BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_M02 (814 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 31 0.19 SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 31 0.19 SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 31 0.19 SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 30 0.45 SPBC11G11.01 |fis1||mitochondrial fission protein Fis1 |Schizosa... 29 0.59 SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 29 1.0 SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 28 1.8 SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 28 1.8 SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 26 5.5 SPAC644.11c |||pyruvate dehydrogenase |Schizosaccharomyces pombe... 26 7.3 SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 26 7.3 SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces ... 26 7.3 SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 26 7.3 SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces ... 25 9.7 SPCC757.02c |||epimarase |Schizosaccharomyces pombe|chr 3|||Manual 25 9.7 SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 25 9.7 >SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosaccharomyces pombe|chr 2|||Manual Length = 476 Score = 31.1 bits (67), Expect = 0.19 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = -3 Query: 416 LSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321 L ++P+NVE LV RG + SG KAI F+ Sbjct: 170 LRLNPKNVEALVLRGKVMYYSGENAKAITHFQ 201 Score = 25.4 bits (53), Expect = 9.7 Identities = 14/47 (29%), Positives = 20/47 (42%) Frame = -1 Query: 331 KILRPXLKLNPNHANARKYLGETLVALGRSYEDENQITEAQKAYEDC 191 KI L+LNP + A G+ + G + + EA K DC Sbjct: 164 KIAHDVLRLNPKNVEALVLRGKVMYYSGENAKAITHFQEALKLDPDC 210 >SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 317 Score = 31.1 bits (67), Expect = 0.19 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = -3 Query: 479 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIED 327 EG A + +A KA+ IDP + R A Y G F+ A+ED Sbjct: 89 EGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVED 139 >SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual Length = 665 Score = 31.1 bits (67), Expect = 0.19 Identities = 14/52 (26%), Positives = 27/52 (51%) Frame = -3 Query: 476 GIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321 G+ + K GR+ +A +A I+P N + G +Y +KKA++ ++ Sbjct: 506 GMVYLKTGRNDQADFHFQRAAEINPNNSVLITCIGMIYERCKDYKKALDFYD 557 Score = 29.1 bits (62), Expect = 0.79 Identities = 11/42 (26%), Positives = 24/42 (57%) Frame = -3 Query: 449 HSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDF 324 HS+A +C+N+A+ +DP +G ++ + ++K+ F Sbjct: 447 HSQALKCINRAIQLDPTFEYAYTLQGHEHSANEEYEKSKTSF 488 >SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccharomyces pombe|chr 2|||Manual Length = 1102 Score = 29.9 bits (64), Expect = 0.45 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 1/72 (1%) Frame = -1 Query: 277 YLGETLVALGRSYED-ENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEP 101 Y+ E LG YE NQI++A AY+ + P + + L L+ ++ Sbjct: 650 YISEVWYDLGTLYESCHNQISDALDAYQRAAELDPTNPHIKARLQLLRGPNNEQHKIVNA 709 Query: 100 AELLLPGLTGAK 65 +P + AK Sbjct: 710 PPSNVPNVQTAK 721 Score = 27.5 bits (58), Expect = 2.4 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = -1 Query: 253 LGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTAS 119 +G YE + A++AYE LA P H + L +L + ++S Sbjct: 518 IGHVYEQRKEYKLAKEAYERVLAETPNHAKVLQQLGWLCHQQSSS 562 >SPBC11G11.01 |fis1||mitochondrial fission protein Fis1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 160 Score = 29.5 bits (63), Expect = 0.59 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 Query: 473 IEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALY 363 + H+K ++ E+ + LN LS DP + E L + LY Sbjct: 86 LSHYKLKQYEESRRYLNMLLSKDPNSPEALKLKNRLY 122 >SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1400 Score = 28.7 bits (61), Expect = 1.0 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 4/96 (4%) Frame = -3 Query: 683 KGENYEAILEKSPGFNNPNC----IQFLSEHLGIANMHCTNFSYLRGRFASSEYADELRQ 516 K N+ + LE SPG N P+ L ++++ NF G SE L++ Sbjct: 39 KKVNFSSELENSPGGNRPSFGLPKRGILKTSTPLSSIKQPNFQSFEGN--ESEKETSLQE 96 Query: 515 AQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSI 408 Q+S F S E ++H + E + L+ L I Sbjct: 97 LQSS---FCSGIENLQHVEKSARIETYSKLSSFLKI 129 >SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces pombe|chr 1|||Manual Length = 949 Score = 27.9 bits (59), Expect = 1.8 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = -1 Query: 238 EDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELL 89 EDEN K EDC A + F + SL ++S T + L + +LL Sbjct: 684 EDENHRVHHVKVSEDCTATVSF---GKQSLHIVRSSVTLLETLDDYGKLL 730 >SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosaccharomyces pombe|chr 2|||Manual Length = 695 Score = 27.9 bits (59), Expect = 1.8 Identities = 19/77 (24%), Positives = 33/77 (42%) Frame = -1 Query: 256 ALGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELLLPGL 77 AL Y + + K Y++ LAI P +E +L+++ +PL + LL Sbjct: 81 ALAIVYRETKDYNNSLKCYQNALAISPNNESLWYDAAYLQAQLGLYQPLFDNWNRLLQLD 140 Query: 76 TGAKSYEMKETLKQLLN 26 + Y + TL L+ Sbjct: 141 SSNLEYRLCFTLSAFLS 157 >SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces pombe|chr 1|||Manual Length = 1323 Score = 26.2 bits (55), Expect = 5.5 Identities = 16/55 (29%), Positives = 24/55 (43%) Frame = -1 Query: 244 SYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELLLPG 80 +Y+DEN + + D I E S+ F KSKT+ + I A + G Sbjct: 889 NYDDENSLNRGGTSESDSEFIWDVDESNSGSIVFPKSKTSINLNNINSASASIMG 943 >SPAC644.11c |||pyruvate dehydrogenase |Schizosaccharomyces pombe|chr 1|||Manual Length = 425 Score = 25.8 bits (54), Expect = 7.3 Identities = 11/38 (28%), Positives = 19/38 (50%) Frame = +3 Query: 324 KIFYGLFECSTIGVQCSSSNKTLYISRIYAQSFIQALK 437 ++ YGLFE I + C S + +Y+ + + LK Sbjct: 262 RLAYGLFEAPEIQIICDPSLEMMYVESHLNHAVFEILK 299 >SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 642 Score = 25.8 bits (54), Expect = 7.3 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -1 Query: 202 YEDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAEL 92 +ED + E SLD LK+KT+ P++ EL Sbjct: 445 WEDARYFSKENRELLRSLDSLKAKTSKKDPIVRRNEL 481 >SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces pombe|chr 3|||Manual Length = 496 Score = 25.8 bits (54), Expect = 7.3 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -1 Query: 178 PFHEEAQNSLDFLKSKTTASKPLIEPAELLLPG 80 P+ E N+ D+L K +P P LL PG Sbjct: 212 PWDEAISNTGDYLLYKKQCERPSYHPWNLLSPG 244 >SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizosaccharomyces pombe|chr 2|||Manual Length = 598 Score = 25.8 bits (54), Expect = 7.3 Identities = 14/41 (34%), Positives = 18/41 (43%) Frame = -1 Query: 328 ILRPXLKLNPNHANARKYLGETLVALGRSYEDENQITEAQK 206 +L +K NP H A K+LG LG + EA K Sbjct: 316 LLEQSVKENPQHFEAWKWLGRIHTLLGNESRVVEALLEAVK 356 >SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces pombe|chr 1|||Manual Length = 580 Score = 25.4 bits (53), Expect = 9.7 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +2 Query: 182 DS*AIFISFLCFCYLVLVFI 241 D+ A F S+LCF +V+VFI Sbjct: 511 DAGAFFQSYLCFPVVVIVFI 530 >SPCC757.02c |||epimarase |Schizosaccharomyces pombe|chr 3|||Manual Length = 405 Score = 25.4 bits (53), Expect = 9.7 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = -3 Query: 686 MKGENYEAILEKSPGFNNPNCIQFLSEHLGIANMHCTNFS 567 M E Y AI+ + G N I+ LSE +HC + S Sbjct: 1 MAEEGYVAIVTGATGLNGAAIIKRLSEDDNCKTIHCISRS 40 >SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr 3|||Manual Length = 577 Score = 25.4 bits (53), Expect = 9.7 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = -3 Query: 461 KAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKA 336 K+G++S+A + + ++ RN G + G L G KKA Sbjct: 53 KSGQYSQAELDAKRMIHLNARNARGYLRLGKLLQLDGFDKKA 94 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,024,771 Number of Sequences: 5004 Number of extensions: 60563 Number of successful extensions: 198 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 187 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 198 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 396433620 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -