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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_M14
         (799 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000263-6|AAO21394.1|  496|Caenorhabditis elegans Phenylalanyl ...   264   4e-71
AF000263-5|AAG00015.1|  552|Caenorhabditis elegans Phenylalanyl ...   264   4e-71
AL132943-13|CAC14396.3|  458|Caenorhabditis elegans Hypothetical...    49   4e-06
AL117207-24|CAB60398.3|  458|Caenorhabditis elegans Hypothetical...    49   4e-06
AB096637-1|BAC76737.1|  458|Caenorhabditis elegans mitochondrial...    49   4e-06
Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical pr...    32   0.41 
AL132948-8|CAC51068.1|  230|Caenorhabditis elegans Hypothetical ...    28   6.7  
U41746-9|AAA83334.3|  559|Caenorhabditis elegans Groundhog (hedg...    28   8.9  
U41105-3|AAX88810.1|  514|Caenorhabditis elegans Lysyl (k) trna ...    28   8.9  
U41105-2|AAK68395.1|  596|Caenorhabditis elegans Lysyl (k) trna ...    28   8.9  
U41105-1|AAA82396.1|  572|Caenorhabditis elegans Lysyl (k) trna ...    28   8.9  

>AF000263-6|AAO21394.1|  496|Caenorhabditis elegans Phenylalanyl (f)
           trna synthetaseprotein 1, isoform b protein.
          Length = 496

 Score =  264 bits (648), Expect = 4e-71
 Identities = 121/160 (75%), Positives = 136/160 (85%)
 Frame = -3

Query: 527 RLAQQTEFTPQKYFSIDKVFRNETLDATHLAEFHQVEGVVADRGLGLADLITVLDAFFKR 348
           +LAQ+  F P K FSID+VFRNETLDATHLAEFHQVEGV+A++ L LA LI +   FFK+
Sbjct: 338 QLAQEG-FRPSKLFSIDRVFRNETLDATHLAEFHQVEGVIAEKNLSLAHLIGIFTEFFKK 396

Query: 347 LGFDQLQFKPAYNPYTEPSMEIFAYHTGLAKWIEIGNSGVFRPEMLLPMGLPEDVNVIAW 168
           LG   L+FKP YNPYTEPSMEIFAYH GL KW+EIGNSG+FRPEMLLPMGLP DVNV  +
Sbjct: 397 LGITNLRFKPTYNPYTEPSMEIFAYHQGLTKWVEIGNSGMFRPEMLLPMGLPADVNVAGY 456

Query: 167 GLSLERPTMIKYGLNNIRDLVGPKVDLRMVYNNPICRLDK 48
           GLSLERPTMIKYG+NNIRDL G K+DL +VYNNPICRLDK
Sbjct: 457 GLSLERPTMIKYGINNIRDLFGSKIDLNVVYNNPICRLDK 496



 Score = 77.8 bits (183), Expect = 8e-15
 Identities = 34/38 (89%), Positives = 35/38 (92%)
 Frame = -2

Query: 645 VHSKGGYGSQGYRYDWKIEEAQKNLLRTHTTAVSARML 532
           VHSKGGYGS GY YDWKIEEAQKN+LRTHTTAVSAR L
Sbjct: 299 VHSKGGYGSAGYNYDWKIEEAQKNVLRTHTTAVSARQL 336



 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = -1

Query: 751 FQPQQXPARDXHDTFFXSSPAATTEFP 671
           FQPQQ PARD HDTFF S PA +T+FP
Sbjct: 263 FQPQQHPARDAHDTFFVSDPAISTKFP 289


>AF000263-5|AAG00015.1|  552|Caenorhabditis elegans Phenylalanyl (f)
           trna synthetaseprotein 1, isoform a protein.
          Length = 552

 Score =  264 bits (648), Expect = 4e-71
 Identities = 121/160 (75%), Positives = 136/160 (85%)
 Frame = -3

Query: 527 RLAQQTEFTPQKYFSIDKVFRNETLDATHLAEFHQVEGVVADRGLGLADLITVLDAFFKR 348
           +LAQ+  F P K FSID+VFRNETLDATHLAEFHQVEGV+A++ L LA LI +   FFK+
Sbjct: 394 QLAQEG-FRPSKLFSIDRVFRNETLDATHLAEFHQVEGVIAEKNLSLAHLIGIFTEFFKK 452

Query: 347 LGFDQLQFKPAYNPYTEPSMEIFAYHTGLAKWIEIGNSGVFRPEMLLPMGLPEDVNVIAW 168
           LG   L+FKP YNPYTEPSMEIFAYH GL KW+EIGNSG+FRPEMLLPMGLP DVNV  +
Sbjct: 453 LGITNLRFKPTYNPYTEPSMEIFAYHQGLTKWVEIGNSGMFRPEMLLPMGLPADVNVAGY 512

Query: 167 GLSLERPTMIKYGLNNIRDLVGPKVDLRMVYNNPICRLDK 48
           GLSLERPTMIKYG+NNIRDL G K+DL +VYNNPICRLDK
Sbjct: 513 GLSLERPTMIKYGINNIRDLFGSKIDLNVVYNNPICRLDK 552



 Score = 77.8 bits (183), Expect = 8e-15
 Identities = 34/38 (89%), Positives = 35/38 (92%)
 Frame = -2

Query: 645 VHSKGGYGSQGYRYDWKIEEAQKNLLRTHTTAVSARML 532
           VHSKGGYGS GY YDWKIEEAQKN+LRTHTTAVSAR L
Sbjct: 355 VHSKGGYGSAGYNYDWKIEEAQKNVLRTHTTAVSARQL 392



 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = -1

Query: 751 FQPQQXPARDXHDTFFXSSPAATTEFP 671
           FQPQQ PARD HDTFF S PA +T+FP
Sbjct: 319 FQPQQHPARDAHDTFFVSDPAISTKFP 345


>AL132943-13|CAC14396.3|  458|Caenorhabditis elegans Hypothetical
           protein Y60A3A.13 protein.
          Length = 458

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 23/68 (33%), Positives = 41/68 (60%)
 Frame = -3

Query: 317 AYNPYTEPSMEIFAYHTGLAKWIEIGNSGVFRPEMLLPMGLPEDVNVIAWGLSLERPTMI 138
           AY P+T PS E+  ++ G  +W+E+   G+   ++L   G+ + +   A+G+ LER  M+
Sbjct: 271 AYFPFTHPSWELEVFYNG--QWLEVLGCGIMEQKLLESAGVTDKIGW-AFGIGLERIAMV 327

Query: 137 KYGLNNIR 114
            YG+ +IR
Sbjct: 328 LYGIPDIR 335



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 491 YFSIDKVFRNETLDATHLAEFHQVEGV 411
           +  I  V+R + +D TH   FHQ+EGV
Sbjct: 170 FLVIGDVYRRDEVDRTHYPCFHQIEGV 196


>AL117207-24|CAB60398.3|  458|Caenorhabditis elegans Hypothetical
           protein Y60A3A.13 protein.
          Length = 458

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 23/68 (33%), Positives = 41/68 (60%)
 Frame = -3

Query: 317 AYNPYTEPSMEIFAYHTGLAKWIEIGNSGVFRPEMLLPMGLPEDVNVIAWGLSLERPTMI 138
           AY P+T PS E+  ++ G  +W+E+   G+   ++L   G+ + +   A+G+ LER  M+
Sbjct: 271 AYFPFTHPSWELEVFYNG--QWLEVLGCGIMEQKLLESAGVTDKIGW-AFGIGLERIAMV 327

Query: 137 KYGLNNIR 114
            YG+ +IR
Sbjct: 328 LYGIPDIR 335



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 491 YFSIDKVFRNETLDATHLAEFHQVEGV 411
           +  I  V+R + +D TH   FHQ+EGV
Sbjct: 170 FLVIGDVYRRDEVDRTHYPCFHQIEGV 196


>AB096637-1|BAC76737.1|  458|Caenorhabditis elegans mitochondrial
           phenylalanyl-tRNAsynthetase protein.
          Length = 458

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 23/68 (33%), Positives = 41/68 (60%)
 Frame = -3

Query: 317 AYNPYTEPSMEIFAYHTGLAKWIEIGNSGVFRPEMLLPMGLPEDVNVIAWGLSLERPTMI 138
           AY P+T PS E+  ++ G  +W+E+   G+   ++L   G+ + +   A+G+ LER  M+
Sbjct: 271 AYFPFTHPSWELEVFYNG--QWLEVLGCGIMEQKLLESAGVTDKIGW-AFGIGLERIAMV 327

Query: 137 KYGLNNIR 114
            YG+ +IR
Sbjct: 328 LYGIPDIR 335



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 491 YFSIDKVFRNETLDATHLAEFHQVEGV 411
           +  I  V+R + +D TH   FHQ+EGV
Sbjct: 170 FLVIGDVYRRDEVDRTHYPCFHQIEGV 196


>Z30423-1|CAA83003.1| 1681|Caenorhabditis elegans Hypothetical
           protein T20G5.1 protein.
          Length = 1681

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = -3

Query: 521 AQQTEFTPQKYFSIDKVFRNETLDATHLAEFHQVEGVVADRGLGLADLITVLDAFFK 351
           A++  F P   F + ++ RN   D  H A+F Q+    ++ G  LADL  ++D F +
Sbjct: 503 AKRVGFQPDYLFQLRQILRNSNPD--HGAKFAQLLVSESENGEPLADLSQIIDCFME 557


>AL132948-8|CAC51068.1|  230|Caenorhabditis elegans Hypothetical
           protein Y39B6A.9 protein.
          Length = 230

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 636 KGGYGSQGYRYDWKIEEAQKN 574
           +GGY  QG+   WK  EAQKN
Sbjct: 195 QGGYAKQGHEEGWK-NEAQKN 214


>U41746-9|AAA83334.3|  559|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 6 protein.
          Length = 559

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 162 QAPRYHVHVLRQAHGQQHLRSEHPRITNLYPFGETGVVCEY 284
           Q P+  V   R A G  ++   +PR+ + YPF    VV  Y
Sbjct: 31  QVPQQQVQQFRPA-GNVYIAQPNPRVVSQYPFRSAPVVRPY 70


>U41105-3|AAX88810.1|  514|Caenorhabditis elegans Lysyl (k) trna
           synthetase protein1, isoform c protein.
          Length = 514

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
 Frame = -3

Query: 494 KYFSIDKVFRNETLDATHLAEFHQVEGVVA----DRGLGLA-DLITVLDAFFKRLGFDQL 330
           + + + ++FRNE +D TH  EF   E  +A    +  + L  DL++ +    K  G  ++
Sbjct: 235 RVYEVGRLFRNEGIDLTHNPEFTTCEFYMAYADYEDVIQLTEDLLSSMVMSIK--GTYKI 292

Query: 329 QFKPAYNPYTEPSMEI 282
           ++ P   P TEP  E+
Sbjct: 293 EYHP-NGPNTEPVYEV 307


>U41105-2|AAK68395.1|  596|Caenorhabditis elegans Lysyl (k) trna
           synthetase protein1, isoform b protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
 Frame = -3

Query: 494 KYFSIDKVFRNETLDATHLAEFHQVEGVVA----DRGLGLA-DLITVLDAFFKRLGFDQL 330
           + + + ++FRNE +D TH  EF   E  +A    +  + L  DL++ +    K  G  ++
Sbjct: 317 RVYEVGRLFRNEGIDLTHNPEFTTCEFYMAYADYEDVIQLTEDLLSSMVMSIK--GTYKI 374

Query: 329 QFKPAYNPYTEPSMEI 282
           ++ P   P TEP  E+
Sbjct: 375 EYHP-NGPNTEPVYEV 389


>U41105-1|AAA82396.1|  572|Caenorhabditis elegans Lysyl (k) trna
           synthetase protein1, isoform a protein.
          Length = 572

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
 Frame = -3

Query: 494 KYFSIDKVFRNETLDATHLAEFHQVEGVVA----DRGLGLA-DLITVLDAFFKRLGFDQL 330
           + + + ++FRNE +D TH  EF   E  +A    +  + L  DL++ +    K  G  ++
Sbjct: 293 RVYEVGRLFRNEGIDLTHNPEFTTCEFYMAYADYEDVIQLTEDLLSSMVMSIK--GTYKI 350

Query: 329 QFKPAYNPYTEPSMEI 282
           ++ P   P TEP  E+
Sbjct: 351 EYHP-NGPNTEPVYEV 365


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,356,892
Number of Sequences: 27780
Number of extensions: 308124
Number of successful extensions: 980
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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