Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_M14
(799 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_07_0116 - 13022648-13022701,13022781-13022835,13023050-130231... 211 6e-55
12_02_0617 + 21256745-21256943,21257454-21257647,21257836-212580... 58 1e-08
10_08_1025 - 22391267-22391767,22392641-22392736,22392838-223931... 31 1.4
04_03_0258 - 13573730-13573816,13573881-13574666,13575043-135751... 28 7.5
04_03_0257 + 13572526-13572731,13573104-13573299 28 7.5
04_03_0103 + 11288977-11290353,11291962-11292075,11294987-112954... 28 7.5
01_07_0343 - 42866940-42867656 28 7.5
06_02_0080 + 11518393-11518398,11520318-11520401,11520846-115209... 28 9.9
05_07_0210 + 28427167-28427589 28 9.9
04_03_0235 - 13111282-13111878 28 9.9
03_05_0168 - 21466431-21466445,21467053-21467160,21467222-214673... 28 9.9
03_01_0393 - 3062859-3062972,3063027-3063311,3063472-3063759,306... 28 9.9
01_01_0816 + 6360526-6360802,6360902-6361117,6361231-6361379,636... 28 9.9
>10_07_0116 -
13022648-13022701,13022781-13022835,13023050-13023175,
13023274-13023340,13024104-13024200,13024362-13024461,
13024527-13024611,13024679-13024755,13024888-13024926,
13025001-13025038,13025118-13025208,13025536-13025628,
13025726-13025781,13025844-13025915,13026078-13026134,
13026397-13026495,13026599-13026964
Length = 523
Score = 211 bits (515), Expect = 6e-55
Identities = 99/158 (62%), Positives = 119/158 (75%)
Frame = -3
Query: 527 RLAQQTEFTPQKYFSIDKVFRNETLDATHLAEFHQVEGVVADRGLGLADLITVLDAFFKR 348
+LAQ+ F P++Y+SID+VFRNE +D THLAEFHQ+E
Sbjct: 387 KLAQEKPFAPKRYYSIDRVFRNEAVDRTHLAEFHQIE----------------------- 423
Query: 347 LGFDQLQFKPAYNPYTEPSMEIFAYHTGLAKWIEIGNSGVFRPEMLLPMGLPEDVNVIAW 168
G +L+FKPAYNPYTEPSMEIF+YH GL KW+E+GNSG+FRPEMLLPMGLPE VNVIAW
Sbjct: 424 -GMSKLRFKPAYNPYTEPSMEIFSYHEGLKKWVEVGNSGMFRPEMLLPMGLPEGVNVIAW 482
Query: 167 GLSLERPTMIKYGLNNIRDLVGPKVDLRMVYNNPICRL 54
GLSLERPTMI YG++NIRDL GPKVD ++ +NP+CRL
Sbjct: 483 GLSLERPTMILYGIDNIRDLFGPKVDFNLIKSNPLCRL 520
Score = 73.7 bits (173), Expect = 2e-13
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = -2
Query: 651 EEVHSKGGYGSQGYRYDWKIEEAQKNLLRTHTTAVSARML 532
+EVH +GGYGS+GY YDWK +EA+KNLLRTHTTAVS RML
Sbjct: 346 KEVHQRGGYGSKGYGYDWKRDEAEKNLLRTHTTAVSTRML 385
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -1
Query: 751 FQPQQXPARDXHDTFFXSSPAATTEFP 671
FQPQQ PARD HDTFF +PAAT + P
Sbjct: 312 FQPQQHPARDSHDTFFLEAPAATKQLP 338
>12_02_0617 +
21256745-21256943,21257454-21257647,21257836-21258042,
21258115-21258232,21258325-21258401,21258513-21258692,
21259312-21259356,21260309-21260413,21261115-21261261
Length = 423
Score = 57.6 bits (133), Expect = 1e-08
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 13/133 (9%)
Frame = -3
Query: 473 VFRNETLDATHLAEFHQVEGV-------VADRGL-----GLADLITVLDAFFKRL-GFDQ 333
V+R +++D+TH FHQ+EG +D G+ ADL L+ K L G +
Sbjct: 184 VYRRDSIDSTHYPCFHQMEGFRVFTPDEWSDSGMDGTAYAAADLKKTLEGLAKHLFGAVE 243
Query: 332 LQFKPAYNPYTEPSMEIFAYHTGLAKWIEIGNSGVFRPEMLLPMGLPEDVNVIAWGLSLE 153
+++ Y P+T PS E+ Y W+E+ GV E+L G ++V A+GL LE
Sbjct: 244 MRWVDTYFPFTNPSFELEIYFQD--DWLEVLGCGVTEQEILKNNGRIDNV-AWAFGLGLE 300
Query: 152 RPTMIKYGLNNIR 114
R M+ + + +IR
Sbjct: 301 RLAMVLFDIPDIR 313
>10_08_1025 -
22391267-22391767,22392641-22392736,22392838-22393106,
22393257-22393431,22393503-22393718,22393819-22393926,
22394020-22394544,22394631-22394819,22394924-22395041,
22395172-22395437,22395521-22395658
Length = 866
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +3
Query: 78 DHAQVDLGPDQVPDVVEPVLDHGGPLEGQAPRYHVHVLRQAHGQQHLRSEHP 233
DH G DQ PD +P GG + RYH H Q + L E P
Sbjct: 92 DHKPQHSGHDQPPDAAQPSGAAGG--NAKKKRYHRHTAHQIQQMEALFKECP 141
>04_03_0258 -
13573730-13573816,13573881-13574666,13575043-13575126,
13575254-13575322,13575324-13576228,13576517-13576784
Length = 732
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 133 YLIMVGRSRDRPHAITFTSSGRPMGSSISGLNTPELPISIHLARPVWYANISMLGSV*GL 312
YL+ +SR P +TFT+ + + PE I++ A+ + Y + G + L
Sbjct: 307 YLVDTNKSRKDPTRVTFTNGSLNIFLQSTQAGKPEAIIALPEAKSIQYIRLEYDGHL-RL 365
Query: 313 YAGLNCSWSKPS-LLKK 360
Y + W+ S ++KK
Sbjct: 366 YEWSDEKWTMVSDVIKK 382
>04_03_0257 + 13572526-13572731,13573104-13573299
Length = 133
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 230 PPNYQSLSIWRDRCGMRIFPCWVRCR 307
P Y SL+ W DRCG F W R
Sbjct: 3 PTPYLSLAAWLDRCGCFPFRLWASQR 28
>04_03_0103 +
11288977-11290353,11291962-11292075,11294987-11295436,
11295813-11295910,11296023-11296206,11296979-11297068,
11301608-11301727,11301812-11302054,11302715-11302988,
11303237-11303357,11303591-11303849
Length = 1109
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 165 PVPRAAHHDQVRAQQHPGPGRAQGRPAHGLQ 73
P+P AA+ D P P AQ + HG Q
Sbjct: 276 PIPAAANTDYRHGHSAPTPAEAQAQGRHGYQ 306
>01_07_0343 - 42866940-42867656
Length = 238
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 165 PVPRAAHHDQVRAQQHPGP 109
PVP A+ HDQV + HP P
Sbjct: 195 PVPHASLHDQVPSPYHPHP 213
>06_02_0080 +
11518393-11518398,11520318-11520401,11520846-11520974,
11521362-11521450,11521589-11521772,11522414-11522504,
11522816-11522970,11523190-11523282,11523473-11523565,
11523715-11523795,11523867-11524016,11524134-11524229,
11524489-11524566
Length = 442
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -3
Query: 482 IDKVFRNETLDATHLAEFHQVEG---VVADRGLGLADLITVLDAFFKRLGFD 336
ID++ E L H+ G +VADRGL + DL+ VLD F + + D
Sbjct: 131 IDEIVDAEKAAEIELKRRHKALGLLRIVADRGLQVGDLV-VLDIFAESITSD 181
>05_07_0210 + 28427167-28427589
Length = 140
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +2
Query: 53 RACI*GCCRPCAGRPWAR-PGPGCC*ART*SWWAARGTGPTLSRSRPQAGPWAAAS 217
RAC+ CA A PG G AR AA GP R Q PW A S
Sbjct: 30 RACV-AAAAACAVLGTAGGPGEGAVMARAPEATAAAAAGPARWSDRRQCPPWRANS 84
>04_03_0235 - 13111282-13111878
Length = 198
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = +2
Query: 68 GCCRPCAGRPWARPGPG-CC 124
GCC P +GRP R G CC
Sbjct: 134 GCCSPISGRPRRRSGHSRCC 153
>03_05_0168 -
21466431-21466445,21467053-21467160,21467222-21467365,
21467778-21467846,21467928-21468071,21468409-21468565,
21468671-21468767,21469015-21469297,21469382-21469507,
21470098-21470178,21471990-21472072,21472393-21472478,
21473329-21473422,21473516-21473681,21473777-21473851,
21474082-21474157,21474259-21474347
Length = 630
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 494 KYFSIDKVFRNETLDATHLAEFHQVEGVVA 405
+ + I K FRNE +D TH EF E +A
Sbjct: 341 RVYEIGKQFRNEGIDLTHNPEFTTCEFYMA 370
>03_01_0393 -
3062859-3062972,3063027-3063311,3063472-3063759,
3063844-3064161,3064232-3064415,3064504-3064659,
3066394-3066620,3066734-3066804,3067090-3067534
Length = 695
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 652 TLSRYXWGTPWWQQ 693
T S+ WGT WWQQ
Sbjct: 500 TSSKREWGTSWWQQ 513
>01_01_0816 +
6360526-6360802,6360902-6361117,6361231-6361379,
6361474-6361750,6362228-6362457
Length = 382
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 201 HGQQHLRSEHPRITNLYPFGET 266
HGQ ++ S HP+I +++ FG +
Sbjct: 24 HGQANMYSGHPKIDSIFSFGNS 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,496,936
Number of Sequences: 37544
Number of extensions: 415752
Number of successful extensions: 1405
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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