BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_M16 (841 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 29 1.1 SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr ... 28 1.4 SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 27 2.5 SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 27 4.4 SPBC16A3.03c |lyn1||sequence orphan|Schizosaccharomyces pombe|ch... 26 7.6 >SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1|||Manual Length = 3227 Score = 28.7 bits (61), Expect = 1.1 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -3 Query: 161 FVKKTNKTLTIALKLIFDMGIINSSKTSI 75 F+ +T+KTL +ALK FDM N+S + + Sbjct: 1070 FMSETSKTLNMALKSEFDMTDFNNSGSKL 1098 >SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 977 Score = 28.3 bits (60), Expect = 1.4 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +3 Query: 414 ETFSLADSSSGAKRIFNTHFLDSESERPDSLSETLNAFLTENCNYHYSNVSL 569 E+ S + SSS KR+F H ES +S+ + A + +YSNVS+ Sbjct: 221 ESVSFSSSSSVIKRMFKEH----ESVLRNSMDDFHTAISSSEIELNYSNVSV 268 >SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizosaccharomyces pombe|chr 1|||Manual Length = 927 Score = 27.5 bits (58), Expect = 2.5 Identities = 19/57 (33%), Positives = 28/57 (49%) Frame = +3 Query: 411 PETFSLADSSSGAKRIFNTHFLDSESERPDSLSETLNAFLTENCNYHYSNVSLLLDI 581 P ++A+ SS +R +T D E P SLS+T ++ YH N S+ DI Sbjct: 588 PIANAMAELSSSMRRRQSTSVDD---EAPVSLSKTSSSTRLNGLGYHSRNTSIASDI 641 >SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 2111 Score = 26.6 bits (56), Expect = 4.4 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = +3 Query: 102 PHIKNKFKGDCERFVSFFYEIS 167 P ++ KF+G E V+FFY ++ Sbjct: 1212 PELRKKFEGQPEHVVNFFYYVA 1233 >SPBC16A3.03c |lyn1||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 658 Score = 25.8 bits (54), Expect = 7.6 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +1 Query: 538 TATTIIQMSLCYWISFNAISARLFFFE 618 T T++ S+CYW+ N A LF E Sbjct: 479 TTNTVLAKSICYWL--NDAMALLFLLE 503 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,929,359 Number of Sequences: 5004 Number of extensions: 58123 Number of successful extensions: 128 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 126 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 414453330 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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