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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_M03
         (790 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation fact...   204   4e-53
U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation fact...   204   4e-53
U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation fact...   204   4e-53
Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical pr...    70   2e-12
Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical pr...    46   4e-05
Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical pr...    46   4e-05
Z78064-8|CAO82042.1|  357|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z19158-2|CAA79571.3|  262|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U41007-15|AAQ01538.1|  564|Caenorhabditis elegans Kinesin-like p...    28   6.6  
U41007-14|AAA82277.1|  690|Caenorhabditis elegans Kinesin-like p...    28   6.6  
AB023577-1|BAB82459.1|  690|Caenorhabditis elegans Kinesin like ...    28   6.6  

>U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation factor
           protein 4, isoformd protein.
          Length = 429

 Score =  204 bits (499), Expect = 4e-53
 Identities = 96/132 (72%), Positives = 108/132 (81%)
 Frame = -2

Query: 720 FQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 541
           F  K  SVK++RRG V  DS  +P K A  F AQVI++NHPGQISNGYTPVLDCHTAHIA
Sbjct: 276 FNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIA 335

Query: 540 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 361
           CKF E+KEKVDRRTGK  E  PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDM
Sbjct: 336 CKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDM 395

Query: 360 RQTVAVGVIKAV 325
           RQTVAVGVIK+V
Sbjct: 396 RQTVAVGVIKSV 407


>U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation factor
           protein 4, isoforma protein.
          Length = 463

 Score =  204 bits (499), Expect = 4e-53
 Identities = 96/132 (72%), Positives = 108/132 (81%)
 Frame = -2

Query: 720 FQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 541
           F  K  SVK++RRG V  DS  +P K A  F AQVI++NHPGQISNGYTPVLDCHTAHIA
Sbjct: 310 FNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIA 369

Query: 540 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 361
           CKF E+KEKVDRRTGK  E  PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDM
Sbjct: 370 CKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDM 429

Query: 360 RQTVAVGVIKAV 325
           RQTVAVGVIK+V
Sbjct: 430 RQTVAVGVIKSV 441


>U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation factor
           protein 3 protein.
          Length = 463

 Score =  204 bits (499), Expect = 4e-53
 Identities = 96/132 (72%), Positives = 108/132 (81%)
 Frame = -2

Query: 720 FQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 541
           F  K  SVK++RRG V  DS  +P K A  F AQVI++NHPGQISNGYTPVLDCHTAHIA
Sbjct: 310 FNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIA 369

Query: 540 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 361
           CKF E+KEKVDRRTGK  E  PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDM
Sbjct: 370 CKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDM 429

Query: 360 RQTVAVGVIKAV 325
           RQTVAVGVIK+V
Sbjct: 430 RQTVAVGVIKSV 441


>Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical
           protein H19N07.1 protein.
          Length = 532

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 1/134 (0%)
 Frame = -2

Query: 723 RFQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHI 544
           +F+ K     EL+ G++   S ++  K    F A+V+VL H   I++GY+ VL   +A  
Sbjct: 401 KFKLKGIEENELQGGFIIC-SPDSLAKTGRVFDAEVLVLEHRSIIASGYSCVLHIQSAVE 459

Query: 543 ACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRD 364
                 +   +D++TG+      K +K  +  I+ L   +P  +E F+E+P LGRF +RD
Sbjct: 460 EVTVKGVIATIDKKTGEKKRA--KFVKQDEKCIMRLESPEPFVLEPFKEYPYLGRFTLRD 517

Query: 363 MRQTVAVG-VIKAV 325
             +T+A+G V+K V
Sbjct: 518 EGKTIAIGKVLKVV 531


>Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical
           protein K07A12.4b protein.
          Length = 592

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 23/102 (22%), Positives = 45/102 (44%)
 Frame = -2

Query: 630 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDA 451
           F  +++       I  G    L  H+  + C F  +   +++  G+  +  P+ I  G +
Sbjct: 487 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 546

Query: 450 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 325
           A+V +     + +E+F     LGR   R    T+A G+++ V
Sbjct: 547 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 588


>Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical
           protein K07A12.4a protein.
          Length = 610

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 23/102 (22%), Positives = 45/102 (44%)
 Frame = -2

Query: 630 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDA 451
           F  +++       I  G    L  H+  + C F  +   +++  G+  +  P+ I  G +
Sbjct: 505 FEVRLVAFEIAMPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGAS 564

Query: 450 AIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 325
           A+V +     + +E+F     LGR   R    T+A G+++ V
Sbjct: 565 AVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 606


>Z78064-8|CAO82042.1|  357|Caenorhabditis elegans Hypothetical
           protein F57B1.9a protein.
          Length = 357

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +2

Query: 209 MKYRSCMKNCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLM 364
           M Y +C    ++N   Y   L   ++A+V LPPP ++ +  ++   A  C++
Sbjct: 188 MMYNNCRYRYSLNVLHY--ELYCQTSAVVNLPPPKAISIMEIVIQFAIPCII 237


>Z19158-2|CAA79571.3|  262|Caenorhabditis elegans Hypothetical
           protein T23G5.3 protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = +2

Query: 263 LPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNSWKDST 415
           +P+V  +  L   PPP    L +LM P  TV +  R  K P G NS K  T
Sbjct: 129 VPIVPRNLLLSKPPPPPPPPLPSLMQPKDTVQIPMR--KPPTGRNSKKIKT 177


>U41007-15|AAQ01538.1|  564|Caenorhabditis elegans Kinesin-like
           protein protein 10,isoform b protein.
          Length = 564

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 567 LDCHTAHIACKFAEIKEKVDRRTGKSTE 484
           L C    + C+ + +K+K +  T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484


>U41007-14|AAA82277.1|  690|Caenorhabditis elegans Kinesin-like
           protein protein 10,isoform a protein.
          Length = 690

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 567 LDCHTAHIACKFAEIKEKVDRRTGKSTE 484
           L C    + C+ + +K+K +  T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484


>AB023577-1|BAB82459.1|  690|Caenorhabditis elegans Kinesin like
           protein protein.
          Length = 690

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 567 LDCHTAHIACKFAEIKEKVDRRTGKSTE 484
           L C    + C+ + +K+K +  T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,471,911
Number of Sequences: 27780
Number of extensions: 333912
Number of successful extensions: 927
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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