BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_M02 (814 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002 SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.022 SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 33 0.21 SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 33 0.28 SB_44236| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9 SB_38412| Best HMM Match : DUF733 (HMM E-Value=8.1) 30 1.9 SB_34109| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 30 1.9 SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6 SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 29 4.5 SB_39125| Best HMM Match : DUF164 (HMM E-Value=0.082) 29 4.5 SB_43872| Best HMM Match : DUF229 (HMM E-Value=0) 29 5.9 SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9 SB_23619| Best HMM Match : TPR_1 (HMM E-Value=5.6) 29 5.9 SB_18223| Best HMM Match : TPR_1 (HMM E-Value=0.11) 29 5.9 SB_27117| Best HMM Match : SAM_1 (HMM E-Value=6.3e-07) 29 5.9 SB_23059| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9 SB_12147| Best HMM Match : QRPTase_C (HMM E-Value=0) 29 5.9 SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8 SB_58596| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8 >SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1190 Score = 40.3 bits (90), Expect = 0.002 Identities = 18/48 (37%), Positives = 26/48 (54%) Frame = -3 Query: 467 HFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDF 324 H K G + + + NKAL ID N++ L RG N ++K+ EDF Sbjct: 1028 HLKLGNNFKCIKACNKALDIDKENIKALFRRGKALLNLKDYEKSKEDF 1075 >SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 308 Score = 36.7 bits (81), Expect = 0.022 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = -3 Query: 467 HFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321 H K G EA + N ALSID +V+ L R Y + +A+ DF+ Sbjct: 130 HLKLGFSQEAIKECNAALSIDENDVDALCDRAEAYILEEMYNEAVNDFQ 178 >SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) Length = 592 Score = 33.5 bits (73), Expect = 0.21 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = -3 Query: 536 YADELRQAQASKWAFRS-VAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYA 360 Y D+ Q + K +F + +AEG FK + +A + AL + P + LVAR Y Sbjct: 2 YEDDEEQEEGPKSSFSTYLAEGDVLFKQEEYQKALDSYSLALELKPTDPFCLVARSKCYL 61 Query: 359 NSGTFKKAIEDFE 321 G A D E Sbjct: 62 KLGKNDAAYRDAE 74 >SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) Length = 436 Score = 33.1 bits (72), Expect = 0.28 Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 5/126 (3%) Frame = -1 Query: 364 TPIVEHS-KRP*KILRPXLKLNPNHANARKYLGETLVALGRSYEDENQITEAQ----KAY 200 TP +E S K K+ + L N +++K T +L + E+E E Q K Y Sbjct: 8 TPAIEESRKNTHKLSKKLLSANSTTTHSKKISKAT--SLKKKQEEERAAKERQEKLLKLY 65 Query: 199 EDCLAIIPFHEEAQNSLDFLKSKTTASKPLIEPAELLLPGLTGAKSYEMKETLKQLLNLT 20 E + HEE ++ +LK K T LI+ + L + ++ ++ ++ +K+ L Sbjct: 66 ELWHQVK--HEEREDRHGYLKDKVTLQHALIQQQDELCK-VKQSRLHKQQQQIKKTQLLA 122 Query: 19 RKKKKK 2 R+++ K Sbjct: 123 RQERNK 128 >SB_44236| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 404 Score = 30.3 bits (65), Expect = 1.9 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = +3 Query: 354 TIGVQCSSSNKTLYISRIYAQSFIQALKCFRMSSSFKMFNAFC 482 T G+Q S KT++ + + F+ A C ++ F +N +C Sbjct: 103 TAGLQAKSFFKTVFNQHLKSNVFVTAFDCSNVAKLFVDYNVYC 145 >SB_38412| Best HMM Match : DUF733 (HMM E-Value=8.1) Length = 280 Score = 30.3 bits (65), Expect = 1.9 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -3 Query: 488 SVAEGIEHFKAGRHSEAFQCLNKALSI 408 +++ G EH GRH E F LNKAL + Sbjct: 247 TISTGAEHPSHGRHQEFFNELNKALDL 273 >SB_34109| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) Length = 503 Score = 30.3 bits (65), Expect = 1.9 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = -3 Query: 455 GRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321 G + +A C N+AL +P + L R A+ G KKA+E ++ Sbjct: 54 GNYKQALACYNQALKHNPDDPTILWERAAVCYQMGDVKKALEYYQ 98 >SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 522 Score = 29.9 bits (64), Expect = 2.6 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Frame = -3 Query: 626 CIQFLSEHLGIANMHCTNFSYLRGRFASSEYADELRQAQASK--WAFRSVAEGIEHFKAG 453 C Q S L + + N Y + Y E R + K W+F++ + EH KA Sbjct: 98 CSQMFSNPLALQDTRFLNLMY------TMHYNGEKRPFKCDKCWWSFKNPSGLREHIKAV 151 Query: 452 RHSEAFQC 429 +SE F+C Sbjct: 152 HNSEKFKC 159 >SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) Length = 1312 Score = 29.1 bits (62), Expect = 4.5 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = -1 Query: 166 EAQNSLDFLKSKTTASKPLIEPAELLLPGLTGAKSYEMKETLKQLLNLTRKKKKK 2 E Q L L S P++ ++ PGL G K Y+ + L + NLT + + + Sbjct: 989 ERQADLIALLETKNNSIPVVSDLDIQAPGLLGQKQYQEQLNLLEQRNLTLQARNE 1043 >SB_39125| Best HMM Match : DUF164 (HMM E-Value=0.082) Length = 363 Score = 29.1 bits (62), Expect = 4.5 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = -1 Query: 166 EAQNSLDFLKSKTTASKPLIEPAELLLPGLTGAKSYEMKETLKQLLNLTRKKKKK 2 E Q L L S P++ ++ PGL G K Y+ + L + NLT + + + Sbjct: 269 ERQADLIALLETKNNSIPVVSDLDIQAPGLLGQKQYQEQLNLLEQRNLTLQARNE 323 >SB_43872| Best HMM Match : DUF229 (HMM E-Value=0) Length = 806 Score = 28.7 bits (61), Expect = 5.9 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 354 TIGVQCSSSNKTLYISRIYAQSFIQALK 437 + GV S K+LYI R Y +I ALK Sbjct: 46 SFGVPSESKEKSLYIKRSYIDLYINALK 73 >SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 190 Score = 28.7 bits (61), Expect = 5.9 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = -3 Query: 479 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGAL 366 +G+E +AG A C NKA+ + P G R L Sbjct: 52 QGVEKAEAGDFVGALDCFNKAIDVAPLRASGYNNRAQL 89 >SB_23619| Best HMM Match : TPR_1 (HMM E-Value=5.6) Length = 71 Score = 28.7 bits (61), Expect = 5.9 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -1 Query: 229 NQITEAQKAYEDCLAIIPFHEEAQN 155 N++ EA AY+D L I PF EA N Sbjct: 3 NKLEEAVAAYDDALKIDPFFVEAYN 27 >SB_18223| Best HMM Match : TPR_1 (HMM E-Value=0.11) Length = 96 Score = 28.7 bits (61), Expect = 5.9 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = -3 Query: 479 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGAL 366 +G+E +AG A C NKA+ + P G R L Sbjct: 52 QGVEKAEAGDFVGALDCFNKAIDVAPLRASGYNNRAQL 89 >SB_27117| Best HMM Match : SAM_1 (HMM E-Value=6.3e-07) Length = 367 Score = 28.7 bits (61), Expect = 5.9 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = -3 Query: 515 AQASKWAFRSVAEGIEHFKAGRHSEAFQ 432 +Q +W VA + H K G+++EAF+ Sbjct: 296 SQMEEWTVNDVANHLVHIKLGKYAEAFK 323 >SB_23059| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 339 Score = 28.7 bits (61), Expect = 5.9 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = -3 Query: 422 KALSIDPRNVEGLVARGALYANSGTFKKAIEDF 324 +AL IDP +VE + G+++ +G +KA+ F Sbjct: 85 RALEIDPDHVEAIEMAGSVFLETGQPEKAVNCF 117 >SB_12147| Best HMM Match : QRPTase_C (HMM E-Value=0) Length = 306 Score = 28.7 bits (61), Expect = 5.9 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = -3 Query: 704 TKKTMDMKGENYEAILEKSPGFNNPNCIQFLSEHLGIANMHCTNFSY 564 T KT+ KG+ I+E S G N+ + Q+ H+ + ++ C Y Sbjct: 236 TAKTL--KGKCAGVIIEASGGINDSSIAQYFGPHVDVISLGCLTQGY 280 >SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 540 Score = 28.3 bits (60), Expect = 7.8 Identities = 13/49 (26%), Positives = 24/49 (48%) Frame = -3 Query: 467 HFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321 + K + A NKA+ +D + ++G R G FK +++D+E Sbjct: 231 YLKTEYYGLALADANKAIQLDRKYIKGYYRRATANMALGKFKLSLKDYE 279 >SB_58596| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 261 Score = 28.3 bits (60), Expect = 7.8 Identities = 11/40 (27%), Positives = 21/40 (52%) Frame = -3 Query: 563 LRGRFASSEYADELRQAQASKWAFRSVAEGIEHFKAGRHS 444 + GR S + +A+ W F + E I H+++G+H+ Sbjct: 92 IMGRSRPSIKLTDFLRAEIEYWRFIDIGESILHWRSGKHA 131 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,942,032 Number of Sequences: 59808 Number of extensions: 421615 Number of successful extensions: 999 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 944 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 998 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2263654701 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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