BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_M09 (794 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g59530.1 68418.m07460 2-oxoglutarate-dependent dioxygenase, p... 32 0.50 At3g16200.1 68416.m02045 expressed protein 31 1.2 At2g46510.1 68415.m05796 basic helix-loop-helix (bHLH) family pr... 30 2.0 At5g43440.1 68418.m05311 2-oxoglutarate-dependent dioxygenase, p... 29 3.6 At1g76320.1 68414.m08866 far-red impaired responsive protein, pu... 29 3.6 At4g06744.1 68417.m01106 leucine-rich repeat family protein / ex... 28 6.2 At5g13080.1 68418.m01499 WRKY family transcription factor WRKY D... 28 8.2 At3g53590.1 68416.m05919 leucine-rich repeat transmembrane prote... 28 8.2 >At5g59530.1 68418.m07460 2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967); 1-aminocyclopropane-1-carboxylate oxidase kidney bean, PIR:T10818 Length = 364 Score = 31.9 bits (69), Expect = 0.50 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Frame = +2 Query: 275 WMNSTPVAGGAMVKTRRWYHLEQFLRALPMEHAV-QNTEGPEVPPQTQRLQAIRENGVID 451 W++ +P+ G +V + L + + +EH V NT GP + + +IREN + Sbjct: 262 WVDVSPLPGALVVNVGDFLQLITNDKFISVEHRVLANTRGPRISVASFFSSSIRENSTVY 321 Query: 452 NPNGSLL 472 P L+ Sbjct: 322 GPMKELV 328 >At3g16200.1 68416.m02045 expressed protein Length = 452 Score = 30.7 bits (66), Expect = 1.2 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = +3 Query: 294 WRAVRW*KRDVGIISNNSSEHSPWNMRYKIQRDPKSLRRPRGSKRSVRMG 443 W RW K D+ I S HS W +R + P PR ++ +R G Sbjct: 173 WFMARWLKPDMMIESGAFKGHSTWVLRQAMPDTPMISLTPRHPEKYLRKG 222 >At2g46510.1 68415.m05796 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain Length = 566 Score = 29.9 bits (64), Expect = 2.0 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = +2 Query: 623 FGRQLGFAFQMTPKLDIARNVDSKYPDTPGSLQGYS 730 FG+ L A KL++ RN+D ++ TP S +GY+ Sbjct: 263 FGQDLSGAHAYPKKLEVRRNLDERF--TPQSWEGYN 296 >At5g43440.1 68418.m05311 2-oxoglutarate-dependent dioxygenase, putative similar to 2A6 (GI:599622) and tomato ethylene synthesis regulatory protein E8 (SP|P10967) Length = 365 Score = 29.1 bits (62), Expect = 3.6 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 1/67 (1%) Frame = +2 Query: 275 WMNSTPVAGGAMVKTRRWYHLEQFLRALPMEHAVQ-NTEGPEVPPQTQRLQAIRENGVID 451 W++ TPV G ++ + L + L MEH V+ N +GP + + N + Sbjct: 263 WVDVTPVPGALVISIGDFMQLITNDKFLSMEHRVRANRDGPRISVACFVSSGVFPNSTVY 322 Query: 452 NPNGSLL 472 P LL Sbjct: 323 GPIKELL 329 >At1g76320.1 68414.m08866 far-red impaired responsive protein, putative similar to far-red impaired response protein FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101 domain: FAR1 family Length = 732 Score = 29.1 bits (62), Expect = 3.6 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -1 Query: 662 SESFGRQSQVGVQNAGSPQQSEAVL 588 SE+ G SQ G Q+ P+QS+AVL Sbjct: 673 SETVGEGSQEGFQHVADPRQSQAVL 697 >At4g06744.1 68417.m01106 leucine-rich repeat family protein / extensin family protein similar to leucine-rich repeat/extensin 1 (GI:13809918) {Arabidopsis thaliana}; contains Pfam PF00560: Leucine Rich Repeat domains Length = 404 Score = 28.3 bits (60), Expect = 6.2 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = -2 Query: 589 FTPGQRLLLYKAQ--VRPRVEYCSHLW 515 F PGQR + A+ V+P+ YC H+W Sbjct: 350 FFPGQRSMQECAEFFVKPKKYYCPHMW 376 >At5g13080.1 68418.m01499 WRKY family transcription factor WRKY DNA binding protein - Solanum tuberosum, EMBL:AJ278507 Length = 145 Score = 27.9 bits (59), Expect = 8.2 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +2 Query: 515 PEMGAVLHARPDLCFIEQKSLSRRKVPL-RSVEDSQHFGRQLGFAFQMTPKLDI 673 P + H++P+L E++S R +SVE S+ G++ +AFQ ++DI Sbjct: 12 PFLSLKSHSKPELHQGEEESSKVRSEGCSKSVESSKKKGKKQRYAFQTRSQVDI 65 >At3g53590.1 68416.m05919 leucine-rich repeat transmembrane protein kinase, putative CLV1 receptor kinase, Arabidopsis thaliana, EMBL:ATU96879 Length = 783 Score = 27.9 bits (59), Expect = 8.2 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = -3 Query: 606 TERSGTLRLDKDFCSIKHKSGLAWSTAPIS-GPGLPNTSFFHLTPYRREPFGLSIT 442 ++ +G LR + ++K G+ TAP+S L + SFF TPY F IT Sbjct: 249 SDATGNLRTPDN--NVKVSPGICLCTAPLSIDYRLKSPSFFFFTPYIERQFREYIT 302 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,913,242 Number of Sequences: 28952 Number of extensions: 470474 Number of successful extensions: 1464 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1406 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1464 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1794809600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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