Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_M13
(773 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040653-3|ABS83855.1| 390|Caenorhabditis elegans Hypothetical ... 29 4.9
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 28 6.4
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 28 6.4
>AF040653-3|ABS83855.1| 390|Caenorhabditis elegans Hypothetical
protein K05F6.4 protein.
Length = 390
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -1
Query: 563 LFRTLKMN*SDLLFIEIKNKRYKPFNVRRFLLSKDFFCNI 444
+FR +K+ ++L + +KR K F +R+F + KD CNI
Sbjct: 84 IFRNMKI--TELTCCSLISKRTKHF-IRQFCIFKDLLCNI 120
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -3
Query: 384 EASRKKSVNFQIEPMLLVQVCQILMIQTPNVYNL*VHVRD--KCVNTMLCDATQSRLYFV 211
E K S + +L Q+ Q+L + P + +R+ +C N L T+ + FV
Sbjct: 1164 EQLNKTSQRDRFPQEILEQMGQVLEVGVPQIVLKHKEMREESRCANLALAYFTRFAMSFV 1223
Query: 210 DRDTFTKW 187
DR +W
Sbjct: 1224 DRGVVFRW 1231
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -3
Query: 384 EASRKKSVNFQIEPMLLVQVCQILMIQTPNVYNL*VHVRD--KCVNTMLCDATQSRLYFV 211
E K S + +L Q+ Q+L + P + +R+ +C N L T+ + FV
Sbjct: 1164 EQLNKTSQRDRFPQEILEQMGQVLEVGVPQIVLKHKEMREESRCANLALAYFTRFAMSFV 1223
Query: 210 DRDTFTKW 187
DR +W
Sbjct: 1224 DRGVVFRW 1231
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 379 GFSAVTIKDDRNRDKRILVLQSIL 450
GFS V KD +RD+ ++V+QS++
Sbjct: 805 GFSIVDYKDPTHRDESVIVVQSLV 828
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 379 GFSAVTIKDDRNRDKRILVLQSIL 450
GFS V KD +RD+ ++V+QS++
Sbjct: 827 GFSIVDYKDPTHRDESVIVVQSLV 850
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical
protein C52A11.4e protein.
Length = 2184
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 379 GFSAVTIKDDRNRDKRILVLQSIL 450
GFS V KD +RD+ ++V+QS++
Sbjct: 618 GFSIVDYKDPTHRDESVIVVQSLV 641
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 379 GFSAVTIKDDRNRDKRILVLQSIL 450
GFS V KD +RD+ ++V+QS++
Sbjct: 925 GFSIVDYKDPTHRDESVIVVQSLV 948
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 379 GFSAVTIKDDRNRDKRILVLQSIL 450
GFS V KD +RD+ ++V+QS++
Sbjct: 805 GFSIVDYKDPTHRDESVIVVQSLV 828
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 379 GFSAVTIKDDRNRDKRILVLQSIL 450
GFS V KD +RD+ ++V+QS++
Sbjct: 827 GFSIVDYKDPTHRDESVIVVQSLV 850
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical
protein C52A11.4e protein.
Length = 2184
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 379 GFSAVTIKDDRNRDKRILVLQSIL 450
GFS V KD +RD+ ++V+QS++
Sbjct: 618 GFSIVDYKDPTHRDESVIVVQSLV 641
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 379 GFSAVTIKDDRNRDKRILVLQSIL 450
GFS V KD +RD+ ++V+QS++
Sbjct: 925 GFSIVDYKDPTHRDESVIVVQSLV 948
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical
protein C52A11.4c protein.
Length = 2202
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 379 GFSAVTIKDDRNRDKRILVLQSIL 450
GFS V KD +RD+ ++V+QS++
Sbjct: 636 GFSIVDYKDPTHRDESVIVVQSLV 659
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 379 GFSAVTIKDDRNRDKRILVLQSIL 450
GFS V KD +RD+ ++V+QS++
Sbjct: 596 GFSIVDYKDPTHRDESVIVVQSLV 619
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,574,148
Number of Sequences: 27780
Number of extensions: 270578
Number of successful extensions: 556
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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