BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_M12 (841 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U52002-8|AAU05577.1| 842|Caenorhabditis elegans Human dice1 (de... 29 5.4 U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 28 9.5 U52002-9|AAB37727.2| 839|Caenorhabditis elegans Human dice1 (de... 28 9.5 >U52002-8|AAU05577.1| 842|Caenorhabditis elegans Human dice1 (deleted in cancer)homolog protein 1, isoform b protein. Length = 842 Score = 28.7 bits (61), Expect = 5.4 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = -3 Query: 335 LTKIPITATFPVRSISVNLVKKKFQLIADFRP 240 L I TA P+ S VNLVK KF+ + D RP Sbjct: 244 LPAIHFTAA-PITSDEVNLVKMKFKKVIDKRP 274 >U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical protein C32E12.4 protein. Length = 1553 Score = 27.9 bits (59), Expect = 9.5 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -1 Query: 403 QFDNYRKQMDNGNNQLTSGI 344 Q D RKQM +G+NQL S I Sbjct: 1146 QMDEIRKQMKSGSNQLQSAI 1165 >U52002-9|AAB37727.2| 839|Caenorhabditis elegans Human dice1 (deleted in cancer)homolog protein 1, isoform a protein. Length = 839 Score = 27.9 bits (59), Expect = 9.5 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3 Query: 305 PVRSISVNLVKKKFQLIADFRP 240 P+ S VNLVK KF+ + D RP Sbjct: 250 PITSDEVNLVKMKFKKVIDKRP 271 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,114,816 Number of Sequences: 27780 Number of extensions: 335505 Number of successful extensions: 653 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 638 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 653 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2077023564 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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