261 SCTPSVLSCTGTSVRVWRRESSPK 190
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,913,320
Number of Sequences: 28952
Number of extensions: 364034
Number of successful extensions: 1446
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1755792000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -