BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_M18 (832 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF039053-5|AAC25875.2| 293|Caenorhabditis elegans Serpentine re... 31 1.3 Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 29 4.1 AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 29 4.1 AL110498-3|CAB54470.1| 846|Caenorhabditis elegans Hypothetical ... 28 9.4 >AF039053-5|AAC25875.2| 293|Caenorhabditis elegans Serpentine receptor, class bc (class b-like) protein 23 protein. Length = 293 Score = 30.7 bits (66), Expect = 1.3 Identities = 16/68 (23%), Positives = 30/68 (44%) Frame = +2 Query: 371 HYYCKRNDNVSVPKECFSYLLSLGQI*HT*TQKSYFIVFHITFILHTNTHADLSWKSFES 550 +Y+C N ++ P+ C + S+ KS ++F +TF + L WK F+ Sbjct: 146 YYFC--NFELTFPRNCLTIGCSINACSSRFWTKSKLVIFVLTFSFAALLSSKLLWKVFKK 203 Query: 551 QQHAYNSS 574 +N + Sbjct: 204 DNKDFNKA 211 >Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical protein H06O01.1 protein. Length = 488 Score = 29.1 bits (62), Expect = 4.1 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = -1 Query: 658 RDFIKYVSEXATSELKGWDRKGNAKXR 578 +DF+ ++S+ +T LKG+ R G K + Sbjct: 459 KDFVSFISKHSTDGLKGFSRDGKKKKK 485 >AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. Length = 488 Score = 29.1 bits (62), Expect = 4.1 Identities = 10/27 (37%), Positives = 18/27 (66%) Frame = -1 Query: 658 RDFIKYVSEXATSELKGWDRKGNAKXR 578 +DF+ ++S+ +T LKG+ R G K + Sbjct: 459 KDFVSFISKHSTDGLKGFSRDGKKKKK 485 >AL110498-3|CAB54470.1| 846|Caenorhabditis elegans Hypothetical protein Y64G10A.6 protein. Length = 846 Score = 27.9 bits (59), Expect = 9.4 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = +3 Query: 165 TQHMTTLAIFIKMFIISLPKGLKCYHTFVPRYTESN 272 T +T AI +FI+S+ GLKCY F + SN Sbjct: 418 TYAITGGAIIAILFILSVCAGLKCYKKFNNKKKASN 453 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,661,015 Number of Sequences: 27780 Number of extensions: 338480 Number of successful extensions: 907 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 850 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 907 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 2061488408 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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