Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_M22
         (822 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41266-1|AAM48565.1|  521|Caenorhabditis elegans Zinc metallopro...    30   2.3  
AB007817-1|BAA28353.1|  521|Caenorhabditis elegans matrix metall...    30   2.3  
Z82288-5|CAB05324.1|  380|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U46669-6|AAM51526.1|  514|Caenorhabditis elegans Hypothetical pr...    29   4.0  
U46669-5|AAA85746.3|  493|Caenorhabditis elegans Hypothetical pr...    29   4.0  
U46669-4|AAQ65208.1|  557|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical pr...    29   5.3  
U00025-3|AAA50619.1|  804|Caenorhabditis elegans Hypothetical pr...    29   5.3  
AB110823-1|BAD80738.1|  804|Caenorhabditis elegans chondroitin p...    29   5.3  

>U41266-1|AAM48565.1|  521|Caenorhabditis elegans Zinc
           metalloprotease protein 1 protein.
          Length = 521

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 313 GQARGPPGGKWTELVDTTACSARETKTRVCLVAVR 209
           G+   PP  KW E + T  C A  T TR+ L  +R
Sbjct: 93  GKRYAPPQFKWKEKIITYGCKAVGTSTRISLDDLR 127


>AB007817-1|BAA28353.1|  521|Caenorhabditis elegans matrix
           metalloproteinase protein.
          Length = 521

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 313 GQARGPPGGKWTELVDTTACSARETKTRVCLVAVR 209
           G+   PP  KW E + T  C A  T TR+ L  +R
Sbjct: 93  GKRYAPPQFKWKEKIITYGCKAVGTSTRISLDDLR 127


>Z82288-5|CAB05324.1|  380|Caenorhabditis elegans Hypothetical
           protein ZK896.7 protein.
          Length = 380

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 171 TVENARTGTTILSLTATKHTRVLVSRAEHAVVSTSSVHLPP-GGPRACP 314
           T   A T TT+   T T  T +   +    V +T++  +PP   P+ACP
Sbjct: 164 TTTRAPTTTTVRKTTQTTATTMTTPKPTTTVSTTTTTTVPPTTTPKACP 212


>U46669-6|AAM51526.1|  514|Caenorhabditis elegans Hypothetical
           protein C41G11.4b protein.
          Length = 514

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -3

Query: 451 EIVINNSCCVFIFVF--WKFRWELSMWWI*VNIRFSLFKFM 335
           +I ++ + C+ +F++   +F W  S WW   +I   LFKF+
Sbjct: 63  KISLSVADCIVLFIYAPTQFAWIHSYWWFGGDIGCRLFKFI 103


>U46669-5|AAA85746.3|  493|Caenorhabditis elegans Hypothetical
           protein C41G11.4a protein.
          Length = 493

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -3

Query: 451 EIVINNSCCVFIFVF--WKFRWELSMWWI*VNIRFSLFKFM 335
           +I ++ + C+ +F++   +F W  S WW   +I   LFKF+
Sbjct: 63  KISLSVADCIVLFIYAPTQFAWIHSYWWFGGDIGCRLFKFI 103


>U46669-4|AAQ65208.1|  557|Caenorhabditis elegans Hypothetical
           protein C41G11.4c protein.
          Length = 557

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -3

Query: 451 EIVINNSCCVFIFVF--WKFRWELSMWWI*VNIRFSLFKFM 335
           +I ++ + C+ +F++   +F W  S WW   +I   LFKF+
Sbjct: 63  KISLSVADCIVLFIYAPTQFAWIHSYWWFGGDIGCRLFKFI 103


>Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical
           protein T21B6.3 protein.
          Length = 821

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
 Frame = -3

Query: 301 GPPGGKWTELVDTTACSAR-----ETKTRVCL 221
           GPP  +WTE  + + CS++      T+TR CL
Sbjct: 648 GPPCAEWTEWCEWSGCSSKCGPGQRTRTRGCL 679


>U00025-3|AAA50619.1|  804|Caenorhabditis elegans Hypothetical
           protein PAR2.4a protein.
          Length = 804

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 177 ENARTGTTILSLTATKHTRVLVSRAEHAVVSTSSVHLPPGGPRACPPV 320
           +N  T T +L  +A +  RV    +EH +V    +  PP    A P V
Sbjct: 45  QNQETETNVLEPSALEKGRVYKDLSEHWIVHQDDMPAPPHNQDATPKV 92


>AB110823-1|BAD80738.1|  804|Caenorhabditis elegans chondroitin
           polymerizing factor protein.
          Length = 804

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 177 ENARTGTTILSLTATKHTRVLVSRAEHAVVSTSSVHLPPGGPRACPPV 320
           +N  T T +L  +A +  RV    +EH +V    +  PP    A P V
Sbjct: 45  QNQETETNVLEPSALEKGRVYKDLSEHWIVHQDDMPAPPHNQDATPKV 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,251,674
Number of Sequences: 27780
Number of extensions: 260065
Number of successful extensions: 529
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)