BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_M11 (825 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical pr... 31 1.3 AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 28 9.3 >Z93387-2|CAB07650.1| 763|Caenorhabditis elegans Hypothetical protein T02E9.3 protein. Length = 763 Score = 30.7 bits (66), Expect = 1.3 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 2/91 (2%) Frame = -1 Query: 504 WLVVAIVILLSNERNRSFGHLVHALGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTV 325 +L + I L N + FG L H G LP + S+ + ++++G + Sbjct: 195 YLYMKIFKKLRNHQLYMFGQLTHRGGERERRHSLPRVIIEEVRSRRGSRMSQTGSQSGSP 254 Query: 324 EPRESGGSKQCDFTSRVSH--SKRETRRRSP 238 R+SGGSK+ + H +K + R RSP Sbjct: 255 TRRQSGGSKERSPSQPDIHIVAKPQQRWRSP 285 >AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical protein W02D3.11a protein. Length = 549 Score = 27.9 bits (59), Expect = 9.3 Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 11/95 (11%) Frame = +2 Query: 29 ASSDESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSE--PRHRTELY-----PDLRS- 184 A S + G S + AA S+ P Q++ S+ Y P+ E Y PD R Sbjct: 265 APSVQDYGVRASYDPYTQPAAPVSSYPSQQQPSAGYYDNYAPKTAYESYGRERGPDPRDV 324 Query: 185 ---RDARVKKKTDSIDLRDPNGLRRRVSRFECETR 280 RD+R+ DS L DP R S + E+R Sbjct: 325 RDPRDSRMPDPRDSRALSDPYAAESRYSEYGYESR 359 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,057,960 Number of Sequences: 27780 Number of extensions: 378089 Number of successful extensions: 1065 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1021 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1065 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 2040452812 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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