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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_M03
         (790 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0)                207   9e-54
SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43)           48   7e-06
SB_31292| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0.0015)            39   0.004
SB_25386| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_22029| Best HMM Match : Copine (HMM E-Value=3.6e-24)                31   1.4  
SB_39367| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)                 29   3.2  
SB_43115| Best HMM Match : SapB_1 (HMM E-Value=3.9)                    29   4.3  
SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14)                    29   4.3  
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)                   28   7.5  
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)                 28   9.9  
SB_48736| Best HMM Match : RVT_1 (HMM E-Value=1.4e-11)                 28   9.9  
SB_45778| Best HMM Match : Exo_endo_phos (HMM E-Value=1e-10)           28   9.9  
SB_29742| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05)               28   9.9  
SB_21418| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.9  
SB_10446| Best HMM Match : Exo_endo_phos (HMM E-Value=6.6e-20)         28   9.9  
SB_8311| Best HMM Match : RVT_1 (HMM E-Value=3.9e-29)                  28   9.9  
SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.9  
SB_50149| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.9  
SB_45671| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.9  
SB_36722| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.9  
SB_26322| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.9  

>SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0)
          Length = 322

 Score =  207 bits (505), Expect = 9e-54
 Identities = 93/133 (69%), Positives = 112/133 (84%)
 Frame = -2

Query: 720 FQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 541
           F  K  SVK+++RG VAGD  NNPPK    FTAQVIV+NHPG+I  GY+PVLDCHTAHIA
Sbjct: 169 FNVKNVSVKDIKRGNVAGDFKNNPPKPCKSFTAQVIVMNHPGEIHAGYSPVLDCHTAHIA 228

Query: 540 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 361
           CKF ++ EK+DRR+GK  E NPK IK+GDAA+V ++PSKP+CVE+F EFPPLGRFAVRDM
Sbjct: 229 CKFDKLLEKIDRRSGKKLEDNPKMIKTGDAAMVEMIPSKPMCVETFTEFPPLGRFAVRDM 288

Query: 360 RQTVAVGVIKAVN 322
           +QTVAVGVIK+V+
Sbjct: 289 KQTVAVGVIKSVD 301


>SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43)
          Length = 547

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = -2

Query: 513 VDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRD 364
           +D++TGK  +  P+ IK    AI  L     +C+E F +F  +GRF +RD
Sbjct: 496 IDKKTGKKGQTRPRFIKQDQIAIARLETQGVICIEKFSDFQQMGRFTLRD 545


>SB_31292| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0.0015)
          Length = 80

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = -2

Query: 450 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 334
           A V L  S+P+CVE ++++  LGRF +R    T+A GVI
Sbjct: 40  AEVELQTSRPVCVELYKDYKDLGRFMLRYGGNTIAAGVI 78


>SB_25386| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 695

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/43 (37%), Positives = 28/43 (65%)
 Frame = -2

Query: 549 HIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKP 421
           HIA K  E+K   D ++ K+ ++ PK++ SGD    ++VP++P
Sbjct: 74  HIAKKL-EVK---DSQSSKNNDLYPKTVPSGDIGTDSVVPNQP 112


>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3367

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +2

Query: 461  DLMDF--GLTSVDLPVRRSTFSL-ISANLQAMWAVWQSK 568
            DL +F  G+T++ LP   ST  +    NLQ  W +WQSK
Sbjct: 2456 DLGNFIKGITTIPLPSSSSTPIIDFEVNLQGEWILWQSK 2494


>SB_22029| Best HMM Match : Copine (HMM E-Value=3.6e-24)
          Length = 726

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -2

Query: 528 EIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 388
           EI     R TG++TE+N  ++ SG+  I  +V +   C+   Q + P
Sbjct: 257 EINASHSRETGQTTEIN--ALHSGEPGIPGVVAAYQACIRQVQLYGP 301


>SB_39367| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
          Length = 903

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -2

Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355
           +++VP++P CV SF EF  +    +RD+ Q
Sbjct: 380 MSVVPAQPQCVASFPEFCAVSVSYIRDLSQ 409


>SB_43115| Best HMM Match : SapB_1 (HMM E-Value=3.9)
          Length = 495

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 323 LTALMTPTATVCLMSRTAKRPRGGNSWKDSTHR 421
           LT+L  PT    L  RT  +PR G  W+ + H+
Sbjct: 409 LTSLNEPTGEDLLFGRTLWKPRFGYLWQSAIHQ 441


>SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14)
          Length = 189

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/63 (26%), Positives = 29/63 (46%)
 Frame = -2

Query: 555 TAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 376
           T H+A  + E   ++ + T K   V+  S     + + +L         S +EFP LG+ 
Sbjct: 103 TVHLAALYIEHMTEIIQNTEKPPSVSDASSPGTTSDLDDLETDFTFSDFSLEEFPELGKL 162

Query: 375 AVR 367
           A+R
Sbjct: 163 ALR 165


>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
          Length = 1097

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 338 TPTATVCLMSRTAKRPRGGNSWKDSTHRGLEG 433
           TP+  VCL+SR  + PR    W     R + G
Sbjct: 282 TPSLYVCLLSRAHRDPRLSTGWSPYEKREVRG 313


>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
          Length = 904

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -2

Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355
           ++++P++P CV SF EF  +    +RD+ Q
Sbjct: 381 MSVMPAQPQCVASFPEFCAVSVSYIRDLLQ 410


>SB_48736| Best HMM Match : RVT_1 (HMM E-Value=1.4e-11)
          Length = 1175

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355
           +++ P++P CV SF EF  +    +RD+ Q
Sbjct: 385 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 414


>SB_45778| Best HMM Match : Exo_endo_phos (HMM E-Value=1e-10)
          Length = 549

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355
           +++ P++P CV SF EF  +    +RD+ Q
Sbjct: 389 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 418


>SB_29742| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05)
          Length = 1131

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 444  VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355
            +++ P++P CV SF EF  +    +RD+ Q
Sbjct: 1044 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 1073


>SB_21418| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 887

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355
           +++ P++P CV SF EF  +    +RD+ Q
Sbjct: 532 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 561


>SB_10446| Best HMM Match : Exo_endo_phos (HMM E-Value=6.6e-20)
          Length = 1285

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 444  VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355
            +++ P++P CV SF EF  +    +RD+ Q
Sbjct: 1111 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 1140


>SB_8311| Best HMM Match : RVT_1 (HMM E-Value=3.9e-29)
          Length = 605

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355
           +++ P++P CV SF EF  +    +RD+ Q
Sbjct: 184 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 213


>SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 988

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355
           +++ P++P CV SF EF  +    +RD+ Q
Sbjct: 3   MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 32


>SB_50149| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 656

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = -2

Query: 588 SNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLV-PSKP 421
           +N   P+L+  T  +A        K D  T  + +VN KS   G  +I+    P+ P
Sbjct: 586 ANALNPLLEHRTEKVALSKPMSNGKEDLNTETTADVNKKSCADGSDSIIGTTDPNSP 642


>SB_45671| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 270

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355
           +++ P++P CV SF EF  +    +RD+ Q
Sbjct: 87  MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 116


>SB_36722| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 148

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355
           +++ P++P CV SF EF  +    +RD+ Q
Sbjct: 3   MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 32


>SB_26322| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 229

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355
           +++ P++P CV SF EF  +    +RD+ Q
Sbjct: 3   MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 32


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,388,534
Number of Sequences: 59808
Number of extensions: 446442
Number of successful extensions: 1211
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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