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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_M03
         (790 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ...   196   1e-50
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ...   196   1e-50
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ...   196   1e-50
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ...   196   1e-50
At1g35550.1 68414.m04414 elongation factor Tu C-terminal domain-...   141   5e-34
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,...    70   2e-12
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E...    52   6e-07
At4g27900.2 68417.m04005 expressed protein                             32   0.50 
At4g27900.1 68417.m04004 expressed protein                             32   0.50 
At4g25650.1 68417.m03693 Rieske [2Fe-2S] domain-containing prote...    28   6.1  
At2g04740.1 68415.m00484 ankyrin repeat family protein contains ...    28   8.1  

>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
           identical to SWISS-PROT:P13905 elongation factor 1-alpha
           (EF-1-alpha) [Arabidopsis thaliana]
          Length = 449

 Score =  196 bits (478), Expect = 1e-50
 Identities = 87/133 (65%), Positives = 111/133 (83%)
 Frame = -2

Query: 720 FQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 541
           F  K  +VK+L+RGYVA +S ++P KGAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 357

Query: 540 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 361
            KF+EI  K+DRR+GK  E  PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDM
Sbjct: 358 VKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDM 417

Query: 360 RQTVAVGVIKAVN 322
           RQTVAVGVIK+V+
Sbjct: 418 RQTVAVGVIKSVD 430


>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  196 bits (478), Expect = 1e-50
 Identities = 87/133 (65%), Positives = 111/133 (83%)
 Frame = -2

Query: 720 FQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 541
           F  K  +VK+L+RGYVA +S ++P KGAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 357

Query: 540 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 361
            KF+EI  K+DRR+GK  E  PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDM
Sbjct: 358 VKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDM 417

Query: 360 RQTVAVGVIKAVN 322
           RQTVAVGVIK+V+
Sbjct: 418 RQTVAVGVIKSVD 430


>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  196 bits (478), Expect = 1e-50
 Identities = 87/133 (65%), Positives = 111/133 (83%)
 Frame = -2

Query: 720 FQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 541
           F  K  +VK+L+RGYVA +S ++P KGAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 357

Query: 540 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 361
            KF+EI  K+DRR+GK  E  PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDM
Sbjct: 358 VKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDM 417

Query: 360 RQTVAVGVIKAVN 322
           RQTVAVGVIK+V+
Sbjct: 418 RQTVAVGVIKSVD 430


>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
           identical to GB:CAA34456 from [Arabidopsis thaliana]
           (Plant Mol. Biol. 14 (1), 107-110 (1990))
          Length = 449

 Score =  196 bits (478), Expect = 1e-50
 Identities = 87/133 (65%), Positives = 111/133 (83%)
 Frame = -2

Query: 720 FQRKERSVKELRRGYVAGDSXNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 541
           F  K  +VK+L+RGYVA +S ++P KGAA+FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 298 FNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 357

Query: 540 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 361
            KF+EI  K+DRR+GK  E  PK +K+GDA +V + P+KP+ VE+F E+PPLGRFAVRDM
Sbjct: 358 VKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDM 417

Query: 360 RQTVAVGVIKAVN 322
           RQTVAVGVIK+V+
Sbjct: 418 RQTVAVGVIKSVD 430


>At1g35550.1 68414.m04414 elongation factor Tu C-terminal
           domain-containing protein similar to SP|P13905
           Elongation factor 1-alpha (EF-1-alpha) {Arabidopsis
           thaliana}; contains Pfam profile PF03143: Elongation
           factor Tu C-terminal domain
          Length = 104

 Score =  141 bits (341), Expect = 5e-34
 Identities = 61/95 (64%), Positives = 77/95 (81%)
 Frame = -2

Query: 609 LNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVP 430
           +NH GQI NGYTPVLDCHT+HIA KF+EI  K+D RTG   E  PK +K+ +AAI+N+ P
Sbjct: 1   MNHLGQIKNGYTPVLDCHTSHIAVKFSEILTKIDWRTGHEIEKEPKFLKNSEAAIINMTP 60

Query: 429 SKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 325
           +KP+ VE++  +PPLGRFA+RDMRQTV VGVIK+V
Sbjct: 61  TKPMVVEAYSAYPPLGRFAIRDMRQTVGVGVIKSV 95


>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
           putative similar to EF-1-alpha-related GTP-binding
           protein gi|1009232|gb|AAA79032
          Length = 532

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
 Frame = -2

Query: 696 KELRRGYVAGDSXNNPPKGAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIACKFAEI 523
           +++  G+V   S  NP     +F AQ+ +L        + GY  +L  H     C+  E+
Sbjct: 401 EDILSGFVLS-SIVNPVPAVTEFVAQLQILELLDNAIFTAGYKAILHIHAVVEECEIIEL 459

Query: 522 KEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAV 343
           K ++D +T K  +     +K+G A +  +  +  +C+E F +FP LGRF +R   +T+AV
Sbjct: 460 KSQIDLKTRKPMKKKVLFVKNGAAVVCRIQVTNSICIEKFSDFPQLGRFTLRTEGKTIAV 519

Query: 342 GVI 334
           G +
Sbjct: 520 GKV 522


>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
           EF-1-alpha, putative contains similarity to
           SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
           [Aeropyrum pernix]
          Length = 667

 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 30/109 (27%), Positives = 52/109 (47%)
 Frame = -2

Query: 651 PPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPK 472
           P   A      V+VL     I  G       H A  A    ++   +D +TG+ T+ +P+
Sbjct: 555 PVSVATHLELMVLVLEGATPILLGSQLEFHVHHAKEAATVVKLVAMLDPKTGQPTKKSPR 614

Query: 471 SIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 325
            + +  +A++ +    P+CVE+F E   LGR  +R   +TVA+G +  +
Sbjct: 615 CLTAKQSAMLEVSLQNPVCVETFSESRALGRVFLRSSGRTVAMGKVTRI 663


>At4g27900.2 68417.m04005 expressed protein
          Length = 261

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -2

Query: 477 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 385
           PKS+ SG+ + +++V  K   ++ F +FPP+
Sbjct: 144 PKSVSSGNLSSMDMVEHKDAVIQGFPDFPPV 174


>At4g27900.1 68417.m04004 expressed protein
          Length = 261

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -2

Query: 477 PKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 385
           PKS+ SG+ + +++V  K   ++ F +FPP+
Sbjct: 144 PKSVSSGNLSSMDMVEHKDAVIQGFPDFPPV 174


>At4g25650.1 68417.m03693 Rieske [2Fe-2S] domain-containing protein
           similar to cell death suppressor protein lls1 from Zea
           mays [gi:1935909], Rieske iron-sulfur protein Tic55 from
           Pisum sativum [gi:2764524]; contains Pfam PF00355 Rieske
           [2Fe-2S] domain
          Length = 536

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 537 KFAEIKEKVDRRTGKSTEVNPKSI 466
           +F + KEK+DR  GK  E+N K +
Sbjct: 258 RFPKPKEKIDREGGKPLEINVKKL 281


>At2g04740.1 68415.m00484 ankyrin repeat family protein contains
           ankyrin repeats, Pfam:PF00023
          Length = 578

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +2

Query: 170 VCSPFFLRNTFR*MKYRS-CMKNCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPT 346
           +C    L + +  +K R  C+   A N  + F+    F A L+TLPPP+         P+
Sbjct: 453 LCQWLVLSDMYGVLKIREYCLDLVACNFEA-FVETHEFRAMLLTLPPPSGDSSLRTTVPS 511

Query: 347 ATVCLMS 367
           A   +M+
Sbjct: 512 APGAMMT 518


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,535,927
Number of Sequences: 28952
Number of extensions: 307975
Number of successful extensions: 848
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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