SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_M06
         (856 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0276 + 23771233-23771268,23773552-23773897,23774425-237745...   131   6e-31
03_05_1050 - 29966031-29966076,29966180-29966232,29966420-299668...    96   3e-20
02_05_0970 - 33179180-33179210,33179297-33179441,33180307-331803...    89   6e-18
03_05_1049 - 29956379-29956400,29957103-29957188,29957269-299574...    68   8e-12
03_05_0520 + 25139314-25139364,25139580-25139711,25141594-251417...    52   8e-07
03_06_0019 - 31078669-31080081                                         33   0.29 
06_01_0077 + 626126-626137,626222-627421                               33   0.38 
07_03_0762 + 21324550-21325414,21325606-21325746,21325993-213261...    31   1.2  
05_02_0067 + 6298232-6298294,6298532-6299068                           31   1.2  
11_05_0050 + 18665251-18665613,18667280-18667744,18668548-186690...    30   2.0  
11_01_0545 + 4308167-4308496                                           30   2.7  
05_02_0049 - 6083364-6084111,6084140-6084246                           30   2.7  
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494...    30   2.7  
11_01_0311 + 2322511-2323527                                           29   3.6  
03_06_0080 - 31512792-31513046,31514087-31514202,31514797-315149...    29   3.6  
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329...    29   6.2  
01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592     29   6.2  
07_01_0359 - 2633735-2634115,2634345-2634600,2634708-2635552,263...    28   8.3  
06_01_0072 + 596333-597442                                             28   8.3  

>05_05_0276 +
           23771233-23771268,23773552-23773897,23774425-23774541,
           23774712-23774810,23774949-23775016,23775107-23775181,
           23775386-23775931,23776040-23776092,23776163-23776204,
           23776314-23776458,23776541-23776651,23777496-23777921,
           23778116-23778373
          Length = 773

 Score =  131 bits (317), Expect = 6e-31
 Identities = 74/184 (40%), Positives = 101/184 (54%), Gaps = 1/184 (0%)
 Frame = -1

Query: 649 PDTMIPNQFGIVGLLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNLNLTFAGPWADT 470
           PD   P  +G+ GLL  ++  E  P+  SLALG DLT LGL++NS DNL  TF  PW+  
Sbjct: 351 PDPYDP--YGLHGLLRVMKLKEEGPA--SLALGIDLTTLGLDMNSSDNLYKTFGSPWSSE 406

Query: 469 PCRPQDMDYHVPPEYLINGSIREKLAPLRLGRYKEDLLFYLFYCFVGDVLQIAAAAELYN 290
           P + ++  Y +P  Y  +      L  L   R+    LFY+FY    D  Q+ AA E+  
Sbjct: 407 PVK-EEYSYEIPDCY--SSMQPPPLQALHFLRFHLMTLFYIFYSMPQDAAQLYAANEICK 463

Query: 289 REWRYHMEEKVWISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVPKE-FHLDYSKLEGRP 113
             W YH E + W+ +AP    + KT+TYE+G  Y FDA+ W  +PK+ F L Y  +E  P
Sbjct: 464 YGWVYHKELRQWVKRAPNTTPLVKTTTYEQGLCYLFDANIWDAIPKDNFILRYDDIEKIP 523

Query: 112 QLPP 101
            LPP
Sbjct: 524 ALPP 527


>03_05_1050 -
           29966031-29966076,29966180-29966232,29966420-29966845,
           29966983-29967060,29967135-29967220,29969054-29969155,
           29969221-29969427,29970528-29970885,29971011-29971174,
           29971258-29971366,29971595-29971600
          Length = 544

 Score = 96.3 bits (229), Expect = 3e-20
 Identities = 50/113 (44%), Positives = 70/113 (61%)
 Frame = -1

Query: 634 PNQFGIVGLLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNLNLTFAGPWADTPCRPQ 455
           P+ +G++GLL  IR  ++D  L SLALG DLT LGLNLNSPDNL  TF  PW++ P + +
Sbjct: 437 PDPYGLMGLLGVIRMNDAD--LASLALGMDLTTLGLNLNSPDNLYKTFGSPWSNEPAKGE 494

Query: 454 DMDYHVPPEYLINGSIREKLAPLRLGRYKEDLLFYLFYCFVGDVLQIAAAAEL 296
             ++H+P  Y  N      L P+   +++   LFY+FY    D  Q+ AA+EL
Sbjct: 495 P-EFHIPACY--NAEQPPPLQPIHFQKFQTLTLFYIFYSMPRDEAQLCAASEL 544


>02_05_0970 -
           33179180-33179210,33179297-33179441,33180307-33180362,
           33180650-33180691,33180814-33180866,33181059-33181490,
           33181630-33181707,33181785-33181870,33183588-33183689,
           33183754-33183960,33184976-33185336,33185463-33185626,
           33185709-33185817,33186468-33186485
          Length = 627

 Score = 88.6 bits (210), Expect = 6e-18
 Identities = 48/110 (43%), Positives = 66/110 (60%)
 Frame = -1

Query: 625 FGIVGLLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNLNLTFAGPWADTPCRPQDMD 446
           +G++GLL  IR   +D  L SLALG DLT LGLNLNSPDNL  TF  PW++ P + +  +
Sbjct: 447 YGLMGLLGVIRM--NDVDLSSLALGIDLTTLGLNLNSPDNLYKTFGSPWSNEPAKGEP-E 503

Query: 445 YHVPPEYLINGSIREKLAPLRLGRYKEDLLFYLFYCFVGDVLQIAAAAEL 296
           +H P  Y  +      L P+   +++   LFY+FY    D  Q+ AA+EL
Sbjct: 504 FHTPACY--SAEQPPPLQPIHFQKFQTPTLFYIFYSMPRDEAQLCAASEL 551


>03_05_1049 -
           29956379-29956400,29957103-29957188,29957269-29957413,
           29958518-29958813,29959242-29959253
          Length = 186

 Score = 68.1 bits (159), Expect = 8e-12
 Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = -1

Query: 295 YNREWRYHMEEKVWISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVPKE-FHLDYSKLEG 119
           YNR W YH E +VW+++ P +  + KT  YERG+Y  FD +NW  + K+ F L Y ++E 
Sbjct: 104 YNRGWFYHKEVRVWLTRIPNVEPLVKTPHYERGSYGCFDPNNWETIRKDNFVLHYDQIEK 163

Query: 118 RPQLP 104
           +P +P
Sbjct: 164 KPAIP 168


>03_05_0520 + 25139314-25139364,25139580-25139711,25141594-25141731,
            25143191-25143241,25143662-25143751,25143854-25144000,
            25144108-25144218,25144307-25144375,25144777-25145517,
            25145840-25146004,25146376-25146442,25146580-25146704,
            25148714-25148983,25149065-25149199,25149316-25149497,
            25149669-25149744
          Length = 849

 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
 Frame = -1

Query: 364  DLLFYLFYCFVGDVLQIAAAAELYNREWRYHMEEKVWISQAPGMPMVEKTSTYERGTYYF 185
            DLLF+ FY       Q  +A EL  + WR+H +   W  Q    P V  T  YERG+Y +
Sbjct: 754  DLLFFAFYYQQNTYQQFLSARELKKQSWRFHRKYNTWF-QRHVEPQV-TTDEYERGSYVY 811

Query: 184  FDAH--------NW-RKVPKEFHLDYSKLE 122
            FD H         W +++  +F  +Y+ LE
Sbjct: 812  FDFHVIDDGTGSGWCQRIKNDFTFEYNFLE 841


>03_06_0019 - 31078669-31080081
          Length = 470

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = -3

Query: 320 TNCGCSRVIQSRMAISYGGE--GVDLTSAR----HANGREDFNVRTRHLLLLRCAQLEKG 159
           T     R++ +    S+GGE  GVD+ S      H + R D    T  LLL   ++LEK 
Sbjct: 41  TEVNHGRILGALDDASHGGELGGVDMVSISDGLGHGDDRSDLGRLTESLLLAMPSELEKL 100

Query: 158 AERVSFGLQQAGG 120
             R++     AGG
Sbjct: 101 VGRINASASAAGG 113


>06_01_0077 + 626126-626137,626222-627421
          Length = 403

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 121 PPACCNPNETLSAPFSNCAHRRSSRCRVRTLKS-SRPLACR 240
           PP    PN  + AP+S+  HR+   C V  L + + PL C+
Sbjct: 84  PPLLVRPNVRVKAPYSSNGHRKLRSCEVIDLANRNTPLRCQ 124


>07_03_0762 +
           21324550-21325414,21325606-21325746,21325993-21326177,
           21326200-21326410,21326526-21326769,21326853-21327003,
           21327089-21327439
          Length = 715

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
 Frame = +1

Query: 442 DNPCP-VVCKAYPPMGQQTSS*GYQVNLN----SILKQSNPVP-MLATLD*GPIP 588
           D P P V+C  YPP G  + +  YQVNL+    ++ K ++  P M AT   G +P
Sbjct: 33  DEPPPWVLCGPYPPSGNYSKNGTYQVNLDLLSTTLPKNTSSSPAMYATGTVGDVP 87


>05_02_0067 + 6298232-6298294,6298532-6299068
          Length = 199

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = -3

Query: 314 CG-CSRVIQSRMAISYGGEGVDLTSARHANGREDFNVRTRHLLLLRCAQLEKGAERVSFG 138
           CG C+  ++ RM    GG GV+     H     DFN  TR    L  A   +   R SF 
Sbjct: 105 CGLCAEAVRERMRGGGGGGGVEAALRWHMEVCRDFNSTTRLNPKLSLAGSMRDIARRSFN 164

Query: 137 LQ-QAGGSAAVT 105
            +  A  SAA T
Sbjct: 165 RRTTASTSAAAT 176


>11_05_0050 +
           18665251-18665613,18667280-18667744,18668548-18669037,
           18669115-18669143
          Length = 448

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/59 (23%), Positives = 27/59 (45%)
 Frame = +1

Query: 109 TAADPPACCNPNETLSAPFSNCAHRRSSRCRVRTLKSSRPLACRALVRSTPSPPYDIAI 285
           + A  P   NP  + S+      H R+ +C+V T+K  +   C  + +   + PY + +
Sbjct: 230 SGATTPVNANPPGSRSSDKQPICHCRAGKCKVETIKGQKYYVC-CIQKGQGACPYQVPV 287


>11_01_0545 + 4308167-4308496
          Length = 109

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 647 GYNDTXPIWNSRSIDFYPCCGIG 579
           GYN     W S+ I  Y CCG G
Sbjct: 80  GYNPGSACWTSKDIKLYCCCGHG 102


>05_02_0049 - 6083364-6084111,6084140-6084246
          Length = 284

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
 Frame = +1

Query: 34  TCTFYITKLQ*SERR--GCAT*AHGAVTAADPPACCNPNETLSAPFSNCAHRRSSRCRVR 207
           T +F   K Q   RR  G    A  A  AA    C + +   S+P S  A    S  R  
Sbjct: 26  TASFPAPKSQMRRRRSGGAGVPADAASAAASAGRCWSSSSWRSSPPSPAARSTCSTARTA 85

Query: 208 TLKSSRPLACRAL-VRSTPSPP 270
               SRP    AL + S+P+ P
Sbjct: 86  PASPSRPSKLTALNLSSSPTSP 107


>03_05_0780 +
           27646936-27647084,27647168-27647289,27649380-27649458,
           27650346-27650427,27650483-27650600,27650695-27651050,
           27651404-27652222,27652846-27653265,27653426-27653437
          Length = 718

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
 Frame = +1

Query: 130 CCNPNETLSAPFSNCAHRRSSRCRVRTL---KSSRPLACRALVRSTPSPP 270
           C  P   LS P S C H R   C V T+     SR +    +  S+  PP
Sbjct: 517 CRRPATVLSPPTSRCCHHRYEICAVATVAVAPCSRAVVADDVAASSAVPP 566


>11_01_0311 + 2322511-2323527
          Length = 338

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +1

Query: 100 GAVTAADPPACCNPNETLSAPFSNCAHRRSSRCRVRTLKSSRPLACRALVRSTPSPPYDI 279
           GAV  AD  AC  P+ T     S C+   S+     +   S  ++ RA + + P+PP  +
Sbjct: 23  GAVRVADVAACTAPSST---RVSTCSSSSSTTASSSSPTLSVTVSYRATLLAAPAPPLQL 79

Query: 280 AI 285
            +
Sbjct: 80  RL 81


>03_06_0080 -
           31512792-31513046,31514087-31514202,31514797-31514911,
           31514997-31515056,31515619-31515688,31515952-31515986,
           31516094-31516231,31516369-31516737
          Length = 385

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 484 PWAD-TPCRPQDMDYHVPPEYLINGSIREK 398
           PW   TPC   D+ + VPPE+  +G +  K
Sbjct: 149 PWTQPTPCSHVDLKFPVPPEHCTSGIMDNK 178


>02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,
            3299528-3299531,3299814-3299949,3300034-3300090,
            3301689-3301786,3301876-3301947,3302056-3302228,
            3302552-3302698,3303113-3303336,3305300-3305306,
            3305634-3305800,3306033-3306068,3306787-3307004,
            3307115-3307172,3307761-3307842,3308045-3308207,
            3308594-3308598,3308700-3308885,3308969-3309548,
            3309642-3309774,3309880-3309948,3310184-3310395,
            3310654-3310891,3311228-3311386,3311501-3311926,
            3312010-3312447,3312593-3312712,3312784-3313266,
            3313471-3314009,3314178-3314667,3314836-3314904,
            3315735-3315839,3315940-3316158,3316254-3316508,
            3316602-3316651,3317175-3317284,3317372-3317454,
            3317560-3317772,3317870-3318040
          Length = 2391

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 598  IRAAESDPSLVSLALGQDLTALGLNLNSPDNL 503
            ++A  SDP++  L L   +  LGLNL S D L
Sbjct: 2219 VKAFNSDPTIDVLLLTTHVGGLGLNLTSADTL 2250


>01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592
          Length = 853

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 21/75 (28%), Positives = 28/75 (37%)
 Frame = +1

Query: 73  RRGCAT*AHGAVTAADPPACCNPNETLSAPFSNCAHRRSSRCRVRTLKSSRPLACRALVR 252
           RRG  + A  A  AAD P C +   +  A  + CAH        R   +     CR    
Sbjct: 303 RRGSRSSARCAA-AADHPGCSDKLTSPDAAVAPCAHDTKILFVDRVEDADAAKKCRHTAA 361

Query: 253 STPSPPYDIAIRDCI 297
             P P  D    +C+
Sbjct: 362 PPPPPTKDPTTVECV 376


>07_01_0359 -
           2633735-2634115,2634345-2634600,2634708-2635552,
           2635681-2635956,2636778-2636941,2637924-2638197
          Length = 731

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 178 HRRSSRCRVRTLKSSRPLACRALVRSTPSPPYDIAIRDCI 297
           H  + R   R+    +P     LVR  P PP D  I+D +
Sbjct: 176 HVSNMRAAARSTPDVKPEEFAVLVRDVPKPPPDQTIKDSV 215


>06_01_0072 + 596333-597442
          Length = 369

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 541 TALGLNLNSPDNLNLTFAGPWA 476
           ++LGL LN P NL    AGPW+
Sbjct: 119 SSLGLFLNCPKNLRNDDAGPWS 140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,170,084
Number of Sequences: 37544
Number of extensions: 445843
Number of successful extensions: 1344
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -