Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_M22
         (822 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020...    29   5.9  
08_02_0669 + 19868149-19870179                                         28   7.8  
07_03_1461 - 26700613-26700621,26700784-26700851,26701778-267019...    28   7.8  
05_05_0147 + 22715144-22715444,22716245-22716407,22716484-227165...    28   7.8  
04_03_0714 + 18986706-18987257                                         28   7.8  
02_04_0458 - 23102262-23102377,23102505-23102661,23103094-231041...    28   7.8  
01_01_0799 + 6219914-6220051,6220602-6220883                           28   7.8  

>03_02_0829 -
           11599665-11600364,11600853-11601076,11601786-11602000,
           11602300-11602377,11602593-11603907
          Length = 843

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +3

Query: 129 FRATSSRPGCC*VVTVENARTGTTILSLTATKHTRVLVSRAEHAVVSTSSVHLPPGGP 302
           FR    + G   V+T+E        + +TAT  T  LV +A H +  +S+   PPG P
Sbjct: 110 FRINHMKSGGNPVMTIEEK----VPVPVTATLQTSSLVPKAVHDLDDSSTFEAPPGTP 163


>08_02_0669 + 19868149-19870179
          Length = 676

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 341 IYVLLHDDGRTGSRPAWW*VDRACRHHSVFRP 246
           +Y L+ D G  GS+ A W V+   RH+   +P
Sbjct: 631 LYALIADGGAQGSKKARWLVNEIHRHYEQRQP 662


>07_03_1461 -
           26700613-26700621,26700784-26700851,26701778-26701919,
           26702011-26702318,26702415-26702481,26702543-26702664,
           26702763-26702815,26702924-26703006,26703092-26703160,
           26703235-26703633
          Length = 439

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 204 LSLTATKHTRVLVSRAEHAVVSTSSVHLPPGGPRACPP 317
           +++ A+ H   L SR +       + HL PG P A PP
Sbjct: 28  IAVAASDHPAALRSRRDAIAERLYTAHLVPGAPPAGPP 65


>05_05_0147 +
           22715144-22715444,22716245-22716407,22716484-22716532,
           22716626-22716739,22716812-22717234,22717307-22717693,
           22717777-22717872,22717978-22718093,22718137-22718272,
           22718392-22718480,22718586-22718736,22719057-22719185,
           22719276-22719354,22719435-22719544
          Length = 780

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 436 NSCCVFIFVFWKFRWELSMWWI*VNIRFSLFKFM 335
           N    FI   WK  W LS+W I +NI   ++KF+
Sbjct: 255 NKTVDFIHENWKRIWVLSLWAI-LNIALFMYKFV 287


>04_03_0714 + 18986706-18987257
          Length = 183

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -2

Query: 233 ASMFSGGKR*DSGAGPRVLDCDHLTTAGPRARRSEVKAA 117
           A +  GG   DS  G   LD D   + GP  RR +  AA
Sbjct: 38  AGLGGGGGSVDSSGGAAALDLDLSMSIGPTTRRQQPAAA 76


>02_04_0458 -
           23102262-23102377,23102505-23102661,23103094-23104140,
           23104357-23104500,23105389-23105457
          Length = 510

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -3

Query: 289 GKWTELVDTTACSARETKTRVCLVAVRDRIVVPV 188
           G W++L   T C   E  TRV  V VR R+ VP+
Sbjct: 453 GVWSQL---TVCKQPEQTTRVVAVIVRVRLFVPL 483


>01_01_0799 + 6219914-6220051,6220602-6220883
          Length = 139

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 288 PPGGPRACPPVVV*QNINLNKEKRIFTYIHHIDNSQRNFQKTK 416
           P GG ++       ++ N NK K+  TYI  +  +QRN Q+T+
Sbjct: 91  PTGGSKSMSMHQQQKSKNQNKAKQARTYIDQLHLAQRNSQQTQ 133


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,419,893
Number of Sequences: 37544
Number of extensions: 331091
Number of successful extensions: 761
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)