Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_M08
(808 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 279 2e-75
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 279 2e-75
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 279 2e-75
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 278 4e-75
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 278 4e-75
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 265 2e-71
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 212 2e-55
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 85 5e-17
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 83 2e-16
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 83 2e-16
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 83 2e-16
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 83 2e-16
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 83 2e-16
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 82 4e-16
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 82 5e-16
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 81 1e-15
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 47 1e-05
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 44 9e-05
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 32 0.39
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 31 1.2
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.6
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 6.3
At1g68080.1 68414.m07777 expressed protein 28 6.3
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 279 bits (684), Expect = 2e-75
Identities = 125/161 (77%), Positives = 139/161 (86%)
Frame = -1
Query: 667 AEKXYHEQLSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKT 488
AEK +HEQLSVAEITN+ EPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKT
Sbjct: 278 AEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKT 337
Query: 487 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 308
KRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDL
Sbjct: 338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDL 397
Query: 307 MYAKRAFVHWYVXXXXXXXXXXXXXEDLAALEKDYEEVGMD 185
MYAKRAFVHWYV EDLAALEKDYEEVG +
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 279 bits (684), Expect = 2e-75
Identities = 125/161 (77%), Positives = 139/161 (86%)
Frame = -1
Query: 667 AEKXYHEQLSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKT 488
AEK +HEQLSVAEITN+ EPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKT
Sbjct: 278 AEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKT 337
Query: 487 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 308
KRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDL
Sbjct: 338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDL 397
Query: 307 MYAKRAFVHWYVXXXXXXXXXXXXXEDLAALEKDYEEVGMD 185
MYAKRAFVHWYV EDLAALEKDYEEVG +
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 279 bits (684), Expect = 2e-75
Identities = 125/161 (77%), Positives = 139/161 (86%)
Frame = -1
Query: 667 AEKXYHEQLSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKT 488
AEK +HEQLSVAEITN+ EPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKT
Sbjct: 278 AEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKT 337
Query: 487 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 308
KRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDL
Sbjct: 338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDL 397
Query: 307 MYAKRAFVHWYVXXXXXXXXXXXXXEDLAALEKDYEEVGMD 185
MYAKRAFVHWYV EDLAALEKDYEEVG +
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 278 bits (681), Expect = 4e-75
Identities = 125/161 (77%), Positives = 136/161 (84%)
Frame = -1
Query: 667 AEKXYHEQLSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKT 488
A K YHEQLSV EITNA EPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKT
Sbjct: 278 AAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKT 337
Query: 487 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 308
KRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDL
Sbjct: 338 KRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDL 397
Query: 307 MYAKRAFVHWYVXXXXXXXXXXXXXEDLAALEKDYEEVGMD 185
MYAKRAFVHWYV EDLAALEKDYEEVG +
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 278 bits (681), Expect = 4e-75
Identities = 125/161 (77%), Positives = 136/161 (84%)
Frame = -1
Query: 667 AEKXYHEQLSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKT 488
A K YHEQLSV EITNA EPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKT
Sbjct: 278 AAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKT 337
Query: 487 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 308
KRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDL
Sbjct: 338 KRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDL 397
Query: 307 MYAKRAFVHWYVXXXXXXXXXXXXXEDLAALEKDYEEVGMD 185
MYAKRAFVHWYV EDLAALEKDYEEVG +
Sbjct: 398 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 265 bits (650), Expect = 2e-71
Identities = 118/157 (75%), Positives = 130/157 (82%)
Frame = -1
Query: 661 KXYHEQLSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKR 482
K YHEQ SV EIT + EP+N M KCDPRHGKYMACC++YRGDVVPKDVN A+A IK KR
Sbjct: 280 KAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKR 339
Query: 481 TIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 302
TIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY
Sbjct: 340 TIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMY 399
Query: 301 AKRAFVHWYVXXXXXXXXXXXXXEDLAALEKDYEEVG 191
+KRAFVHWYV EDLAALEKDYEEVG
Sbjct: 400 SKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 212 bits (518), Expect = 2e-55
Identities = 92/109 (84%), Positives = 102/109 (93%)
Frame = -1
Query: 667 AEKXYHEQLSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKT 488
AEK +HEQLSVAEITN+ EPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ TIKT
Sbjct: 278 AEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKT 337
Query: 487 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 341
KRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+SN+T++AE
Sbjct: 338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 85.0 bits (201), Expect = 5e-17
Identities = 39/123 (31%), Positives = 66/123 (53%)
Frame = -1
Query: 643 LSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 464
L+V E+T + N M DPRHG+Y+ ++RG + K+V+ I ++ K + FV+
Sbjct: 285 LTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVE 344
Query: 463 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 284
W P K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+
Sbjct: 345 WIPNNVKSSVCDIPPT--------GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFL 396
Query: 283 HWY 275
HWY
Sbjct: 397 HWY 399
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 83.4 bits (197), Expect = 2e-16
Identities = 38/126 (30%), Positives = 67/126 (53%)
Frame = -1
Query: 652 HEQLSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 473
+ L+V E+T + N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
Query: 472 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 293
FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ ++
Sbjct: 341 FVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRK 392
Query: 292 AFVHWY 275
AF+HWY
Sbjct: 393 AFLHWY 398
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 83.4 bits (197), Expect = 2e-16
Identities = 38/126 (30%), Positives = 67/126 (53%)
Frame = -1
Query: 652 HEQLSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 473
+ L+V E+T + N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
Query: 472 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 293
FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ ++
Sbjct: 341 FVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRK 392
Query: 292 AFVHWY 275
AF+HWY
Sbjct: 393 AFLHWY 398
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 83.4 bits (197), Expect = 2e-16
Identities = 38/126 (30%), Positives = 67/126 (53%)
Frame = -1
Query: 652 HEQLSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 473
+ L+V E+T + N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY 340
Query: 472 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 293
FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ ++
Sbjct: 341 FVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRK 392
Query: 292 AFVHWY 275
AF+HWY
Sbjct: 393 AFLHWY 398
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 83.4 bits (197), Expect = 2e-16
Identities = 39/123 (31%), Positives = 65/123 (52%)
Frame = -1
Query: 643 LSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 464
L+V E+T + N M DPRHG+Y+ ++RG + K+V+ I I+ K + FV+
Sbjct: 285 LTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVE 344
Query: 463 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 284
W P K + PP ++ A + N+T+I E + R+ +F M+ ++AF+
Sbjct: 345 WIPNNVKSSVCDIPP--------KGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFL 396
Query: 283 HWY 275
HWY
Sbjct: 397 HWY 399
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/126 (30%), Positives = 67/126 (53%)
Frame = -1
Query: 652 HEQLSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 473
+ L+V E+T + N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 340
Query: 472 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 293
FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ ++
Sbjct: 341 FVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRK 392
Query: 292 AFVHWY 275
AF+HWY
Sbjct: 393 AFLHWY 398
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/126 (30%), Positives = 67/126 (53%)
Frame = -1
Query: 652 HEQLSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 473
+ LSV E+T + N M DPRHG+Y+ ++RG + K+V+ + I+ K +
Sbjct: 281 YSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSY 340
Query: 472 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 293
FV+W P K + + P G ++ A + N+T+I E + R+ +F M+ ++
Sbjct: 341 FVEWIPNNVKSSV----CDIAPKG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRK 392
Query: 292 AFVHWY 275
AF+HWY
Sbjct: 393 AFLHWY 398
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 81.8 bits (193), Expect = 5e-16
Identities = 38/126 (30%), Positives = 67/126 (53%)
Frame = -1
Query: 652 HEQLSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 473
+ LSV E+T + N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSY 340
Query: 472 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 293
FV+W P K + + P G ++ A + N+T+I E + R+ +F M+ ++
Sbjct: 341 FVEWIPNNVKSSV----CDIAPTG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRK 392
Query: 292 AFVHWY 275
AF+HWY
Sbjct: 393 AFLHWY 398
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 80.6 bits (190), Expect = 1e-15
Identities = 37/126 (29%), Positives = 66/126 (52%)
Frame = -1
Query: 652 HEQLSVAEITNAXXEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 473
+ L+V E+T + N M DPRHG+Y+ ++RG + K+V+ + ++ K +
Sbjct: 281 YRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSY 340
Query: 472 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 293
FV+W P K + + P G + A + N+T+I E + R+ +F M+ ++
Sbjct: 341 FVEWIPNNVKSSV----CDIAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRK 392
Query: 292 AFVHWY 275
AF+HWY
Sbjct: 393 AFLHWY 398
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/98 (24%), Positives = 54/98 (55%)
Frame = -1
Query: 568 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 389
KY++ + +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V ++
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSG 377
Query: 388 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY 275
+ ML++ T+I ++R ++D + K+AF+ Y
Sbjct: 378 L-----MLASHTSIRHLFSRCLSQYDKLRKKQAFLDNY 410
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/98 (22%), Positives = 54/98 (55%)
Frame = -1
Query: 568 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 389
KY++ + +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V ++
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSG 377
Query: 388 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY 275
+ ML++ T+I +++ ++D + K+AF+ Y
Sbjct: 378 L-----MLASHTSIRHLFSKCLSQYDKLRKKQAFLDNY 410
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 506 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGL 610
GRV I Y D + + H H L TG+ HH+ G+
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGV 94
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 330 ALTTSSTSCTPSVLSCTGTSVRVWRRESXPKPVRTW 223
A ++S + +P+V+S S R WR S P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 425 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 529
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -1
Query: 541 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 398
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 467 DELDSTLGFDGSDGRVHILGYDVTTVQ 547
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,042,793
Number of Sequences: 28952
Number of extensions: 288933
Number of successful extensions: 931
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1833827200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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