SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_M04
         (836 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    27   0.18 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    27   0.18 
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    27   0.18 
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    27   0.18 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.56 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   6.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   9.1  

>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = -1

Query: 716 DGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLS-VAEITNACFEPAKPDG 540
           D  +N  L +   N              A +  A + YH+  S V +  N+C +PA P G
Sbjct: 65  DSMVNYTLGQHHHNGAAVSAASSVSAASASMAVAAQFYHQAASAVVDPLNSCSQPAAPGG 124

Query: 539 E 537
           +
Sbjct: 125 Q 125


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = -1

Query: 716 DGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLS-VAEITNACFEPAKPDG 540
           D  +N  L +   N              A +  A + YH+  S V +  N+C +PA P G
Sbjct: 124 DSMVNYTLGQHHHNGAAVSAASSVSAASASMAVAAQFYHQAASAVVDPLNSCSQPAAPGG 183

Query: 539 E 537
           +
Sbjct: 184 Q 184


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = -1

Query: 716 DGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLS-VAEITNACFEPAKPDG 540
           D  +N  L +   N              A +  A + YH+  S V +  N+C +PA P G
Sbjct: 65  DSMVNYTLGQHHHNGAAVSAASSVSAASASMAVAAQFYHQAASAVVDPLNSCSQPAAPGG 124

Query: 539 E 537
           +
Sbjct: 125 Q 125


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = -1

Query: 716 DGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLS-VAEITNACFEPAKPDG 540
           D  +N  L +   N              A +  A + YH+  S V +  N+C +PA P G
Sbjct: 124 DSMVNYTLGQHHHNGAAVSAASSVSAASASMAVAAQFYHQAASAVVDPLNSCSQPAAPGG 183

Query: 539 E 537
           +
Sbjct: 184 Q 184


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 664  PPVSTSHWSRTRQSSLPRRPT 602
            PP +T+HW     +S   RPT
Sbjct: 1176 PPSTTNHWQTKTTTSTTTRPT 1196



 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 447  PSKPSVLSNSSTGVQPVSRSVSTTSHP 367
            P+KPS    S+T       + STT+ P
Sbjct: 1169 PTKPSYRPPSTTNHWQTKTTTSTTTRP 1195


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 112 PHPRLQRSPCRLLRNPSRGQPGP 180
           PHP L   P  L  +P+   PGP
Sbjct: 232 PHPGLSPHPPHLSSHPAIVTPGP 254


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 112 PHPRLQRSPCRLLRNPSRGQPGP 180
           PHP L   P  L  +P+   PGP
Sbjct: 124 PHPGLSPHPPHLSSHPAIVTPGP 146


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 510 WLAVCCTVVTSYPRM 466
           W  VC  VV  YPR+
Sbjct: 166 WREVCTFVVQVYPRL 180


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 457 PRSHPWVRRHHGTAYSKPCTCHDGSRISPSGL 552
           PRS    RR+ G A      C +  R+ P+G+
Sbjct: 279 PRSQ---RRYTGRATCDCPNCQEAERLGPAGV 307


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 490 GTAYSKPCTCHDGSRISPSGLAGS 561
           G A++ P   HD    SP G  G+
Sbjct: 50  GNAHTGPTGTHDAGFPSPRGALGA 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,162
Number of Sequences: 336
Number of extensions: 4127
Number of successful extensions: 27
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -