BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_M03 (790 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 204 4e-53 U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 204 4e-53 U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 204 4e-53 Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 70 2e-12 Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 46 4e-05 Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 46 4e-05 Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical pr... 29 3.8 Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical pr... 29 3.8 U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 6.6 U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 6.6 AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 6.6 >U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor protein 4, isoformd protein. Length = 429 Score = 204 bits (499), Expect = 4e-53 Identities = 96/132 (72%), Positives = 108/132 (81%) Frame = -2 Query: 720 FQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 541 F K SVK++RRG V DS +P K A F AQVI++NHPGQISNGYTPVLDCHTAHIA Sbjct: 276 FNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIA 335 Query: 540 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 361 CKF E+KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDM Sbjct: 336 CKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDM 395 Query: 360 RQTVAVGVIKAV 325 RQTVAVGVIK+V Sbjct: 396 RQTVAVGVIKSV 407 >U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor protein 4, isoforma protein. Length = 463 Score = 204 bits (499), Expect = 4e-53 Identities = 96/132 (72%), Positives = 108/132 (81%) Frame = -2 Query: 720 FQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 541 F K SVK++RRG V DS +P K A F AQVI++NHPGQISNGYTPVLDCHTAHIA Sbjct: 310 FNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIA 369 Query: 540 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 361 CKF E+KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDM Sbjct: 370 CKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDM 429 Query: 360 RQTVAVGVIKAV 325 RQTVAVGVIK+V Sbjct: 430 RQTVAVGVIKSV 441 >U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor protein 3 protein. Length = 463 Score = 204 bits (499), Expect = 4e-53 Identities = 96/132 (72%), Positives = 108/132 (81%) Frame = -2 Query: 720 FQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 541 F K SVK++RRG V DS +P K A F AQVI++NHPGQISNGYTPVLDCHTAHIA Sbjct: 310 FNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIA 369 Query: 540 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 361 CKF E+KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDM Sbjct: 370 CKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDM 429 Query: 360 RQTVAVGVIKAV 325 RQTVAVGVIK+V Sbjct: 430 RQTVAVGVIKSV 441 >Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical protein H19N07.1 protein. Length = 532 Score = 70.1 bits (164), Expect = 2e-12 Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 1/134 (0%) Frame = -2 Query: 723 RFQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI 544 +F+ K EL+ G++ S ++ K F A+V+VL H I++GY+ VL +A Sbjct: 401 KFKLKGIEENELQGGFIIC-SPDSLAKTGRVFDAEVLVLEHRSIIASGYSCVLHIQSAVE 459 Query: 543 ACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRD 364 + +D++TG+ K +K + I+ L +P +E F+E+P LGRF +RD Sbjct: 460 EVTVKGVIATIDKKTGEKKRA--KFVKQDEKCIMRLESPEPFVLEPFKEYPYLGRFTLRD 517 Query: 363 MRQTVAVG-VIKAV 325 +T+A+G V+K V Sbjct: 518 EGKTIAIGKVLKVV 531 >Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical protein K07A12.4b protein. Length = 592 Score = 45.6 bits (103), Expect = 4e-05 Identities = 23/102 (22%), Positives = 45/102 (44%) Frame = -2 Query: 630 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDA 451 F +++ I G L H+ + C F + +++ G+ + P+ I G + Sbjct: 487 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 546 Query: 450 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 325 A+V + + +E+F LGR R T+A G+++ V Sbjct: 547 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 588 >Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical protein K07A12.4a protein. Length = 610 Score = 45.6 bits (103), Expect = 4e-05 Identities = 23/102 (22%), Positives = 45/102 (44%) Frame = -2 Query: 630 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDA 451 F +++ I G L H+ + C F + +++ G+ + P+ I G + Sbjct: 505 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 564 Query: 450 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 325 A+V + + +E+F LGR R T+A G+++ V Sbjct: 565 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 606 >Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical protein F57B1.9a protein. Length = 357 Score = 29.1 bits (62), Expect = 3.8 Identities = 14/52 (26%), Positives = 27/52 (51%) Frame = +2 Query: 209 MKYRSCMKNCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLM 364 M Y +C ++N Y L ++A+V LPPP ++ + ++ A C++ Sbjct: 188 MMYNNCRYRYSLNVLHY--ELYCQTSAVVNLPPPKAISIMEIVIQFAIPCII 237 >Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical protein T23G5.3 protein. Length = 262 Score = 29.1 bits (62), Expect = 3.8 Identities = 20/51 (39%), Positives = 25/51 (49%) Frame = +2 Query: 263 LPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNSWKDST 415 +P+V + L PPP L +LM P TV + R K P G NS K T Sbjct: 129 VPIVPRNLLLSKPPPPPPPPLPSLMQPKDTVQIPMR--KPPTGRNSKKIKT 177 >U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like protein protein 10,isoform b protein. Length = 564 Score = 28.3 bits (60), Expect = 6.6 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -2 Query: 567 LDCHTAHIACKFAEIKEKVDRRTGKSTE 484 L C + C+ + +K+K + T KSTE Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484 >U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like protein protein 10,isoform a protein. Length = 690 Score = 28.3 bits (60), Expect = 6.6 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -2 Query: 567 LDCHTAHIACKFAEIKEKVDRRTGKSTE 484 L C + C+ + +K+K + T KSTE Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484 >AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like protein protein. Length = 690 Score = 28.3 bits (60), Expect = 6.6 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -2 Query: 567 LDCHTAHIACKFAEIKEKVDRRTGKSTE 484 L C + C+ + +K+K + T KSTE Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,471,911 Number of Sequences: 27780 Number of extensions: 333912 Number of successful extensions: 927 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 901 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 926 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1914239236 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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