Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_M04
(836 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 279 1e-75
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 279 1e-75
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 279 1e-75
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 279 2e-75
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 279 2e-75
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 278 4e-75
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 178 4e-45
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 100 2e-21
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 97 1e-20
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 97 1e-20
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 97 1e-20
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 97 1e-20
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 97 1e-20
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 95 7e-20
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 95 7e-20
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 94 9e-20
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 54 2e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 51 1e-06
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.31
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 30 1.7
At3g24550.1 68416.m03083 protein kinase family protein contains ... 30 1.7
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.7
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 30 2.2
At3g22830.1 68416.m02877 heat shock transcription factor family ... 29 3.8
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 5.1
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 6.7
At1g68080.1 68414.m07777 expressed protein 28 6.7
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 6.7
At3g26855.1 68416.m03360 hypothetical protein 28 8.8
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 279 bits (685), Expect = 1e-75
Identities = 122/144 (84%), Positives = 134/144 (93%)
Frame = -2
Query: 565 ASSPPNQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 386
A P + M KCD RHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 385 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 206
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 205 EGEFSEAREDLAALEKDYEEVGMD 134
EGEFSEAREDLAALEKDYEEVG +
Sbjct: 415 EGEFSEAREDLAALEKDYEEVGAE 438
Score = 88.6 bits (210), Expect = 4e-18
Identities = 42/55 (76%), Positives = 46/55 (83%)
Frame = -1
Query: 716 DGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 552
DGALN D+TEFQ N PRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA
Sbjct: 245 DGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPA 299
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 279 bits (685), Expect = 1e-75
Identities = 122/144 (84%), Positives = 134/144 (93%)
Frame = -2
Query: 565 ASSPPNQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 386
A P + M KCD RHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 385 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 206
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 205 EGEFSEAREDLAALEKDYEEVGMD 134
EGEFSEAREDLAALEKDYEEVG +
Sbjct: 415 EGEFSEAREDLAALEKDYEEVGAE 438
Score = 88.6 bits (210), Expect = 4e-18
Identities = 42/55 (76%), Positives = 46/55 (83%)
Frame = -1
Query: 716 DGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 552
DGALN D+TEFQ N PRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA
Sbjct: 245 DGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPA 299
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 279 bits (685), Expect = 1e-75
Identities = 122/144 (84%), Positives = 134/144 (93%)
Frame = -2
Query: 565 ASSPPNQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 386
A P + M KCD RHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 385 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME 206
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGME
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGME 414
Query: 205 EGEFSEAREDLAALEKDYEEVGMD 134
EGEFSEAREDLAALEKDYEEVG +
Sbjct: 415 EGEFSEAREDLAALEKDYEEVGAE 438
Score = 88.6 bits (210), Expect = 4e-18
Identities = 42/55 (76%), Positives = 46/55 (83%)
Frame = -1
Query: 716 DGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 552
DGALN D+TEFQ N PRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA
Sbjct: 245 DGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPA 299
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 279 bits (684), Expect = 2e-75
Identities = 121/141 (85%), Positives = 132/141 (93%)
Frame = -2
Query: 556 PPNQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 377
P + M KCD RHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINY
Sbjct: 298 PASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINY 357
Query: 376 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 197
QPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGE
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 196 FSEAREDLAALEKDYEEVGMD 134
FSEAREDLAALEKDYEEVG +
Sbjct: 418 FSEAREDLAALEKDYEEVGAE 438
Score = 86.2 bits (204), Expect = 2e-17
Identities = 41/55 (74%), Positives = 44/55 (80%)
Frame = -1
Query: 716 DGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 552
DGA+N D+TEFQ N PRIHF L +YAPVISA KAYHEQLSV EITNA FEPA
Sbjct: 245 DGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPA 299
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 279 bits (684), Expect = 2e-75
Identities = 121/141 (85%), Positives = 132/141 (93%)
Frame = -2
Query: 556 PPNQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 377
P + M KCD RHGKYMACC++YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINY
Sbjct: 298 PASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINY 357
Query: 376 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 197
QPPTVVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGE
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 196 FSEAREDLAALEKDYEEVGMD 134
FSEAREDLAALEKDYEEVG +
Sbjct: 418 FSEAREDLAALEKDYEEVGAE 438
Score = 86.2 bits (204), Expect = 2e-17
Identities = 41/55 (74%), Positives = 44/55 (80%)
Frame = -1
Query: 716 DGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 552
DGA+N D+TEFQ N PRIHF L +YAPVISA KAYHEQLSV EITNA FEPA
Sbjct: 245 DGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPA 299
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 278 bits (681), Expect = 4e-75
Identities = 122/151 (80%), Positives = 132/151 (87%)
Frame = -2
Query: 592 FPSPRSQTHASSPPNQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 413
F P T P N M KCD RHGKYMACC++YRGDVVPKDVN A+A IK KRTIQFVD
Sbjct: 286 FSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVD 345
Query: 412 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 233
WCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFV
Sbjct: 346 WCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFV 405
Query: 232 HWYVGEGMEEGEFSEAREDLAALEKDYEEVG 140
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436
Score = 78.6 bits (185), Expect = 5e-15
Identities = 36/55 (65%), Positives = 42/55 (76%)
Frame = -1
Query: 716 DGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 552
DGA+N D+TEFQ N PRIHF L +YAPVIS+ KAYHEQ SV EIT + FEP+
Sbjct: 245 DGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPS 299
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 178 bits (433), Expect = 4e-45
Identities = 76/92 (82%), Positives = 84/92 (91%)
Frame = -2
Query: 565 ASSPPNQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG 386
A P + M KCD RHGKYMACC++YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK G
Sbjct: 295 AFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCG 354
Query: 385 INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 290
INYQPPTVVPGGDLAKVQRAVCM+SN+T++AE
Sbjct: 355 INYQPPTVVPGGDLAKVQRAVCMISNSTSVAE 386
Score = 88.6 bits (210), Expect = 4e-18
Identities = 42/55 (76%), Positives = 46/55 (83%)
Frame = -1
Query: 716 DGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPA 552
DGALN D+TEFQ N PRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA
Sbjct: 245 DGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPA 299
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/135 (33%), Positives = 76/135 (56%)
Frame = -2
Query: 550 NQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 371
N M D RHG+Y+ ++RG + K+V+ I ++ K + FV+W P K + P
Sbjct: 299 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIP 358
Query: 370 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
PT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 359 PT--------GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 410
Query: 190 EAREDLAALEKDYEE 146
EA ++ L +Y++
Sbjct: 411 EAESNMNDLVSEYQQ 425
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -1
Query: 731 CXXXXDGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 558
C G LN DL + N PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 239 CSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 296
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 97.5 bits (232), Expect = 1e-20
Identities = 45/135 (33%), Positives = 75/135 (55%)
Frame = -2
Query: 550 NQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 371
N M D RHG+Y+ ++RG + K+V+ I I+ K + FV+W P K + P
Sbjct: 299 NMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIP 358
Query: 370 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
P ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 359 PK--------GLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 410
Query: 190 EAREDLAALEKDYEE 146
EA ++ L +Y++
Sbjct: 411 EAESNMNDLVAEYQQ 425
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -1
Query: 731 CXXXXDGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 558
C G LN DL + N PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 239 CSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 296
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 97.1 bits (231), Expect = 1e-20
Identities = 44/135 (32%), Positives = 76/135 (56%)
Frame = -2
Query: 550 NQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 371
N M D RHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 370 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
PT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 358 PT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 190 EAREDLAALEKDYEE 146
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVSEYQQ 424
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -1
Query: 731 CXXXXDGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 558
C G LN DL + N PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWD 295
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 97.1 bits (231), Expect = 1e-20
Identities = 44/135 (32%), Positives = 76/135 (56%)
Frame = -2
Query: 550 NQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 371
N M D RHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 370 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
PT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 358 PT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 190 EAREDLAALEKDYEE 146
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVSEYQQ 424
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -1
Query: 731 CXXXXDGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 558
C G LN DL + N PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWD 295
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 97.1 bits (231), Expect = 1e-20
Identities = 44/135 (32%), Positives = 76/135 (56%)
Frame = -2
Query: 550 NQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 371
N M D RHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 370 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
PT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 358 PT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 190 EAREDLAALEKDYEE 146
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVSEYQQ 424
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -1
Query: 731 CXXXXDGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 558
C G LN DL + N PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD 295
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 97.1 bits (231), Expect = 1e-20
Identities = 44/135 (32%), Positives = 76/135 (56%)
Frame = -2
Query: 550 NQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 371
N M D RHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + P
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357
Query: 370 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
PT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 358 PT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 190 EAREDLAALEKDYEE 146
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVSEYQQ 424
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -1
Query: 731 CXXXXDGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 558
C G LN DL + N PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWD 295
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 94.7 bits (225), Expect = 7e-20
Identities = 44/135 (32%), Positives = 76/135 (56%)
Frame = -2
Query: 550 NQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 371
N M D RHG+Y+ ++RG + K+V+ + I+ K + FV+W P K +
Sbjct: 298 NMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVC--- 354
Query: 370 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
+ P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 355 -DIAPKG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 190 EAREDLAALEKDYEE 146
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVAEYQQ 424
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -1
Query: 731 CXXXXDGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 558
C G LN DL + N PR+HF +V +AP+ S + LSV E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWD 295
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 94.7 bits (225), Expect = 7e-20
Identities = 43/135 (31%), Positives = 75/135 (55%)
Frame = -2
Query: 550 NQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 371
N M D RHG+Y+ ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC--- 354
Query: 370 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
+ P G + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 355 -DIAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 190 EAREDLAALEKDYEE 146
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVSEYQQ 424
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = -1
Query: 731 CXXXXDGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 558
C G LN DL + N PR+HF +V +AP+ S + L+V E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD 295
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 94.3 bits (224), Expect = 9e-20
Identities = 43/135 (31%), Positives = 76/135 (56%)
Frame = -2
Query: 550 NQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 371
N M D RHG+Y+ ++RG + K+V+ + ++ K + FV+W P K +
Sbjct: 298 NMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVC--- 354
Query: 370 PTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 191
+ P G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 355 -DIAPTG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 190 EAREDLAALEKDYEE 146
EA ++ L +Y++
Sbjct: 410 EAESNMNDLVAEYQQ 424
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -1
Query: 731 CXXXXDGALNXDLTEFQXNXCLTPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFE 558
C G LN DL + N PR+HF +V +AP+ S + LSV E+T ++
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWD 295
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 53.6 bits (123), Expect = 2e-07
Identities = 37/165 (22%), Positives = 82/165 (49%), Gaps = 4/165 (2%)
Frame = -2
Query: 631 RQSSLPRRPTMNSFPSPRSQTHASSPPNQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAI 452
RQ+++ R+ T+ QT + ++ KY++ + +G+V P V+ ++
Sbjct: 280 RQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESL 339
Query: 451 ATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD 272
I+ ++ + F+DW P +V ++ + P V ++ + ML++ T+I ++R
Sbjct: 340 QRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGL-----MLASHTSIRHLFSRCL 394
Query: 271 HKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKDYE 149
++D + K+AF+ Y M + EF E+R+ + +L +Y+
Sbjct: 395 SQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/165 (21%), Positives = 82/165 (49%), Gaps = 4/165 (2%)
Frame = -2
Query: 631 RQSSLPRRPTMNSFPSPRSQTHASSPPNQMVKCDSRHGKYMACCMLYRGDVVPKDVNAAI 452
RQ+++ R+ T+ QT + ++ KY++ + +G+V P V+ ++
Sbjct: 280 RQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESL 339
Query: 451 ATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD 272
I+ ++ + F++W P +V ++ + P V ++ + ML++ T+I +++
Sbjct: 340 QRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGL-----MLASHTSIRHLFSKCL 394
Query: 271 HKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAALEKDYE 149
++D + K+AF+ Y M + EF E+R+ + +L +Y+
Sbjct: 395 SQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESLVDEYK 439
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 279 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 172
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 455 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHL 547
GRV I Y D + + H H L TG+ HH+
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHV 90
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -2
Query: 718 STAL*XGTSPSSRXTXALPPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPP 551
STA GT+PS + PP +++ + +S P T S P P T+++SPP
Sbjct: 2 STAPSPGTTPSP--SPPSPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPP 55
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 691 PSSRXTXALPPVSTSHWSRTRQSSLPRRPTMNSF-PSPRSQTHASSPP 551
P++ T PP ++S T SS P P+ NS P P S S PP
Sbjct: 19 PTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPP 66
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 374 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 478
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = -2
Query: 694 SPSSRXTXALPPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPN 548
SPS T +LPP + T SLP PT P P H+SSP N
Sbjct: 125 SPSPPPTPSLPPPAPKKSPST--PSLPP-PTPKKSPPPPPSHHSSSPSN 170
>At3g22830.1 68416.m02877 heat shock transcription factor family
protein contains Pfam profile: PF00447 HSF-type
DNA-binding domain
Length = 406
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 664 PPVSTSH-WSRTRQSSLPRRPTMNSFPSPRSQTHASSPPNQMVK 536
PP S+S+ +S + + PT S+P P H S PP + K
Sbjct: 22 PPSSSSYLYSSSMAEAAINDPTTLSYPQPLEGLHESGPPPFLTK 65
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 151 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 267
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -2
Query: 490 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 347
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 416 DELDSTLGFDGSDGRVHILGYDVTTVQ 496
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +1
Query: 64 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 225
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 226 TSA 234
+S+
Sbjct: 361 SSS 363
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 258 SCTPSVLSCTGTSVRVWRRESSPK 187
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,966,894
Number of Sequences: 28952
Number of extensions: 376826
Number of successful extensions: 1448
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1438
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1931371200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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