Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_M06
(856 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19268| Best HMM Match : NOT2_3_5 (HMM E-Value=0) 173 2e-43
SB_47441| Best HMM Match : NOT2_3_5 (HMM E-Value=0) 56 5e-08
SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25) 30 2.1
SB_55021| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-45) 30 2.1
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_55713| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8) 29 3.6
SB_24692| Best HMM Match : Disintegrin (HMM E-Value=7.6e-23) 29 4.8
SB_42261| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18) 29 6.4
SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_19268| Best HMM Match : NOT2_3_5 (HMM E-Value=0)
Length = 165
Score = 173 bits (421), Expect = 2e-43
Identities = 75/112 (66%), Positives = 90/112 (80%)
Frame = -1
Query: 436 PPEYLINGSIREKLAPLRLGRYKEDLLFYLFYCFVGDVLQIAAAAELYNREWRYHMEEKV 257
PPEY IN IREKLAP++L RY EDLLFYL+Y GD+LQ+AAAAELY R+WRYH EE+V
Sbjct: 50 PPEYRINSFIREKLAPIKLSRYGEDLLFYLYYTNGGDILQLAAAAELYARDWRYHKEERV 109
Query: 256 WISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVPKEFHLDYSKLEGRPQLPP 101
W+++APG+ K++ YERGTYYFFD WRKVPKEFHL+Y KLE +P L P
Sbjct: 110 WLTRAPGVEPQVKSNNYERGTYYFFDCQAWRKVPKEFHLEYDKLEEKPTLHP 161
>SB_47441| Best HMM Match : NOT2_3_5 (HMM E-Value=0)
Length = 584
Score = 55.6 bits (128), Expect = 5e-08
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = -1
Query: 376 RYKEDLLFYLFYCFVGDVLQIAAAAELYNREWRYHMEEKVWISQAPGMPMVEKTSTYERG 197
R + LF++FY G Q AA L + WR+H + +W + + T YE+G
Sbjct: 496 RLSPETLFFIFYYQEGTRAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKAI--TDEYEQG 553
Query: 196 TYYFFDAHNWRKVPKE-FHLDYSKLEGR 116
TY +FD W + KE F +Y LE +
Sbjct: 554 TYIYFDYEKWGQRKKEGFTFEYRYLEDK 581
>SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25)
Length = 190
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 682 QTSPEGKVTNIPDTMIPNQFGIVGLLTFIRAAESDPSLVSL 560
+++PE + I M N G + L FI A+SDPS+V L
Sbjct: 142 ESTPEKRTDKIFRQMDKNLDGKLSLAEFIEGAKSDPSIVRL 182
>SB_55021| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-45)
Length = 348
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 97 HGAVTAADPPACCNPNETLSAPFSNCAHRRSS 192
HG T D C +P+E +P +NC ++ SS
Sbjct: 146 HGTGTCEDKDECASPDENDCSPDANCINKLSS 177
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -1
Query: 649 PDTMIPNQFGIVGLLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNLNLTF 491
P +P G V L +S P VSL++ D G++ P++L +TF
Sbjct: 1757 PSKTVPEGAGTVNLTLTRTGDKSVPHTVSLSIKNDTAYSGVDFTPPEDLLVTF 1809
>SB_55713| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8)
Length = 129
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 622 QIGXVSLYPVCXXLCLQEKSVSLCASCLVRVQC 720
Q G V + P+C ++ VSLCA C+ V C
Sbjct: 20 QCGRVVMNPICTCRYVRSVDVSLCAQCVRVVIC 52
>SB_24692| Best HMM Match : Disintegrin (HMM E-Value=7.6e-23)
Length = 1592
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 130 CCNPNETLSAPFSNCAHRRSSRCRVRTLKSSRPLACRALVRSTPSP 267
CCNP+ + C+ RR CR ++ S + CRA S P
Sbjct: 108 CCNPHTCRLYAHAQCSDRRDKCCRNCSIAPS-GMPCRAAADSCDVP 152
>SB_42261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 190 YFFDAHNWRKVPKEFHLDYSKLEGRPQLPP 101
Y+ HN + FHL +K+EG +LPP
Sbjct: 157 YYVYHHNVITITSVFHLTETKMEGGGELPP 186
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 121 PPACCNPNETLSAPFSNCAHRRSSRCRVRTLKSSRPLACRALVRSTPSPP 270
P CC + + + CA + S+C + K P AL+ +TP+PP
Sbjct: 1812 PVMCCKNSSPATECPTICASKCISKCPEKCCKQPEPQP--ALLSTTPTPP 1859
>SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18)
Length = 865
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 205 RTLKSSRPLACRALVRSTPSPPYDIAIRDCITLLQPQFVKRHQRNSRTN 351
R L + P R +R T SP I ++ QP F +Q+N +TN
Sbjct: 262 RKLLGNIPPVPRYYIRVTRSPVRIIPLQHSPVAFQPAFAVAYQQNQKTN 310
>SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -2
Query: 321 YKLRLQQSYTIANGDIIWRRRCGSHKRPACQWSRRLQRTNAAPTT-SSMRTIGERCRKSF 145
+K +L + D+ RC P+ Q +R Q+T A PTT S C K+F
Sbjct: 6 HKCQLCSRSFLTQPDLSRHMRCHEKMTPSKQETREEQKTTAVPTTMDSSAYQCNNCSKAF 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,515,360
Number of Sequences: 59808
Number of extensions: 487565
Number of successful extensions: 1175
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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