BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_M03 (790 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 252 3e-69 X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 248 3e-68 EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 182 4e-48 AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 36 4e-04 X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 24 1.4 EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 24 1.4 AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 24 1.4 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.4 AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.4 AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 4.3 AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 4.3 L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 7.5 >AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha F2 protein. Length = 461 Score = 252 bits (617), Expect = 3e-69 Identities = 119/134 (88%), Positives = 123/134 (91%) Frame = -2 Query: 720 FQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 541 F K SVKELRRGYVAGDS NNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA Sbjct: 310 FNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 369 Query: 540 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 361 CKFA+IKEK DRR GK+TE NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGRFAVRDM Sbjct: 370 CKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRFAVRDM 429 Query: 360 RQTVAVGVIKAVNF 319 RQTVAVGVIKAV F Sbjct: 430 RQTVAVGVIKAVTF 443 Score = 29.5 bits (63), Expect = 0.037 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = -1 Query: 778 QSVEMPHXALQEAVPG 731 +SVEM H ALQEAVPG Sbjct: 290 KSVEMHHEALQEAVPG 305 >X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha protein. Length = 461 Score = 248 bits (608), Expect = 3e-68 Identities = 117/134 (87%), Positives = 123/134 (91%) Frame = -2 Query: 720 FQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 541 F K SVKELRRGYVAGDS N PP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA Sbjct: 310 FNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 369 Query: 540 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 361 CKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGRFAVRDM Sbjct: 370 CKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDM 429 Query: 360 RQTVAVGVIKAVNF 319 RQTVAVGVIK+V F Sbjct: 430 RQTVAVGVIKSVTF 443 Score = 25.8 bits (54), Expect = 0.46 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -1 Query: 778 QSVEMPHXALQEAVPG 731 +SVEM H AL EA+PG Sbjct: 290 KSVEMHHEALTEALPG 305 >EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-alpha protein. Length = 119 Score = 182 bits (442), Expect = 4e-48 Identities = 86/99 (86%), Positives = 89/99 (89%) Frame = -2 Query: 720 FQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 541 F K SVKELRRGYVAGDS N PP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA Sbjct: 21 FNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 80 Query: 540 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSK 424 CKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+K Sbjct: 81 CKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119 Score = 25.8 bits (54), Expect = 0.46 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -1 Query: 778 QSVEMPHXALQEAVPG 731 +SVEM H AL EA+PG Sbjct: 1 KSVEMHHEALTEALPG 16 >AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-alpha protein. Length = 274 Score = 35.9 bits (79), Expect = 4e-04 Identities = 17/22 (77%), Positives = 17/22 (77%) Frame = -2 Query: 720 FQRKERSVKELRRGYVAGDSXN 655 F K SVKELRRGYVAGDS N Sbjct: 253 FNVKNVSVKELRRGYVAGDSKN 274 Score = 29.5 bits (63), Expect = 0.037 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = -1 Query: 778 QSVEMPHXALQEAVPG 731 +SVEM H ALQEAVPG Sbjct: 233 KSVEMHHEALQEAVPG 248 >X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. Length = 162 Score = 24.2 bits (50), Expect = 1.4 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +2 Query: 212 KYRSCMKNCAVNSSSYFLPLVAFS 283 K+ C+KN A SSYF+ + F+ Sbjct: 94 KFYDCLKNSADTISSYFVGKMYFN 117 >EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 protein. Length = 167 Score = 24.2 bits (50), Expect = 1.4 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +2 Query: 212 KYRSCMKNCAVNSSSYFLPLVAFS 283 K+ C+KN A SSYF+ + F+ Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122 >AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 protein. Length = 167 Score = 24.2 bits (50), Expect = 1.4 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +2 Query: 212 KYRSCMKNCAVNSSSYFLPLVAFS 283 K+ C+KN A SSYF+ + F+ Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 23.4 bits (48), Expect = 2.4 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -2 Query: 702 SVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPG 595 S ++LR ++A + + PKG Q++VLN G Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318 >AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein 75 protein. Length = 900 Score = 23.4 bits (48), Expect = 2.4 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +2 Query: 173 CSPFFLRNTFR*MKYRSCMKN 235 C FF R+ + ++YR C KN Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107 >AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice variant B protein. Length = 810 Score = 22.6 bits (46), Expect = 4.3 Identities = 18/63 (28%), Positives = 24/63 (38%) Frame = +1 Query: 499 STTVNFFFDFCKFAGNVGSVAIQDWCVTV*DLTRMVKHNDLSCKICSTLRWVVXGVTSNI 678 ST+ N F K G G + CVT R HN + + C V + N+ Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136 Query: 679 TTT 687 T T Sbjct: 137 TVT 139 >AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. Length = 602 Score = 22.6 bits (46), Expect = 4.3 Identities = 18/63 (28%), Positives = 24/63 (38%) Frame = +1 Query: 499 STTVNFFFDFCKFAGNVGSVAIQDWCVTV*DLTRMVKHNDLSCKICSTLRWVVXGVTSNI 678 ST+ N F K G G + CVT R HN + + C V + N+ Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136 Query: 679 TTT 687 T T Sbjct: 137 TVT 139 >L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein protein. Length = 74 Score = 21.8 bits (44), Expect = 7.5 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = -1 Query: 583 RLHTSLGLPHCPHC 542 RLHT HC HC Sbjct: 30 RLHTGEKPYHCSHC 43 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 198,189 Number of Sequences: 438 Number of extensions: 4097 Number of successful extensions: 22 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 22 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 24882285 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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