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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_M05
         (822 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch...   347   2e-96
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar...   343   1e-95
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces...   144   1e-35
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|...    78   1e-15
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    36   0.007
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||...    30   0.35 
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1...    29   0.60 
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||...    29   1.1  
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo...    28   1.4  
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl...    28   1.4  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    28   1.8  
SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces...    27   4.3  
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||...    26   5.6  
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch...    26   5.6  
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||...    26   7.4  
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c...    26   7.4  
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz...    26   7.4  
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po...    25   9.8  
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2...    25   9.8  

>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 455

 Score =  347 bits (852), Expect = 2e-96
 Identities = 152/189 (80%), Positives = 171/189 (90%)
 Frame = -1

Query: 711 DLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHG 532
           DL EFQTNLVPYPRIHFPLVTY+P++SA KA+HE  SV EITN CFEP NQMVKCDPR G
Sbjct: 255 DLNEFQTNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTG 314

Query: 531 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 352
           +YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI Y+PP  VPG  +AK
Sbjct: 315 RYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAK 374

Query: 351 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 172
           V RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+
Sbjct: 375 VNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALER 434

Query: 171 DYEEVGMDS 145
           DYEEVG DS
Sbjct: 435 DYEEVGQDS 443



 Score = 29.1 bits (62), Expect = 0.80
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -2

Query: 770 IGQIVSSITAXLRFXGAXN 714
           I Q+VSSITA LRF G+ N
Sbjct: 235 IAQVVSSITASLRFAGSLN 253


>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
           2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 449

 Score =  343 bits (844), Expect = 1e-95
 Identities = 152/189 (80%), Positives = 169/189 (89%)
 Frame = -1

Query: 711 DLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHG 532
           DL EFQTNLVPYPRIHFPLVTYAP++SA KA+HE  SV EITN CFEP NQMVKCDPR G
Sbjct: 251 DLAEFQTNLVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAG 310

Query: 531 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 352
           +YMA C+LYRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI  +PP  + G ++AK
Sbjct: 311 RYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAK 370

Query: 351 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 172
           V RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+
Sbjct: 371 VDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALER 430

Query: 171 DYEEVGMDS 145
           DYEEVG DS
Sbjct: 431 DYEEVGQDS 439



 Score = 29.1 bits (62), Expect = 0.80
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -2

Query: 770 IGQIVSSITAXLRFXGAXN 714
           I Q+VSSITA LRF G+ N
Sbjct: 231 IAQVVSSITASLRFEGSLN 249


>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 448

 Score =  144 bits (349), Expect = 1e-35
 Identities = 71/191 (37%), Positives = 112/191 (58%), Gaps = 3/191 (1%)
 Frame = -1

Query: 711 DLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHG 532
           DL +   N+VP+PR+HF +V +AP+ +   +  + +SV E+T   F+  N MV  DPRHG
Sbjct: 249 DLRKLAVNMVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPRHG 308

Query: 531 KYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 352
           +Y+    L+RG V  K+V+  I +++TK +  FV+W P      +   PP      DL  
Sbjct: 309 RYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK-----DL-- 361

Query: 351 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAA 181
            + +   + N+T+I E + RL  +F  M+ ++AF+HWY GEGM+E EF+EA     DL +
Sbjct: 362 -KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 180 LEKDYEEVGMD 148
             + Y+E G+D
Sbjct: 421 EYQQYQEAGID 431


>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 446

 Score = 78.2 bits (184), Expect = 1e-15
 Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
 Frame = -1

Query: 711 DLTEFQTNLVPYPRIHFPLVTYAPVISA---EKAYHEQLSVAEITNACFEPANQMVKCDP 541
           DL     +L+P PR HF L +Y P  +    E     + +V ++      P NQMV  +P
Sbjct: 252 DLVSIIASLIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNP 311

Query: 540 -RHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 364
            +   +++   + +G+  P DV+ ++  I+ +R   F+ W P   +V ++ + P +    
Sbjct: 312 SKKSCFISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNH 371

Query: 363 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEARE 193
            ++ +     ML+N T+IA  + R   ++D +  + AF+  Y  E + E    EF  +R+
Sbjct: 372 RVSGL-----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRD 426

Query: 192 DLAALEKDYE 163
            +A L  +YE
Sbjct: 427 VVADLINEYE 436


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 35.9 bits (79), Expect = 0.007
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
 Frame = -2

Query: 713 GTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTM--NSFPSPRSQTHASSPPTRW*NATP 540
           GTS S  L+   +  +++    T  S+ P  PT+   S  +P + T+ ++  +    +TP
Sbjct: 380 GTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTP 439

Query: 539 VMASTWLAVCCTVATSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHP 381
           V ++      CT +TS P   T   + S P   +N +T       S   TS P
Sbjct: 440 VTSTPLATTNCTTSTSVPY--TSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTP 490



 Score = 31.5 bits (68), Expect = 0.15
 Identities = 29/105 (27%), Positives = 51/105 (48%)
 Frame = -2

Query: 701 SSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTW 522
           S+ + +  TPV++S++  T  SS P   T      P + T+ ++  +    +TPV ++  
Sbjct: 499 STSVPYTSTPVTSSNY--TISSSTPVTST------PVTTTNCTTSTSVLYTSTPVTSTPL 550

Query: 521 LAVCCTVATSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 387
               CT +TS P   T P   S  ++ S++     PV+ +  TTS
Sbjct: 551 ATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTS 594



 Score = 29.5 bits (63), Expect = 0.60
 Identities = 27/107 (25%), Positives = 49/107 (45%)
 Frame = -2

Query: 707 SPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMAS 528
           +P+   T   TP++T++   T  +S+P   T  +  +P + T+ ++  +    +TPV ++
Sbjct: 410 TPTVPPTSSSTPLTTTNC--TTSTSVPYTSTPVT-STPLATTNCTTSTSVPYTSTPVTST 466

Query: 527 TWLAVCCTVATSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTS 387
                 CT +TS P   T   + S P   +N +T       S   TS
Sbjct: 467 PLTTTNCTTSTSIPY--TSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511



 Score = 25.4 bits (53), Expect = 9.8
 Identities = 43/153 (28%), Positives = 55/153 (35%), Gaps = 8/153 (5%)
 Frame = -2

Query: 668 STSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVATSY 489
           STS  S T  SS P   T  S       T  S PPT   ++     +  +    T +TS 
Sbjct: 94  STSSASTTGSSSSPLPSTSTS-----CTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSI 148

Query: 488 PRM*TRPSLP---SKP----SVLSNSSTGVQPVSRSVS-TTSHPPWCPEATWPRFNVXXX 333
           P   T  S     S P    S    +ST + P   S S +T   P  P  +    ++   
Sbjct: 149 PIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIP 208

Query: 332 XXXXXXXXPKLGLALTTSSTSCTPSVLSCTGTS 234
                         L T+STSCT S    TG S
Sbjct: 209 PTSTSSTDTNSS-PLPTTSTSCTTSTSIPTGGS 240


>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 534

 Score = 30.3 bits (65), Expect = 0.35
 Identities = 23/81 (28%), Positives = 42/81 (51%)
 Frame = -2

Query: 668 STSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVATSY 489
           STS  + T  SS   RP  +S  S    +H SS  ++  ++ PV ++ +     + ++S+
Sbjct: 377 STSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKS-SSAPVSSAFYHNSTSSRSSSH 435

Query: 488 PRM*TRPSLPSKPSVLSNSST 426
               +  SL SKP + ++SS+
Sbjct: 436 SSSHSLSSLSSKPILTASSSS 456


>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 857

 Score = 29.5 bits (63), Expect = 0.60
 Identities = 23/89 (25%), Positives = 32/89 (35%)
 Frame = -2

Query: 635 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVATSYPRM*TRPSLPS 456
           S+P+ P     P   S     + P       P + S        V    P +  RP++P 
Sbjct: 513 SVPQPPAAPVVPEAPSVHQPPAAPV-----APEVPSAPQRPAAPVVPEAPSVPQRPAVPV 567

Query: 455 KPSVLSNSSTGVQPVSRSVSTTSHPPWCP 369
            P  LS     V PV+  V +   PP  P
Sbjct: 568 VPEALSVPQPPVAPVAPEVPSVPQPPVAP 596



 Score = 27.1 bits (57), Expect = 3.2
 Identities = 24/90 (26%), Positives = 32/90 (35%)
 Frame = -2

Query: 635 SLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVATSYPRM*TRPSLPS 456
           S+P+RP +   P   S       P       P +    +A     A S P+    P  P 
Sbjct: 558 SVPQRPAVPVVPEALSVPQPPVAPVA--PEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPE 615

Query: 455 KPSVLSNSSTGVQPVSRSVSTTSHPPWCPE 366
            PSV    +  V P + SV      P  PE
Sbjct: 616 VPSVPQRPAVPVVPEAPSVPQPPAAPVVPE 645


>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 3227

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 20/73 (27%), Positives = 34/73 (46%)
 Frame = +1

Query: 463 SDGRVHILGYDVATVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGKLFMVGLLGRDDW 642
           S G   +LGY ++     A++V+A + V   HL+ G      D  + K       G D  
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK-------GLDML 459

Query: 643 RVRDQWEVDTGVR 681
             R Q+E++ G++
Sbjct: 460 VDRVQYELEAGLQ 472


>SPCC18.03 |||shuttle craft like transcriptional
           regulator|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1077

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -1

Query: 591 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 466
           +  ACFEP N    C   H K   C  L    +  KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401


>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
           subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 709

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = -2

Query: 299 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--RRITKKSAWTPLKARVR 126
           G+   TS TS T S       S++     S+P P   W P+        S+ TP+   V 
Sbjct: 148 GVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207

Query: 125 EPKSTK 108
           EP+ TK
Sbjct: 208 EPRFTK 213


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -2

Query: 704  PSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTR 558
            P+++      P S +    T +SS+P  P  N+ PSP S + AS+ P R
Sbjct: 1232 PTAKAPPVPAPSSEAPSVSTPRSSVPS-PHSNASPSPTSSSMASAAPAR 1279


>SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 476

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 27/95 (28%), Positives = 36/95 (37%)
 Frame = -2

Query: 662 SHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVATSYPR 483
           SH  ++ Q S P    ++  PS  S T  + P       +P  +   +      A   PR
Sbjct: 242 SHQPQSTQFSPPANDNISKLPS--SFTIVNDPLK-----SPSSSRLRIRNITLCADKIPR 294

Query: 482 M*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPP 378
                 LP K  VL    T +  VSR   TTS  P
Sbjct: 295 PLLNSKLPRKTLVLDLDETLIHSVSRGSRTTSGQP 329


>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1158

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 641 QSSLPRRPTMNSFPSPRSQTHASSPPTR 558
           + SLPRRP+     +P S T ++ PP +
Sbjct: 738 RGSLPRRPSSALLTNPISITKSNPPPVK 765


>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 628

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
 Frame = -2

Query: 467 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 381
           +LP KPS+   +++S   V+P S   STTS+P
Sbjct: 5   TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36


>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 751

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -2

Query: 707 SPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSP 567
           SPS  LT  L   S++  S  + + + R+ T +S  SP+ Q+  S+P
Sbjct: 619 SPSKMLT-TLRNNSSTFPSLRKNAMIARKSTADSLSSPKRQSVPSTP 664


>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 474

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 16/51 (31%), Positives = 31/51 (60%)
 Frame = -2

Query: 680 LTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMAS 528
           LTP + S +S +  +S  +R ++N+ PS  + +H+SS  T   +  PV+++
Sbjct: 130 LTPKNPSLFSSSNAAS--QRGSLNTAPSNFAYSHSSSLQTSASSRPPVLSN 178


>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1273

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 22/84 (26%), Positives = 36/84 (42%)
 Frame = -2

Query: 674 PVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVAT 495
           P+  SH S  +  S+ R    +       + H S  PT+  +AT +  S   AV     T
Sbjct: 253 PLDASHLSSQQLLSMYRDQVSHGVTPSTFRNHESFMPTQLVSATELSKSVDNAVLPIPPT 312

Query: 494 SYPRM*TRPSLPSKPSVLSNSSTG 423
           + P +   P   S P + S +++G
Sbjct: 313 TAPAV-VSPPASSFPLMSSAATSG 335


>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 665

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -2

Query: 470 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 375
           P  PS+P+++SN ST  G+Q V   V   +   W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564


>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 1217

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 36/139 (25%), Positives = 53/139 (38%)
 Frame = -2

Query: 620  PTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTVATSYPRM*TRPSLPSKPSVL 441
            PT  S P PR  T  S+   R     PV+ +         AT    M   P+  SKP+ +
Sbjct: 964  PTSKSKPFPRLATGGSTAAAR--GPRPVVQNK------PAATKPVSM---PAAKSKPAPM 1012

Query: 440  SNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVXXXXXXXXXXXPKLGLALTTSSTSCTP 261
            +N      PVS +  T + PP    A   R N              +  A T S++   P
Sbjct: 1013 AN------PVSTAQQTQNRPP--APAMQARPNTTQAAAPVTSTTTTIKQATTVSASKPAP 1064

Query: 260  SVLSCTGTSVRVWRRESSP 204
            S ++   +S     + S+P
Sbjct: 1065 STVTSAASSPSNISKPSAP 1083


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,107,195
Number of Sequences: 5004
Number of extensions: 67594
Number of successful extensions: 252
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 402440190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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