Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_M11
         (825 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical pr...    31   1.3  
AF003141-13|AAK21490.1|  549|Caenorhabditis elegans Hypothetical...    28   9.3  

>Z93387-2|CAB07650.1|  763|Caenorhabditis elegans Hypothetical
           protein T02E9.3 protein.
          Length = 763

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
 Frame = -1

Query: 504 WLVVAIVILLSNERNRSFGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTV 325
           +L + I   L N +   FG L H  G       LP   +    S+  + ++++G    + 
Sbjct: 195 YLYMKIFKKLRNHQLYMFGQLTHRGGERERRHSLPRVIIEEVRSRRGSRMSQTGSQSGSP 254

Query: 324 EPRESGGSKQCDFTSRVSH--SKRETRRRSP 238
             R+SGGSK+   +    H  +K + R RSP
Sbjct: 255 TRRQSGGSKERSPSQPDIHIVAKPQQRWRSP 285


>AF003141-13|AAK21490.1|  549|Caenorhabditis elegans Hypothetical
           protein W02D3.11a protein.
          Length = 549

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 11/95 (11%)
 Frame = +2

Query: 29  ASSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSE--PRHRTELY-----PDLRS- 184
           A S +  G   S +     AA  S+ P Q++ S+  Y    P+   E Y     PD R  
Sbjct: 265 APSVQDYGVRASYDPYTQPAAPVSSYPSQQQPSAGYYDNYAPKTAYESYGRERGPDPRDV 324

Query: 185 ---RDARVKKKTDSIDLRDPNGLRRRVSRFECETR 280
              RD+R+    DS  L DP     R S +  E+R
Sbjct: 325 RDPRDSRMPDPRDSRALSDPYAAESRYSEYGYESR 359


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,057,960
Number of Sequences: 27780
Number of extensions: 378089
Number of successful extensions: 1065
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)