Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_M15
(783 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 352 1e-97
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 352 1e-97
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 352 1e-97
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 351 4e-97
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 351 4e-97
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 338 2e-93
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 251 5e-67
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 133 1e-31
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 132 3e-31
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 132 3e-31
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 132 3e-31
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 131 4e-31
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 131 6e-31
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 130 1e-30
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 130 1e-30
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 129 2e-30
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 66 3e-11
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 63 2e-10
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.28
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.28
At2g40070.1 68415.m04923 expressed protein 33 0.28
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.5
At1g62870.1 68414.m07099 expressed protein 29 2.6
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 4.6
At3g11690.1 68416.m01433 expressed protein 28 6.1
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 6.1
At1g68080.1 68414.m07777 expressed protein 28 6.1
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 6.1
At3g26855.1 68416.m03360 hypothetical protein 28 8.0
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 352 bits (866), Expect = 1e-97
Identities = 156/180 (86%), Positives = 171/180 (95%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
LVPYPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLM 318
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMI 378
Query: 314 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 135
SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 379 SNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/44 (52%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 780 PTYTNXXVSXTD-FSSITASLRFDGALNVTSPSSRLTCALPPYP 652
PTYTN + SS+TASLRFDGALNV + L PYP
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNV--DVTEFQTNLVPYP 263
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 352 bits (866), Expect = 1e-97
Identities = 156/180 (86%), Positives = 171/180 (95%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
LVPYPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLM 318
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMI 378
Query: 314 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 135
SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 379 SNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/44 (52%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 780 PTYTNXXVSXTD-FSSITASLRFDGALNVTSPSSRLTCALPPYP 652
PTYTN + SS+TASLRFDGALNV + L PYP
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNV--DVTEFQTNLVPYP 263
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 352 bits (866), Expect = 1e-97
Identities = 156/180 (86%), Positives = 171/180 (95%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
LVPYPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLM 318
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMI 378
Query: 314 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 135
SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 379 SNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/44 (52%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 780 PTYTNXXVSXTD-FSSITASLRFDGALNVTSPSSRLTCALPPYP 652
PTYTN + SS+TASLRFDGALNV + L PYP
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNV--DVTEFQTNLVPYP 263
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 351 bits (862), Expect = 4e-97
Identities = 156/180 (86%), Positives = 168/180 (93%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
LVPYPRIHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLM 318
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMI 378
Query: 314 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 135
SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 379 SNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 35.5 bits (78), Expect = 0.040
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 780 PTYTNXXVSXTDF-SSITASLRFDGALNVTSPSSRLTCALPPYP 652
PTYTN + SS+T SLRFDGA+NV + L PYP
Sbjct: 222 PTYTNLNRLISQIISSLTTSLRFDGAINV--DITEFQTNLVPYP 263
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 351 bits (862), Expect = 4e-97
Identities = 156/180 (86%), Positives = 168/180 (93%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
LVPYPRIHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLM 318
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMI 378
Query: 314 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 135
SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 379 SNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
Score = 35.5 bits (78), Expect = 0.040
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -1
Query: 780 PTYTNXXVSXTDF-SSITASLRFDGALNVTSPSSRLTCALPPYP 652
PTYTN + SS+T SLRFDGA+NV + L PYP
Sbjct: 222 PTYTNLNRLISQIISSLTTSLRFDGAINV--DITEFQTNLVPYP 263
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 338 bits (831), Expect = 2e-93
Identities = 149/178 (83%), Positives = 163/178 (91%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
LVPYPRIHF L +YAPVIS+ KAYHEQ SV EIT + FEP+N M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLM 318
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
YRGDVVPKDVN A+A IK KRTIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMI 378
Query: 314 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 141
SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 379 SNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436
Score = 35.1 bits (77), Expect = 0.053
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -1
Query: 780 PTYTNXX--VSXTDFSSITASLRFDGALNVTSPSSRLTCALPPYP 652
PTY+N +S T SS+T SLRFDGA+NV + L PYP
Sbjct: 222 PTYSNLNRLISQT-ISSLTTSLRFDGAINV--DITEFQTNLVPYP 263
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 251 bits (614), Expect = 5e-67
Identities = 110/128 (85%), Positives = 121/128 (94%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
LVPYPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLM 318
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMI 378
Query: 314 SNTTAIAE 291
SN+T++AE
Sbjct: 379 SNSTSVAE 386
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/44 (52%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 780 PTYTNXXVSXTD-FSSITASLRFDGALNVTSPSSRLTCALPPYP 652
PTYTN + SS+TASLRFDGALNV + L PYP
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNV--DVTEFQTNLVPYP 263
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 133 bits (321), Expect = 1e-31
Identities = 60/176 (34%), Positives = 102/176 (57%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 258 LIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAM 317
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
+RG + K+V+ I ++ K + FV+W P K + PPT ++ A +
Sbjct: 318 FRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT--------GIKMASTFV 369
Query: 314 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 147
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 370 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 132 bits (318), Expect = 3e-31
Identities = 59/176 (33%), Positives = 102/176 (57%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAM 316
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
+RG + K+V+ + ++ K + FV+W P K + PPT ++ A +
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFI 368
Query: 314 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 147
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 132 bits (318), Expect = 3e-31
Identities = 59/176 (33%), Positives = 102/176 (57%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAM 316
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
+RG + K+V+ + ++ K + FV+W P K + PPT ++ A +
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFI 368
Query: 314 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 147
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 132 bits (318), Expect = 3e-31
Identities = 59/176 (33%), Positives = 102/176 (57%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAM 316
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
+RG + K+V+ + ++ K + FV+W P K + PPT ++ A +
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFI 368
Query: 314 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 147
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 131 bits (317), Expect = 4e-31
Identities = 59/176 (33%), Positives = 102/176 (57%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAM 316
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
+RG + K+V+ + ++ K + FV+W P K + PPT ++ A +
Sbjct: 317 FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFI 368
Query: 314 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 147
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 131 bits (316), Expect = 6e-31
Identities = 60/176 (34%), Positives = 101/176 (57%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 258 LIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAI 317
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
+RG + K+V+ I I+ K + FV+W P K + PP ++ A +
Sbjct: 318 FRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPP--------KGLKMAATFV 369
Query: 314 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 147
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 370 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 425
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 130 bits (314), Expect = 1e-30
Identities = 60/176 (34%), Positives = 102/176 (57%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
L+P+PR+HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAV 316
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
+RG + K+V+ + I+ K + FV+W P K + + P G ++ A +
Sbjct: 317 FRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSV----CDIAPKG----LKMASTFI 368
Query: 314 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 147
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 130 bits (313), Expect = 1e-30
Identities = 59/176 (33%), Positives = 102/176 (57%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
L+P+PR+HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAV 316
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
+RG + K+V+ + ++ K + FV+W P K + + P G ++ A +
Sbjct: 317 FRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSV----CDIAPTG----LKMASTFI 368
Query: 314 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 147
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 129 bits (311), Expect = 2e-30
Identities = 58/176 (32%), Positives = 101/176 (57%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 495
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAM 316
Query: 494 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 315
+RG + K+V+ + ++ K + FV+W P K + + P G + A +
Sbjct: 317 FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV----CDIAPRG----LSMASTFI 368
Query: 314 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 147
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 65.7 bits (153), Expect = 3e-11
Identities = 45/185 (24%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKA-YHEQLSVAEITNACFEPANQMVKCDPRH-----GKY 513
L+P PR HF + Y P+ +A + +V ++ + N MV R+ KY
Sbjct: 260 LIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKY 319
Query: 512 MACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 333
++ + +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V ++ +
Sbjct: 320 ISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGL- 378
Query: 332 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAAL 165
ML++ T+I ++R ++D + K+AF+ Y M + EF E+R+ + +L
Sbjct: 379 ----MLASHTSIRHLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESL 434
Query: 164 EKDYE 150
+Y+
Sbjct: 435 VDEYK 439
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.9 bits (146), Expect = 2e-10
Identities = 43/185 (23%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Frame = -2
Query: 674 LVPYPRIHFPLVTYAPVISAEKA-YHEQLSVAEITNACFEPANQMVKCDPRH-----GKY 513
L+P PR HF + Y P+ +A + +V ++ + N MV R+ KY
Sbjct: 260 LIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKY 319
Query: 512 MACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 333
++ + +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V ++ +
Sbjct: 320 ISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGL- 378
Query: 332 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAAL 165
ML++ T+I +++ ++D + K+AF+ Y M + EF E+R+ + +L
Sbjct: 379 ----MLASHTSIRHLFSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESL 434
Query: 164 EKDYE 150
+Y+
Sbjct: 435 VDEYK 439
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 280 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 173
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 456 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 563
GRV I Y D + + H H L TG+ HH+ G++
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 32.7 bits (71), Expect = 0.28
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = -3
Query: 664 TPVSTS-HWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTV 488
TP+S S S +R + +PT ++ S S T S+P T +A P ++T L+ T
Sbjct: 236 TPMSRSTSLSSSRLTPTASKPTTSTARSAGSVTR-STPSTTTKSAGPSRSTTPLSRS-TA 293
Query: 487 VTSYPRM*TRPSLPSKPSVLSNSSTGVQPV-SRSVSTTSHPP 365
+S P +RP+LP ++ +S+ +P+ S S +TT+ P
Sbjct: 294 RSSTPT--SRPTLPPSKTISRSSTPTRRPIASASAATTTANP 333
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 375 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 479
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At1g62870.1 68414.m07099 expressed protein
Length = 796
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -3
Query: 688 EFQTNLCLTPVSTSHWSRTRQSSLPRR--PTMNSFPSPRSQTHASSPP 551
+ + +LC S S+ SRT L R P NS P P S S PP
Sbjct: 78 KLRCSLCDAVFSASNPSRTASEHLKRGTCPNFNSLPKPISTISPSPPP 125
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 152 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 268
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At3g11690.1 68416.m01433 expressed protein
Length = 252
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = -3
Query: 682 QTNLCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLA 503
QT TP S+ S RQ L R +++S PSPR+ S+P T A+ W
Sbjct: 15 QTKPSDTPSSSPSRSNRRQPLLQR--SLSS-PSPRASCGGSTPAEFCGGTTASCAAVWCC 71
Query: 502 VCCTVV 485
C +V
Sbjct: 72 CPCGLV 77
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -2
Query: 491 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 348
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 417 DELDSTLGFDGSDGRVHILGYDVTTVQ 497
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +2
Query: 65 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 226
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 227 TSA 235
+S+
Sbjct: 361 SSS 363
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 259 SCTPSVLSCTGTSVRVWRRESSPK 188
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,910,609
Number of Sequences: 28952
Number of extensions: 397554
Number of successful extensions: 1543
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1755792000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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