Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_M09
         (794 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0521 + 4500268-4500283,4500364-4500680,4500999-4501094,450...    35   0.065
04_03_0618 - 18071612-18072795,18073007-18073072,18074101-180741...    33   0.35 
03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960...    31   1.1  
04_04_0161 + 23203786-23203848,23204141-23204180,23204865-232050...    28   7.4  
07_01_0512 - 3818743-3819087                                           28   9.8  
03_06_0689 + 35564143-35564643,35565994-35566452,35566553-35567176     28   9.8  
01_06_1100 + 34530132-34530485,34530544-34530705                       28   9.8  
01_06_0634 + 30746767-30747012,30747083-30747118,30747554-307478...    28   9.8  

>05_01_0521 +
           4500268-4500283,4500364-4500680,4500999-4501094,
           4501219-4501296,4501333-4501557,4502842-4502910,
           4502946-4503200
          Length = 351

 Score = 35.1 bits (77), Expect = 0.065
 Identities = 25/96 (26%), Positives = 43/96 (44%)
 Frame = -2

Query: 769 AKXDPFVMAPQFQGVSLQASGSIGILGVDISSDVQFRSHLEGKAKLASKMLGVLNRAKRY 590
           AK D         G S+     I +   D  + V++R     ++KLA+ +LG ++    +
Sbjct: 86  AKEDALCTKNMVPGESVYGEKRISVQNED-GTKVEYRVWNPFRSKLAAAVLGGVDNI--W 142

Query: 589 FTPGQRLLLYKAQVRPRVEYCSHLWAGAPKYQLLPF 482
             PG R+L         V + S +   +P+Y +LPF
Sbjct: 143 IAPGTRVLYLGGASGTTVSHVSDIVGPSPRYAILPF 178


>04_03_0618 -
           18071612-18072795,18073007-18073072,18074101-18074175,
           18074234-18074963
          Length = 684

 Score = 32.7 bits (71), Expect = 0.35
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -3

Query: 441 PFSRIAWSLWVCGGTSGPSVFCTACSMGSALRNC 340
           PF  +A  LW+CGG    + +C+A S  + +R+C
Sbjct: 2   PFHMLASLLWLCGGI---AAYCSAASAATCVRSC 32


>03_05_0951 +
           29093962-29094373,29095291-29095388,29095689-29096087,
           29096999-29097724,29097802-29097968,29098046-29098311,
           29098396-29098581,29099072-29099346,29099435-29099683
          Length = 925

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -1

Query: 116 RLGSAPGIX*SPWATGNHLPS--GGPYARLPTKAIKK 12
           R+GS P     P A GN LP+  GGP  R P  A+ +
Sbjct: 886 RMGSLPSRPNQPGAAGNRLPAGYGGPIVRPPPNAMPR 922


>04_04_0161 +
           23203786-23203848,23204141-23204180,23204865-23205016,
           23205270-23205406,23206356-23206396,23206500-23207098,
           23207599-23207679,23208146-23208208,23209141-23209197
          Length = 410

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +3

Query: 327 GIISNNSSEHSPWNMRYKIQRDPKSLRR 410
           G+ SN  +E +  ++R K+ R PK++RR
Sbjct: 161 GLSSNGGAEQNGVDLREKLSRKPKNIRR 188


>07_01_0512 - 3818743-3819087
          Length = 114

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 73  VAHGLQXMPGAEPSRCLLLNTLHKPRFEEGHSVRETP 183
           +A G     GAE  RCL+ + L +P  E GH     P
Sbjct: 54  LAAGRPPSSGAEGVRCLVPSPLDRPDLEAGHPPPREP 90


>03_06_0689 + 35564143-35564643,35565994-35566452,35566553-35567176
          Length = 527

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +3

Query: 393 PKSLRRPRGSKRSVRMGLSTIRTALFCMESNGRSWYLGAPAQRWEQ 530
           P +L  PR + R VR+G   +      M +   +W +G  A RWE+
Sbjct: 392 PATLLMPRETMRDVRIGGYEVAARTRVMVN---AWAIGRDAARWEE 434


>01_06_1100 + 34530132-34530485,34530544-34530705
          Length = 171

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -2

Query: 304 TARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVF 176
           +A+H    H   L+ L+  T + +   +   + L+NEL ST+F
Sbjct: 105 SAKHLDTAHSVVLKELKKPTGQQEARDVTNQLELFNELKSTLF 147


>01_06_0634 +
           30746767-30747012,30747083-30747118,30747554-30747850,
           30748482-30748544,30748643-30748696,30748837-30748854,
           30749554-30749625,30749731-30749787,30750160-30750236,
           30751013-30751094,30751585-30751701,30752083-30752210,
           30753074-30753143,30753725-30753765,30753963-30753990,
           30754151-30754210
          Length = 481

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 291 GVEFIHT-TWSHCGHPQCVSRGLFCHVPSGY 202
           G+ ++ T +W HCG+    + GL  HVP  Y
Sbjct: 444 GLAYLRTESWVHCGNGMKQAIGLKFHVPEEY 474


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,058,282
Number of Sequences: 37544
Number of extensions: 642291
Number of successful extensions: 2038
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2037
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)