BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_M03 (790 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0) 207 9e-54 SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) 48 7e-06 SB_31292| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0.0015) 39 0.004 SB_25386| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1 SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1 SB_22029| Best HMM Match : Copine (HMM E-Value=3.6e-24) 31 1.4 SB_39367| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 29 3.2 SB_43115| Best HMM Match : SapB_1 (HMM E-Value=3.9) 29 4.3 SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14) 29 4.3 SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 28 7.5 SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 28 9.9 SB_48736| Best HMM Match : RVT_1 (HMM E-Value=1.4e-11) 28 9.9 SB_45778| Best HMM Match : Exo_endo_phos (HMM E-Value=1e-10) 28 9.9 SB_29742| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) 28 9.9 SB_21418| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9 SB_10446| Best HMM Match : Exo_endo_phos (HMM E-Value=6.6e-20) 28 9.9 SB_8311| Best HMM Match : RVT_1 (HMM E-Value=3.9e-29) 28 9.9 SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9 SB_50149| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9 SB_45671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9 SB_36722| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9 SB_26322| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9 >SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0) Length = 322 Score = 207 bits (505), Expect = 9e-54 Identities = 93/133 (69%), Positives = 112/133 (84%) Frame = -2 Query: 720 FQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 541 F K SVK+++RG VAGD NNPPK FTAQVIV+NHPG+I GY+PVLDCHTAHIA Sbjct: 169 FNVKNVSVKDIKRGNVAGDFKNNPPKPCKSFTAQVIVMNHPGEIHAGYSPVLDCHTAHIA 228 Query: 540 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 361 CKF ++ EK+DRR+GK E NPK IK+GDAA+V ++PSKP+CVE+F EFPPLGRFAVRDM Sbjct: 229 CKFDKLLEKIDRRSGKKLEDNPKMIKTGDAAMVEMIPSKPMCVETFTEFPPLGRFAVRDM 288 Query: 360 RQTVAVGVIKAVN 322 +QTVAVGVIK+V+ Sbjct: 289 KQTVAVGVIKSVD 301 >SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) Length = 547 Score = 48.4 bits (110), Expect = 7e-06 Identities = 19/50 (38%), Positives = 29/50 (58%) Frame = -2 Query: 513 VDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRD 364 +D++TGK + P+ IK AI L +C+E F +F +GRF +RD Sbjct: 496 IDKKTGKKGQTRPRFIKQDQIAIARLETQGVICIEKFSDFQQMGRFTLRD 545 >SB_31292| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0.0015) Length = 80 Score = 39.1 bits (87), Expect = 0.004 Identities = 18/39 (46%), Positives = 26/39 (66%) Frame = -2 Query: 450 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 334 A V L S+P+CVE ++++ LGRF +R T+A GVI Sbjct: 40 AEVELQTSRPVCVELYKDYKDLGRFMLRYGGNTIAAGVI 78 >SB_25386| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 695 Score = 31.1 bits (67), Expect = 1.1 Identities = 16/43 (37%), Positives = 28/43 (65%) Frame = -2 Query: 549 HIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKP 421 HIA K E+K D ++ K+ ++ PK++ SGD ++VP++P Sbjct: 74 HIAKKL-EVK---DSQSSKNNDLYPKTVPSGDIGTDSVVPNQP 112 >SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3367 Score = 31.1 bits (67), Expect = 1.1 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 3/39 (7%) Frame = +2 Query: 461 DLMDF--GLTSVDLPVRRSTFSL-ISANLQAMWAVWQSK 568 DL +F G+T++ LP ST + NLQ W +WQSK Sbjct: 2456 DLGNFIKGITTIPLPSSSSTPIIDFEVNLQGEWILWQSK 2494 >SB_22029| Best HMM Match : Copine (HMM E-Value=3.6e-24) Length = 726 Score = 30.7 bits (66), Expect = 1.4 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = -2 Query: 528 EIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPP 388 EI R TG++TE+N ++ SG+ I +V + C+ Q + P Sbjct: 257 EINASHSRETGQTTEIN--ALHSGEPGIPGVVAAYQACIRQVQLYGP 301 >SB_39367| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) Length = 903 Score = 29.5 bits (63), Expect = 3.2 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = -2 Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355 +++VP++P CV SF EF + +RD+ Q Sbjct: 380 MSVVPAQPQCVASFPEFCAVSVSYIRDLSQ 409 >SB_43115| Best HMM Match : SapB_1 (HMM E-Value=3.9) Length = 495 Score = 29.1 bits (62), Expect = 4.3 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +2 Query: 323 LTALMTPTATVCLMSRTAKRPRGGNSWKDSTHR 421 LT+L PT L RT +PR G W+ + H+ Sbjct: 409 LTSLNEPTGEDLLFGRTLWKPRFGYLWQSAIHQ 441 >SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14) Length = 189 Score = 29.1 bits (62), Expect = 4.3 Identities = 17/63 (26%), Positives = 29/63 (46%) Frame = -2 Query: 555 TAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 376 T H+A + E ++ + T K V+ S + + +L S +EFP LG+ Sbjct: 103 TVHLAALYIEHMTEIIQNTEKPPSVSDASSPGTTSDLDDLETDFTFSDFSLEEFPELGKL 162 Query: 375 AVR 367 A+R Sbjct: 163 ALR 165 >SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) Length = 1097 Score = 28.3 bits (60), Expect = 7.5 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +2 Query: 338 TPTATVCLMSRTAKRPRGGNSWKDSTHRGLEG 433 TP+ VCL+SR + PR W R + G Sbjct: 282 TPSLYVCLLSRAHRDPRLSTGWSPYEKREVRG 313 >SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) Length = 904 Score = 27.9 bits (59), Expect = 9.9 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = -2 Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355 ++++P++P CV SF EF + +RD+ Q Sbjct: 381 MSVMPAQPQCVASFPEFCAVSVSYIRDLLQ 410 >SB_48736| Best HMM Match : RVT_1 (HMM E-Value=1.4e-11) Length = 1175 Score = 27.9 bits (59), Expect = 9.9 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -2 Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355 +++ P++P CV SF EF + +RD+ Q Sbjct: 385 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 414 >SB_45778| Best HMM Match : Exo_endo_phos (HMM E-Value=1e-10) Length = 549 Score = 27.9 bits (59), Expect = 9.9 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -2 Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355 +++ P++P CV SF EF + +RD+ Q Sbjct: 389 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 418 >SB_29742| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) Length = 1131 Score = 27.9 bits (59), Expect = 9.9 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -2 Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355 +++ P++P CV SF EF + +RD+ Q Sbjct: 1044 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 1073 >SB_21418| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 887 Score = 27.9 bits (59), Expect = 9.9 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -2 Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355 +++ P++P CV SF EF + +RD+ Q Sbjct: 532 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 561 >SB_10446| Best HMM Match : Exo_endo_phos (HMM E-Value=6.6e-20) Length = 1285 Score = 27.9 bits (59), Expect = 9.9 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -2 Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355 +++ P++P CV SF EF + +RD+ Q Sbjct: 1111 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 1140 >SB_8311| Best HMM Match : RVT_1 (HMM E-Value=3.9e-29) Length = 605 Score = 27.9 bits (59), Expect = 9.9 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -2 Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355 +++ P++P CV SF EF + +RD+ Q Sbjct: 184 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 213 >SB_55599| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 988 Score = 27.9 bits (59), Expect = 9.9 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -2 Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355 +++ P++P CV SF EF + +RD+ Q Sbjct: 3 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 32 >SB_50149| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 656 Score = 27.9 bits (59), Expect = 9.9 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Frame = -2 Query: 588 SNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLV-PSKP 421 +N P+L+ T +A K D T + +VN KS G +I+ P+ P Sbjct: 586 ANALNPLLEHRTEKVALSKPMSNGKEDLNTETTADVNKKSCADGSDSIIGTTDPNSP 642 >SB_45671| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 270 Score = 27.9 bits (59), Expect = 9.9 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -2 Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355 +++ P++P CV SF EF + +RD+ Q Sbjct: 87 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 116 >SB_36722| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 148 Score = 27.9 bits (59), Expect = 9.9 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -2 Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355 +++ P++P CV SF EF + +RD+ Q Sbjct: 3 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 32 >SB_26322| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 229 Score = 27.9 bits (59), Expect = 9.9 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -2 Query: 444 VNLVPSKPLCVESFQEFPPLGRFAVRDMRQ 355 +++ P++P CV SF EF + +RD+ Q Sbjct: 3 MSVTPAQPQCVASFPEFSAVSVSYIRDILQ 32 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,388,534 Number of Sequences: 59808 Number of extensions: 446442 Number of successful extensions: 1211 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 1113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1211 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2167838629 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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