Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_M23
         (817 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    30   2.3  
Z81592-9|CAB63315.1|  945|Caenorhabditis elegans Hypothetical pr...    29   4.0  
U44759-1|AAA86906.1|  405|Caenorhabditis elegans troponin T prot...    29   5.3  
U43282-4|AAA83615.1|  405|Caenorhabditis elegans Muscle position...    29   5.3  
Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical pr...    28   9.2  
AL034393-13|CAA22317.1|  340|Caenorhabditis elegans Hypothetical...    28   9.2  

>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +1

Query: 376  PAGRAQVEHG--AHERQRPAPPEPLE-RRVHPRRAVRVEGQTRQLEQLT 513
            PAG+  V  G  ++E   PAPP+P+E  +V P   +  E   +Q+ Q T
Sbjct: 3212 PAGKT-VRFGPISYEPPEPAPPQPVEIPKVEPTPEISFESLAQQMAQKT 3259


>Z81592-9|CAB63315.1|  945|Caenorhabditis elegans Hypothetical protein
            T16G1.9 protein.
          Length = 945

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +1

Query: 121  LIRYLEKLEEALLHFRIHSSLPRVVLKLLQYIVVYGLVLVRRQVALQEGALLGGQRVTV 297
            L+ Y   L   L   R+ + L  +V KL QY+ VYG   + R+ + +EG      RV V
Sbjct: 825  LLPYSYDLALVLEEIRLVTELMVLVSKLGQYMCVYGSQPIDRKKSFEEGLPYSPGRVGV 883


>U44759-1|AAA86906.1|  405|Caenorhabditis elegans troponin T
           protein.
          Length = 405

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 352 LVRGVGEPPA--GRAQVEHGAHERQRPAPPEPLER-RVHPRRA 471
           LVRG G PPA  GR Q E     R+   PP+ +E+ +V   RA
Sbjct: 331 LVRGTGRPPAEWGRKQNEELEQIRKNLEPPKYVEQVKVEGARA 373


>U43282-4|AAA83615.1|  405|Caenorhabditis elegans Muscle positioning
           protein 2 protein.
          Length = 405

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 352 LVRGVGEPPA--GRAQVEHGAHERQRPAPPEPLER-RVHPRRA 471
           LVRG G PPA  GR Q E     R+   PP+ +E+ +V   RA
Sbjct: 331 LVRGTGRPPAEWGRKQNEELEQIRKNLEPPKYVEQVKVEGARA 373


>Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical
           protein F33H1.4 protein.
          Length = 1385

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 373 PPAGRAQVEHGAHERQRPAPPEPLERRVHPRRAV 474
           PP   A + + A+ R RPA P P  RR  P+  V
Sbjct: 253 PPPAPAHLANKANSRGRPANPIPPHRRPVPKDLV 286


>AL034393-13|CAA22317.1|  340|Caenorhabditis elegans Hypothetical
           protein Y18D10A.17 protein.
          Length = 340

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 357 HQHVGGMNGGSDYVEGGFLADGHS 286
           HQH GG NGG     GG+   G++
Sbjct: 303 HQHRGGYNGGYRQNNGGYRRGGYA 326


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,622,022
Number of Sequences: 27780
Number of extensions: 297785
Number of successful extensions: 953
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)