Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_M02
(814 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g42810.1 68415.m05300 serine/threonine protein phosphatase, p... 46 2e-05
At3g04240.1 68416.m00448 O-linked N-acetyl glucosamine transfera... 42 6e-04
At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containi... 40 0.003
At5g21990.1 68418.m02557 tetratricopeptide repeat (TPR)-containi... 36 0.024
At4g12400.1 68417.m01960 stress-inducible protein, putative simi... 36 0.032
At3g11540.2 68416.m01408 gibberellin signal transduction protein... 36 0.042
At3g11540.1 68416.m01407 gibberellin signal transduction protein... 36 0.042
At1g04190.1 68414.m00409 tetratricopeptide repeat (TPR)-containi... 33 0.17
At4g02100.1 68417.m00281 DNAJ heat shock N-terminal domain-conta... 33 0.30
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 32 0.39
At3g17970.1 68416.m02286 chloroplast outer membrane translocon s... 32 0.52
At1g12270.1 68414.m01419 stress-inducible protein, putative simi... 31 0.69
At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containi... 31 0.91
At5g08250.1 68418.m00969 cytochrome P450 family protein contains... 30 1.6
At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containi... 30 1.6
At5g12430.1 68418.m01461 DNAJ heat shock N-terminal domain-conta... 30 2.1
At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containi... 30 2.1
At4g31820.1 68417.m04522 phototropic-responsive NPH3 family prot... 29 2.8
At4g28600.1 68417.m04090 calmodulin-binding protein similar to p... 29 2.8
At2g32450.1 68415.m03964 calcium-binding EF hand family protein ... 29 2.8
At1g75160.1 68414.m08730 expressed protein contains Pfam profile... 29 2.8
At1g29630.1 68414.m03622 exonuclease, putative similar to Swiss-... 29 2.8
At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containi... 29 3.7
At5g56290.1 68418.m07026 peroxisomal targeting signal type 1 rec... 28 6.4
At3g53560.1 68416.m05914 chloroplast lumen common family protein 28 6.4
At3g09490.1 68416.m01128 chloroplast lumen common family protein... 28 6.4
At1g02330.1 68414.m00178 expressed protein contains similarity t... 28 6.4
At5g09420.1 68418.m01091 chloroplast outer membrane translocon s... 28 8.5
At3g60050.1 68416.m06706 pentatricopeptide (PPR) repeat-containi... 28 8.5
At2g06210.1 68415.m00684 phosphoprotein-related low similarity t... 28 8.5
>At2g42810.1 68415.m05300 serine/threonine protein phosphatase,
putative similar to SP|P53042 Serine/threonine protein
phosphatase 5 (EC 3.1.3.16) (PP5) (Protein phosphatase
T) (PPT) {Rattus norvegicus}; contains Pfam profiles
PF00149: Ser/Thr protein phosphatase, PF00515: TPR
Domain
Length = 484
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/71 (38%), Positives = 36/71 (50%)
Frame = -3
Query: 533 ADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANS 354
A EL A WA R+ A H K + A Q +KA+ +D R +G RGA Y
Sbjct: 39 AIELNSNNAVYWANRAFA----HTKLEEYGSAIQDASKAIEVDSRYSKGYYRRGAAYLAM 94
Query: 353 GTFKKAIEDFE 321
G FK A++DF+
Sbjct: 95 GKFKDALKDFQ 105
>At3g04240.1 68416.m00448 O-linked N-acetyl glucosamine transferase,
putative similar to O-GlcNAc transferase, Homo sapiens
[SP|O15294], Rattus norvegicus [SP|P56558]; contains
Pfam profile PF00515: TPR Domain; identical to cDNA
GI:18139886
Length = 977
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/75 (33%), Positives = 37/75 (49%)
Frame = -3
Query: 548 ASSEYADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGA 369
ASS + L F ++A I + + G +S+A C N+ L IDP + LV RG
Sbjct: 378 ASSLFKATLAVTTGLSAPFNNLA--IIYKQQGNYSDAISCYNEVLRIDPLAADALVNRGN 435
Query: 368 LYANSGTFKKAIEDF 324
Y G +AI+D+
Sbjct: 436 TYKEIGRVTEAIQDY 450
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 253 LGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSL 149
LG + +D ++ EA + Y CLA+ P H +A +L
Sbjct: 331 LGNALKDIGRVDEAVRCYNQCLALQPNHPQAMANL 365
Score = 31.5 bits (68), Expect = 0.69
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = -3
Query: 533 ADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANS 354
A ELR A W+ + A + + GR SEA QC +ALS++P V+ G L
Sbjct: 147 AIELRPNFADAWSNLASA----YMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQ 202
Query: 353 GTFKKA 336
G +A
Sbjct: 203 GLIHEA 208
>At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 593
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = -3
Query: 479 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIED 327
+G E FK+GR EA + L DPRN L R A + G F K+IED
Sbjct: 476 KGNELFKSGRFQEACAAYGEGLDHDPRNSVLLCNRAACRSKLGQFDKSIED 526
>At5g21990.1 68418.m02557 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 554
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 467 HFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIED 327
+ K +H E + ++ L D RNV+ L RG Y + G F+ A+ D
Sbjct: 156 YLKTNQHEECIKEGSEVLGYDARNVKALYRRGQAYRDLGLFEDAVSD 202
>At4g12400.1 68417.m01960 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 530
Score = 35.9 bits (79), Expect = 0.032
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = -3
Query: 539 EYADELRQAQASKW-AFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALY 363
E +E RQ + K A + EG +K A + KA+ +D ++ L R A+Y
Sbjct: 215 ELTEEERQKKERKEKALKEKGEGNVAYKKKDFGRAVEHYTKAMELDDEDISYLTNRAAVY 274
Query: 362 ANSGTFKKAIED 327
G +++ IED
Sbjct: 275 LEMGKYEECIED 286
>At3g11540.2 68416.m01408 gibberellin signal transduction protein
(SPINDLY) identical to spindly GB:AAC49446 (GI:1589778)
[Arabidopsis thaliana]; contains Pfam profile PF00515
TPR Domain
Length = 732
Score = 35.5 bits (78), Expect = 0.042
Identities = 22/85 (25%), Positives = 37/85 (43%)
Frame = -3
Query: 575 NFSYLRGRFASSEYADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRN 396
N R +FA + E + SK + +GI + + AF C ++A+ +DP N
Sbjct: 51 NILRARNKFADALALYEAMLEKDSKNVEAHIGKGICLQTQNKGNLAFDCFSEAIRLDPHN 110
Query: 395 VEGLVARGALYANSGTFKKAIEDFE 321
L G L+ G +A E ++
Sbjct: 111 ACALTHCGILHKEEGRLVEAAESYQ 135
>At3g11540.1 68416.m01407 gibberellin signal transduction protein
(SPINDLY) identical to spindly GB:AAC49446 (GI:1589778)
[Arabidopsis thaliana]; contains Pfam profile PF00515
TPR Domain
Length = 914
Score = 35.5 bits (78), Expect = 0.042
Identities = 22/85 (25%), Positives = 37/85 (43%)
Frame = -3
Query: 575 NFSYLRGRFASSEYADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRN 396
N R +FA + E + SK + +GI + + AF C ++A+ +DP N
Sbjct: 51 NILRARNKFADALALYEAMLEKDSKNVEAHIGKGICLQTQNKGNLAFDCFSEAIRLDPHN 110
Query: 395 VEGLVARGALYANSGTFKKAIEDFE 321
L G L+ G +A E ++
Sbjct: 111 ACALTHCGILHKEEGRLVEAAESYQ 135
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/36 (50%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 253 LGRSYEDENQITEAQKAYEDCLAIIPFHEEA-QNSL 149
LG Y D IT A AYE+CL I P A QN L
Sbjct: 403 LGVLYRDAGNITMAIDAYEECLKIDPDSRNAGQNRL 438
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 283 RKYLGETLVALGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSL 149
R E +G Y++ + A YE CLA+ P E A+N++
Sbjct: 216 RPMYAEAYCNMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNM 260
>At1g04190.1 68414.m00409 tetratricopeptide repeat (TPR)-containing
protein low similarity to protein antigen LmSTI1
[Leishmania major] GI:1698880; contains Pfam profile
PF00515 TPR Domain; EST gb|Z47802 and gb|Z48402 come
from this gene
Length = 328
Score = 33.5 bits (73), Expect = 0.17
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = -3
Query: 533 ADELRQAQASKWAFRSVAE-GIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYAN 357
A++ +A A +S+ E G E FKAG +A +A+ +DP N R A + +
Sbjct: 2 AEKAGKATNGGEAEKSLKEKGNEFFKAGNFLKAAALYTQAIKLDPSNATLYSNRAAAFLS 61
Query: 356 SGTFKKAIEDFET 318
KA+ D ET
Sbjct: 62 LVKLSKALADAET 74
>At4g02100.1 68417.m00281 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 546
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 458 AGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321
AGR +E+ NK L++DP ++ L R AL + F ++ D E
Sbjct: 290 AGRIAESIADCNKTLALDPSCLQALETRAALLESVRCFPDSLHDLE 335
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -3
Query: 491 RSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIED 327
R+ A G + +K+ R++EA + L +DP N R A + G ++++IED
Sbjct: 467 RARARGNDLYKSERYTEASSAYAEGLRLDPCNAILYCNRAACWFKLGMWERSIED 521
>At3g17970.1 68416.m02286 chloroplast outer membrane translocon
subunit, putative similar to Toc64 [Pisum sativum]
GI:7453538; contains Pfam profile PF00515 TPR Domain
Length = 589
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 467 HFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDF 324
+ + G +A + KA+++D +NV+ + RG G K AIEDF
Sbjct: 518 YLELGGFLQAEEDCTKAITLDKKNVKAYLRRGTAREMLGDCKGAIEDF 565
>At1g12270.1 68414.m01419 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 572
Score = 31.5 bits (68), Expect = 0.69
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = -3
Query: 539 EYADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYA 360
E +E + + + A + G +K A Q + A+ ID ++ L R A+Y
Sbjct: 230 EVTEEKEKKERKEKAKKEKELGNAAYKKKDFETAIQHYSTAIEIDDEDISYLTNRAAVYL 289
Query: 359 NSGTFKKAIED 327
G + + IED
Sbjct: 290 EMGKYNECIED 300
>At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 691
Score = 31.1 bits (67), Expect = 0.91
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -3
Query: 503 KWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIED 327
K R+ G E F +GR SEA L D N R A + G ++K++ED
Sbjct: 456 KMVVRARTRGNELFSSGRFSEACVAYGDGLKQDDSNSVLYCNRAACWYKLGLWEKSVED 514
>At5g08250.1 68418.m00969 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 488
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -3
Query: 437 FQCLNKALSIDPRNVEGLV-ARGALYANSGTFKKAIED 327
F LN ++ DPRNVE L+ R ++Y F++ ++D
Sbjct: 43 FSTLNCVVTCDPRNVEHLLKTRFSIYPKGSYFRETMQD 80
>At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 883
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 449 HSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIED 327
H +A +C+ + L +D R + RG ++ G +KAI++
Sbjct: 483 HCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQE 523
>At5g12430.1 68418.m01461 DNAJ heat shock N-terminal domain-containing
protein similarity to TETRATRICOPEPTIDE REPEAT PROTEIN 2
, human, SWISSPROT:TTC2_HUMAN; contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 1165
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = -3
Query: 491 RSVAEGIEHFKAGRHSEAFQCLNKALSID----PRNVEGLVARGALYANSGTFKKAIED 327
R A G E F++GRH+EA + AL+ + P R A Y G F AI D
Sbjct: 881 RLKAAGNEAFQSGRHTEAVEHYTAALACNVESRPFTAVCFCNRAAAYKALGQFSDAIAD 939
>At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 682
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 476 GIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIED 327
G E F +GR+SEA L +D N R A + G ++K+++D
Sbjct: 456 GNELFSSGRYSEASVAYGDGLKLDAFNSVLYCNRAACWFKLGMWEKSVDD 505
>At4g31820.1 68417.m04522 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 571
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -1
Query: 154 SLDFLKSKTTASKPLIEPAELLLPGLTGAKSYEMKETLKQLLNLT 20
S++ L S+ +++K L+E LLP + A SY L +LL ++
Sbjct: 257 SMESLTSEASSNKDLVETVVFLLPKVNRAMSYSSCSFLLKLLKVS 301
>At4g28600.1 68417.m04090 calmodulin-binding protein similar to
pollen-specific calmodulin-binding protein MPCBP
GI:10086260 from [Zea mays]
Length = 739
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -3
Query: 479 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSG 351
EG+ + + G+ EA + AL IDP +V L ++ + G
Sbjct: 632 EGVLYNRRGQLEEAMEAFTTALDIDPMHVPSLTSKAEILLEVG 674
>At2g32450.1 68415.m03964 calcium-binding EF hand family protein low
similarity to O-linked GlcNAc transferase [Homo sapiens]
GI:2266994; contains Pfam profiles PF00036: EF hand,
PF00515: TPR Domain
Length = 802
Score = 29.5 bits (63), Expect = 2.8
Identities = 31/114 (27%), Positives = 46/114 (40%)
Frame = -1
Query: 343 KRP*KILRPXLKLNPNHANARKYLGETLVALGRSYEDENQITEAQKAYEDCLAIIPFHEE 164
+R ++ + + L P H +A L LG Y D + A + Y LA+ P H
Sbjct: 390 ERAIEVFQRAIDLKPGHVDA-------LYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWR 442
Query: 163 AQNSLDFLKSKTTASKPLIEPAELLLPGLTGAKSYEMKETLKQLLNLTRKKKKK 2
AQ L+ S A + E L L E+ + + L L +KKK K
Sbjct: 443 AQ--LNKAVSLLGAGE-TEEAKRALKEALKMTNRVELHDAVSHLKQLQKKKKVK 493
>At1g75160.1 68414.m08730 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 395
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -1
Query: 631 PTAFNSSLNILALPTCTAQISHI*EEDSLHRNTQMNYAKHKQVNGHFVLWQKALNILKLE 452
PTA N+ ++ A+ Q S + + T + K G FVLWQK N+ LE
Sbjct: 134 PTALNAVKSMYAVGQVRMQGSEMVAGEDEGTGTPVRLGKGSFEVGGFVLWQKNPNLWFLE 193
Query: 451 DILKHF 434
++ F
Sbjct: 194 LVVSGF 199
>At1g29630.1 68414.m03622 exonuclease, putative similar to
Swiss-Prot:P53695 exonuclease I (EXO I)
[Schizosaccharomyces pombe]
Length = 317
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 488 SVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLV 381
++A +EH G S A++C +KA+ I P L+
Sbjct: 99 NLARALEHEANGNSSAAYECYSKAVDISPSIAHELI 134
>At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 721
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -3
Query: 464 FKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321
FK G + + N AL I P + + R ALY + +A+ D+E
Sbjct: 541 FKVGMWESSIEDCNHALLILPSYTKPRLQRAALYTKLERWAEAVSDYE 588
>At5g56290.1 68418.m07026 peroxisomal targeting signal type 1
receptor (PEX5) identical to GI:3603353; contains Pfam
profile PF00515 TPR Domain
Length = 728
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -3
Query: 479 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAI 333
EG E F+ G SEA L + +P N EG G +A + ++AI
Sbjct: 463 EGQELFRKGLLSEAALALEAEVMKNPENAEGWRLLGVTHAENDDDQQAI 511
>At3g53560.1 68416.m05914 chloroplast lumen common family protein
Length = 340
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -3
Query: 455 GRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321
G+HSEA + + + +PR+ + +G +Y KA E F+
Sbjct: 253 GKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKKDKAEEQFD 297
>At3g09490.1 68416.m01128 chloroplast lumen common family protein 2
TPR domains; similar to chloroplast lumen proteins
[GI:4056493 (F3G5.19)(At2g37400)] and [GI:7413648
(T22P11.180),(At5g02590)] [Arabidopsis thaliana]; +
Length = 334
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -3
Query: 464 FKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321
FK+ +H +A L++ + I+P + + + + G + AIE FE
Sbjct: 124 FKSDKHEQAIVFLDRLIEIEPYERKWPAMKARILSYHGKSESAIEAFE 171
>At1g02330.1 68414.m00178 expressed protein contains similarity to
hepatocellular carcinoma-associated antigen 59
GI:7158847 from [Homo sapiens]
Length = 279
Score = 28.3 bits (60), Expect = 6.4
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = -1
Query: 289 NARKYLGETLVAL-GRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKP 113
N KY+ + L GR+ +D ++ K ED L IP H + + S+ ++++
Sbjct: 100 NMVKYIEQELAKKRGRNIDDAEEVENELKRVEDELYKIPDHLKVKKR----SSEESSTQW 155
Query: 112 LIEPAELLLPGLTGAKSYEMKETLKQLLNLTR 17
AE+ LP K+ E E K+LL R
Sbjct: 156 TTGIAEVQLPIEYKLKNIEETEAAKKLLQERR 187
>At5g09420.1 68418.m01091 chloroplast outer membrane translocon
subunit, putative similar to component of chloroplast
outer membrane translocon Toc64 [Pisum sativum]
GI:7453538; contains Pfam profiles PF01425: Amidase,
PF00515: TPR Domain
Length = 603
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 443 EAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDF 324
+A Q KA+ ID +NV+ + RG + +K+A DF
Sbjct: 540 QAEQDCTKAMLIDKKNVKAYLRRGTARESLVRYKEAAADF 579
>At3g60050.1 68416.m06706 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 473
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 160 QNSLDFLKSKTTASKPLIEPAELLLPGLTGAKSYEMKE-TLKQLL 29
Q + F+KSKT +P +L L G K Y++ E KQ+L
Sbjct: 202 QAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQML 246
>At2g06210.1 68415.m00684 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 1064
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
Frame = -3
Query: 464 FKAGRHSEAFQCLNKALSI--------DPRNVEGLVARGAL 366
F GR SE+ Q +AL + DP NVE LVA G +
Sbjct: 173 FNRGRFSESLQLYKRALQVFPGCPAALDPDNVEALVALGIM 213
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,626,134
Number of Sequences: 28952
Number of extensions: 306513
Number of successful extensions: 914
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1853336000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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