Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_M09
         (794 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           24   1.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.5  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   7.5  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   7.5  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   10.0 
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   10.0 
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   10.0 
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   10.0 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   10.0 

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 484 FDSIQKRAVRIVDNPILTDRLEPLGL 407
           +DSI+ R   I D   +T+   PLGL
Sbjct: 167 YDSIEARDSAIFDGDFITENNLPLGL 192


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +3

Query: 132 YSPQASX*RRS*RSGNTVEGSSFHSRMVRGKKDLWKRTVD 251
           Y P A   R   RS + + G+  H   V+G    W R ++
Sbjct: 517 YEPSACRPRHEIRSTDVIPGTQEHVCGVKGIPCSWGRAIN 556


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 502 WEPRPRDGSSTPREAGLVLYRAKVFV 579
           W  RPR+ + T  +AG  ++R KV +
Sbjct: 45  WWSRPREPAQTTSKAG--IHRKKVLL 68


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 354 HSPWNMRYKIQRDPKSL 404
           H PWN    +QR  K +
Sbjct: 462 HEPWNAPLNVQRAAKCI 478


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -1

Query: 716 SFREYRDTW 690
           S+R+YR+TW
Sbjct: 55  SYRKYRETW 63


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -1

Query: 716 SFREYRDTW 690
           S+R+YR+TW
Sbjct: 55  SYRKYRETW 63


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -1

Query: 716 SFREYRDTW 690
           S+R+YR+TW
Sbjct: 55  SYRKYRETW 63


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -1

Query: 716 SFREYRDTW 690
           S+R+YR+TW
Sbjct: 55  SYRKYRETW 63


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +2

Query: 389 GPEVPPQTQRLQAIRENGVIDNPNGSLLYGVKWKK 493
           G E+ P TQ +   R      N  G+ +  V W K
Sbjct: 309 GAEIEPSTQTIDFGRPATFTCNVRGNPIKTVSWLK 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,539
Number of Sequences: 438
Number of extensions: 5993
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)