BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_M06 (856 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC4G3.15c |||CCR4-Not complex subunit Not2 |Schizosaccharomyce... 113 3e-26 SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 50 3e-07 SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr 1|... 28 1.9 SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 27 3.4 SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 27 4.5 SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 26 5.9 SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 26 5.9 SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces pom... 26 5.9 SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 26 7.8 SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 26 7.8 >SPCC4G3.15c |||CCR4-Not complex subunit Not2 |Schizosaccharomyces pombe|chr 3|||Manual Length = 176 Score = 113 bits (272), Expect = 3e-26 Identities = 64/175 (36%), Positives = 96/175 (54%), Gaps = 4/175 (2%) Frame = -1 Query: 610 LLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDN---LNLTFAGPWADTPCR-PQDMDY 443 LL IR +S+ S +L LG DL ALG +L + ++ PWA+ + P Sbjct: 5 LLPIIRMEDSEMS--TLQLGCDLAALGFDLAPVEEDRLISTNLFSPWAELNTKKPVSQPM 62 Query: 442 HVPPEYLINGSIREKLAPLRLGRYKEDLLFYLFYCFVGDVLQIAAAAELYNREWRYHMEE 263 P N + A ++ ++ ++ LFY+FY DV+Q AAA EL NR WR+H E Sbjct: 63 FKLPACYKN--VNPPPAISKIFQFSDETLFYIFYTMPRDVMQEAAAQELTNRNWRFHKEL 120 Query: 262 KVWISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVPKEFHLDYSKLEGRPQLPPH 98 +VW++ PGM +++T +ERG Y FFD +W+++ K+F L Y+ LE R Q H Sbjct: 121 RVWLTPVPGMKPLQRTPQFERGYYMFFDPIHWKRIKKDFLLMYAALEDRAQSAVH 175 >SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces pombe|chr 1|||Manual Length = 630 Score = 50.4 bits (115), Expect = 3e-07 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Frame = -1 Query: 364 DLLFYLFYCFVGDVLQIAAAAELYNREWRYHMEEKVWISQAPGMPMVEKTSTYERGTYYF 185 D LFY+FY G Q A EL + WR+H + W + M+ T +E G+Y + Sbjct: 543 DTLFYMFYYRPGTYQQYIAGQELKKQSWRFHKKYTTWFQRHEEPKMI--TDEFESGSYRY 600 Query: 184 FDAH-NW-RKVPKEFHLDYSKLE 122 FD +W ++ +F Y LE Sbjct: 601 FDFEGDWVQRKKADFRFTYQYLE 623 >SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr 1|||Manual Length = 767 Score = 27.9 bits (59), Expect = 1.9 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = -1 Query: 223 EKTSTYERGTYYFFDAHNWRKVPKEFHLDYSKLEGR 116 E YE Y++ HN RK+ FHL +++ R Sbjct: 553 ELVPLYEGFQNYYYSCHNGRKLSWLFHLSKGEIKAR 588 >SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster type |Schizosaccharomyces pombe|chr 2|||Manual Length = 827 Score = 27.1 bits (57), Expect = 3.4 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = -2 Query: 351 ICSTVSLVTFYKLRLQQSYTIANGDIIWRRRCGSHK 244 I +V+L + RL Q+YT N ++ G HK Sbjct: 298 ILLSVALFALFSSRLSQAYTFTNNALLCCHELGLHK 333 >SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pombe|chr 1|||Manual Length = 605 Score = 26.6 bits (56), Expect = 4.5 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Frame = -2 Query: 291 IANGDIIWRRRCGSH---KRPACQWS-RRLQRTNAAPTTSSMRTIGERCRK 151 +A+ D+IW R C H K C W L+R +S++ ER K Sbjct: 143 LADDDVIWHRMCEQHINRKCEKCGWGLPLLERNTLYAAKASIQKRYERLTK 193 >SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizosaccharomyces pombe|chr 3|||Manual Length = 849 Score = 26.2 bits (55), Expect = 5.9 Identities = 16/64 (25%), Positives = 25/64 (39%) Frame = -1 Query: 310 AAAELYNREWRYHMEEKVWISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVPKEFHLDYS 131 A+ N RY ++WI Q +P + + + D W+K F +DY Sbjct: 2 ASTATQNASTRY---SQIWIDQPASLPFQDSINLIKE------DKEKWKKEKTAFLIDYD 52 Query: 130 KLEG 119 EG Sbjct: 53 WFEG 56 >SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schizosaccharomyces pombe|chr 1|||Manual Length = 190 Score = 26.2 bits (55), Expect = 5.9 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = -1 Query: 682 QTSPEGKVTNIPDTMIPNQFGIVGLLTFIRAAESDPSLVS 563 + +PE +V I + M N+ G + L F ++ DP++VS Sbjct: 142 EDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVS 181 >SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces pombe|chr 2|||Manual Length = 437 Score = 26.2 bits (55), Expect = 5.9 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = -1 Query: 481 WADTPCRPQDMDYHVPPEYLINGSIREKLAPLRLGRYKED 362 WAD P P D + + Y +G + K L G Y++D Sbjct: 40 WADVPMGPPDPIFGITEAYKKDGDV--KKMNLGAGTYRDD 77 >SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1436 Score = 25.8 bits (54), Expect = 7.8 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = -1 Query: 352 YLFYCFVGDVLQIAAAAELYNREWRY 275 +L CFV D Q A AAEL W Y Sbjct: 1382 FLKRCFVSDPNQRATAAELLMDPWVY 1407 >SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa1|Schizosaccharomyces pombe|chr 1|||Manual Length = 309 Score = 25.8 bits (54), Expect = 7.8 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = -2 Query: 390 LYDSEDIKKIYYSICSTVSLVTFYKLRLQQSYTIANGD 277 L+ + + + Y+S+ TVSL+ +K+R Q TI G+ Sbjct: 81 LFMGDYVDRGYHSV-ETVSLLIAFKIRYPQRITILRGN 117 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,895,198 Number of Sequences: 5004 Number of extensions: 61275 Number of successful extensions: 179 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 175 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 179 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 424464280 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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