Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_M23
         (817 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600...    30   1.9  
09_04_0152 - 15168285-15168733,15168813-15170712,15171653-15171757     30   1.9  
05_07_0148 + 28024820-28025293,28025655-28025702,28026034-280260...    30   1.9  
01_01_0953 - 7472173-7472178,7472216-7472311,7472370-7472462,747...    30   2.5  
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880...    29   5.8  
09_03_0006 + 11426346-11426420,11426733-11427452                       29   5.8  
02_01_0503 + 3669758-3670059,3670351-3670870                           29   5.8  

>10_08_0558 +
           18756797-18756887,18757189-18757262,18759881-18760069,
           18760190-18760309,18760457-18760521,18760684-18760828,
           18761304-18763337,18763904-18764025,18764127-18764309,
           18764635-18764690,18765086-18765141
          Length = 1044

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
 Frame = -2

Query: 570 CKVFLHLLDTDKESNIKAVCQLLKLSGLALDADCPTGMHATFERLRRRGSLPLVRAVLDL 391
           C   L ++ +D E+N++++   L+     L+AD    M A  E+ +R      ++A   L
Sbjct: 595 CSAHLSII-SDLEANVESLENELQEQSKRLEADIQEVMRAKVEQEQR-----AIKAEESL 648

Query: 390 RAARWGLADTSHQHVGGMNGGSDYVEGGFLADGHSL--TAEERAFLQ 256
           R ARW  A T+ +        S  V   F A+   L    +E A LQ
Sbjct: 649 RKARWNNATTAERLQEEFKMLSSQVSSAFSANEQLLMQARKEAAELQ 695


>09_04_0152 - 15168285-15168733,15168813-15170712,15171653-15171757
          Length = 817

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
 Frame = -2

Query: 399 LDLRAARWGLADTSHQHVGGMNGGSDYVEGGFLADGHSL-----TAEERAFLQSN 250
           LD  AA  G AD S +H+    GG D  +G +  + H+L     T     F+Q+N
Sbjct: 342 LDAAAASPGDADGSRRHIVSFIGGIDLCDGRYDDENHTLFRDLDTTYRHDFMQNN 396


>05_07_0148 +
           28024820-28025293,28025655-28025702,28026034-28026080,
           28026334-28026496,28026595-28026656,28026820-28027003,
           28027093-28027182,28027553-28027686,28027747-28027936,
           28028103-28029033,28029860-28030065
          Length = 842

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = -2

Query: 420 LPLVRAVLDLRAA--RWGLADTSHQHVGGMNGGSDYVEGGFLADGHSLTAE 274
           LP  RAVLDL AA   W     +H  VG    G D V    +   HSLT +
Sbjct: 40  LPTARAVLDLCAAPGGWVQVAVNHAPVGAFVVGVDLVPIRPIRGAHSLTED 90


>01_01_0953 - 7472173-7472178,7472216-7472311,7472370-7472462,
            7472855-7473019,7473689-7474821,7474902-7475426,
            7477077-7477249,7478737-7478831,7478893-7481688
          Length = 1693

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
 Frame = -2

Query: 678  ETSEENMRGFAMFLAEXYTQLEDSQG---GRIKTLGESLCKVFLHLLDTDKESNIKAVCQ 508
            ET  EN       L +   +L +      GR+ TL  SLCK     +   K+  IK    
Sbjct: 1498 ETRAENAESKCTLLTDTNLELSEELSFLRGRVDTLENSLCKANQLKMSAAKDIGIKTKTI 1557

Query: 507  LLKLSGLALDADC 469
               ++ LAL+ +C
Sbjct: 1558 TDLVAKLALEREC 1570


>12_01_0906 +
           8799284-8799441,8800865-8801690,8801933-8802055,
           8802144-8802210,8802611-8802714,8802798-8802900,
           8803103-8803401,8804009-8804263,8805471-8805776,
           8805866-8806194,8806829-8806916,8807027-8807164,
           8807438-8807458
          Length = 938

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 552 LLDTDKESNIKAVCQLLKLSGLALDADCPTGMHATFERLR 433
           LL+   + +++     +K  G  L    P G+HA FER R
Sbjct: 359 LLENPTDDSVEVAVGFVKECGAMLQDLSPQGLHAIFERFR 398


>09_03_0006 + 11426346-11426420,11426733-11427452
          Length = 264

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 26/90 (28%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
 Frame = +1

Query: 241 RRQVALQEGALLGGQRVTVRQETALYVIRPAVHAANVLVRGVGEPPAGRAQVEHGAHERQ 420
           RR  AL+        R   R+ T L  +   V     L      PP  R  V H   +  
Sbjct: 64  RRPPALRRCCAAWRHRTRKRRRTRLCSL--LVTGVVDLCSDSASPPVLRLAVGHRCPDSS 121

Query: 421 RPAPPEPLERRVH---PRRAVRVEGQTRQL 501
            P+PP+P   R H   P  A+   G+T  L
Sbjct: 122 APSPPQPGALRWHRRPPSTALPPHGETAPL 151


>02_01_0503 + 3669758-3670059,3670351-3670870
          Length = 273

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 400 HGAHERQRPAPPEPLERRVHPRRA 471
           H AH  Q   PP P  RR+ PR A
Sbjct: 8   HAAHRSQIEIPPRPPSRRLPPRTA 31


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,669,688
Number of Sequences: 37544
Number of extensions: 405638
Number of successful extensions: 1529
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)