Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_M09
(794 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 38 5e-04
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 37 6e-04
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 36 0.001
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 32 0.023
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 29 0.13
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 29 0.17
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 27 0.51
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 27 0.67
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 25 2.7
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 25 3.6
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 6.2
AJ618923-1|CAF02002.1| 155|Anopheles gambiae odorant-binding pr... 24 6.2
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 23 8.2
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 23 8.2
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 37.5 bits (83), Expect = 5e-04
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -2
Query: 694 LGVDISSDVQFRSHLEGKAKLASKMLGVLNRAKRYF-TPGQRLLLYKAQVRPRVEYCSHL 518
LGV + S + F+ H++ +++LGV+ R F P +Y VR +EY +
Sbjct: 847 LGVLLDSSLNFKQHIDDVVARGNQLLGVVIRTTNEFRNPMCIKAVYNCIVRSVLEYSCVV 906
Query: 517 WAGAPKYQLLPFDSIQKRAVR 455
W+ + ++IQ++ R
Sbjct: 907 WSPTTASSIARIEAIQRKLTR 927
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 37.1 bits (82), Expect = 6e-04
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Frame = -2
Query: 778 AFTAKXDPFVMAPQFQGVSLQASGSIGILGVDISSDVQFRSHLEGKAKLASKMLGVLNRA 599
+F+ P SL SI LG+ + S + F+ L+ A++ LG + R
Sbjct: 748 SFSHSLSPISFNYTLSNSSLSRVLSIRDLGIILDSRLNFKLQLDEVLLKANRTLGFILRF 807
Query: 598 KRYFTPGQRLL-LYKAQVRPRVEYCSHLWAGAPKYQLLPFDSIQKRAVRI 452
F L LY A VRP +EY S +W +SIQ+ R+
Sbjct: 808 TSIFRDQSFLRNLYYALVRPLLEYASIIWNPPTIDGCSRIESIQRLFTRV 857
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 35.9 bits (79), Expect = 0.001
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Frame = -2
Query: 727 VSLQASGSIGILGVDISSDVQFRSHLEGKAKLASKMLGVLNRAKRYF----TPGQRLLLY 560
V +Q+S SI LGV + +++R H+ ++ AS+++ + R + T RLL Y
Sbjct: 782 VEVQSSRSIRYLGVQLQDHLKWRDHVTKVSEKASRVVAAVTRLMQNHSGPRTAKSRLLAY 841
Query: 559 KAQVRPRVEYCSHLWAGAPKYQ--LLPFDSIQKRAVRIVDNPILTDRLEPLGLRRDFGSL 386
A+ + Y + +WA A + + +Q++A V T R E L +
Sbjct: 842 VAE--SVLRYAAPVWAEATQVRECRRMLQRVQRKAAIRVARAFRTVRYETATLLAGLVPI 899
Query: 385 CIL 377
C L
Sbjct: 900 CHL 902
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 31.9 bits (69), Expect = 0.023
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Frame = -2
Query: 730 GVSLQASGSIGILGVDISSDVQFRSHLE---GKAKLASKMLGVLNRAKRYFTPGQRLLLY 560
GV + + SI LGV I + + ++SH+E KA +K LG L R +R LL
Sbjct: 742 GVERRTTRSIRYLGVVIDNQLSWKSHVEYCTTKALRTAKALGCLMRNHSGPKCAKRRLL- 800
Query: 559 KAQVRPRVEYCSHLWAGAPKYQ--LLPFDSIQKRAVRIVDNPILTDRLEPLGLRRDFGSL 386
+ V + Y + +W A K Q +QK V + T R + + +
Sbjct: 801 ASVVDSILRYAAPVWHEATKNQECRRMLQRVQKHCAIKVSSAFPTVRYQTAVVLASMIPI 860
Query: 385 CIL 377
C+L
Sbjct: 861 CLL 863
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 29.5 bits (63), Expect = 0.13
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -2
Query: 727 VSLQASGSIGILGVDISSDVQFRSHLEGKAKLASKMLGVL 608
V ++++ S+ LGV I ++F+SHLE K K + L
Sbjct: 758 VQVESTRSLKYLGVVIDDRLKFKSHLEEACKKVMKAINAL 797
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 29.1 bits (62), Expect = 0.17
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -2
Query: 721 LQASGSIGILGVDISSDVQFRSHLEGKAKLASKMLGVLNRAKRYFTPGQ--RLLLYKAQV 548
+ + SI LGV I + ++ H+E A +++GV+ R + Q + L A
Sbjct: 731 IHSKQSIRYLGVQIHDHLSWKPHVELSTAKALRVVGVVTAVMRNHSGPQVAKRRLLAAVA 790
Query: 547 RPRVEYCSHLWAGAPKYQ 494
+ Y + +W+ A Q
Sbjct: 791 ESIIRYAAPVWSEATDLQ 808
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 27.5 bits (58), Expect = 0.51
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 739 QFQGVSLQASGSIGILGVDISSDVQFRSHLEGKAKLASKMLGVL 608
Q G S+Q++ ++ LGVD+ HLE A AS++ L
Sbjct: 714 QAGGHSIQSTETLKYLGVDLCRKQHHSRHLERVANKASRITNAL 757
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 27.1 bits (57), Expect = 0.67
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = -2
Query: 730 GVSLQASGSIGILGVDISSDVQFRSHLEGKAKLASKMLGVLNRAKRYFTPGQ--RLLLYK 557
GV +++ SI LGV + + +R H+E A A +++ L R + Q + L
Sbjct: 731 GVEVRSKRSIRYLGVMLHDHLSWRPHVEMVADKALRVVRALRGIMRNHSGPQVSKRKLLA 790
Query: 556 AQVRPRVEYCSHLWAGAPKYQ 494
A + Y + +W A Q
Sbjct: 791 AVAASIIRYGAPVWTEATDLQ 811
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 25.0 bits (52), Expect = 2.7
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -2
Query: 736 FQGVSLQASGSIGILGVDISSDVQFRSHLEGKAKLASKMLGVLNR 602
F GV++ S SI LGV + + + + H++ A++++ +NR
Sbjct: 795 FGGVNVPFSRSIKYLGVRVHAHLSWVPHVKEITLKATRIVHAVNR 839
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 24.6 bits (51), Expect = 3.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 511 GAPKYQLLPFDSIQKRAVRIVDNPILTDRL 422
G P+ L+ FD + A +++D I+TD L
Sbjct: 2944 GRPESTLI-FDKLPSAASKVIDEIIITDNL 2972
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.8 bits (49), Expect = 6.2
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2
Query: 703 IGILGVDISSDVQFRSHLEGKAKLASKML 617
IGI+ ++SDVQFRS KAK ++L
Sbjct: 133 IGIIS-RLNSDVQFRSLDLSKAKTTVRLL 160
>AJ618923-1|CAF02002.1| 155|Anopheles gambiae odorant-binding
protein OBPjj5c protein.
Length = 155
Score = 23.8 bits (49), Expect = 6.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 734 PRSIPASFREYRDTWSRHFERCP 666
P+ IP+SFR + T+S + CP
Sbjct: 102 PQCIPSSFRFLQCTFSIVYRDCP 124
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 23.4 bits (48), Expect = 8.2
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 326 WYH-LEQFLRALPMEHAVQNTEGPEVPPQTQR 418
W+H LR P EH V TE P + P++ R
Sbjct: 87 WHHTFYNELRVAPEEHPVLLTEAP-LNPKSNR 117
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 23.4 bits (48), Expect = 8.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 354 HSPWNMRYKIQRDPKSLRRPRGSKRSVRMG 443
H P +R + + ++ PRGS R R G
Sbjct: 817 HDPQKLRIVVSKSANAMHPPRGS-RHTRQG 845
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 941,813
Number of Sequences: 2352
Number of extensions: 21702
Number of successful extensions: 53
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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