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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_M02
         (814 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g42810.1 68415.m05300 serine/threonine protein phosphatase, p...    46   2e-05
At3g04240.1 68416.m00448 O-linked N-acetyl glucosamine transfera...    42   6e-04
At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containi...    40   0.003
At5g21990.1 68418.m02557 tetratricopeptide repeat (TPR)-containi...    36   0.024
At4g12400.1 68417.m01960 stress-inducible protein, putative simi...    36   0.032
At3g11540.2 68416.m01408 gibberellin signal transduction protein...    36   0.042
At3g11540.1 68416.m01407 gibberellin signal transduction protein...    36   0.042
At1g04190.1 68414.m00409 tetratricopeptide repeat (TPR)-containi...    33   0.17 
At4g02100.1 68417.m00281 DNAJ heat shock N-terminal domain-conta...    33   0.30 
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa...    32   0.39 
At3g17970.1 68416.m02286 chloroplast outer membrane translocon s...    32   0.52 
At1g12270.1 68414.m01419 stress-inducible protein, putative simi...    31   0.69 
At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containi...    31   0.91 
At5g08250.1 68418.m00969 cytochrome P450 family protein contains...    30   1.6  
At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containi...    30   1.6  
At5g12430.1 68418.m01461 DNAJ heat shock N-terminal domain-conta...    30   2.1  
At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containi...    30   2.1  
At4g31820.1 68417.m04522 phototropic-responsive NPH3 family prot...    29   2.8  
At4g28600.1 68417.m04090 calmodulin-binding protein similar to p...    29   2.8  
At2g32450.1 68415.m03964 calcium-binding EF hand family protein ...    29   2.8  
At1g75160.1 68414.m08730 expressed protein contains Pfam profile...    29   2.8  
At1g29630.1 68414.m03622 exonuclease, putative similar to Swiss-...    29   2.8  
At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containi...    29   3.7  
At5g56290.1 68418.m07026 peroxisomal targeting signal type 1 rec...    28   6.4  
At3g53560.1 68416.m05914 chloroplast lumen common family protein       28   6.4  
At3g09490.1 68416.m01128 chloroplast lumen common family protein...    28   6.4  
At1g02330.1 68414.m00178 expressed protein contains similarity t...    28   6.4  
At5g09420.1 68418.m01091 chloroplast outer membrane translocon s...    28   8.5  
At3g60050.1 68416.m06706 pentatricopeptide (PPR) repeat-containi...    28   8.5  
At2g06210.1 68415.m00684 phosphoprotein-related low similarity t...    28   8.5  

>At2g42810.1 68415.m05300 serine/threonine protein phosphatase,
           putative similar to SP|P53042 Serine/threonine protein
           phosphatase 5 (EC 3.1.3.16) (PP5) (Protein phosphatase
           T) (PPT) {Rattus norvegicus}; contains Pfam profiles
           PF00149: Ser/Thr protein phosphatase, PF00515: TPR
           Domain
          Length = 484

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 27/71 (38%), Positives = 36/71 (50%)
 Frame = -3

Query: 533 ADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANS 354
           A EL    A  WA R+ A    H K   +  A Q  +KA+ +D R  +G   RGA Y   
Sbjct: 39  AIELNSNNAVYWANRAFA----HTKLEEYGSAIQDASKAIEVDSRYSKGYYRRGAAYLAM 94

Query: 353 GTFKKAIEDFE 321
           G FK A++DF+
Sbjct: 95  GKFKDALKDFQ 105


>At3g04240.1 68416.m00448 O-linked N-acetyl glucosamine transferase,
           putative similar to O-GlcNAc transferase, Homo sapiens
           [SP|O15294], Rattus norvegicus [SP|P56558]; contains
           Pfam profile PF00515: TPR Domain; identical to cDNA
           GI:18139886
          Length = 977

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 25/75 (33%), Positives = 37/75 (49%)
 Frame = -3

Query: 548 ASSEYADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGA 369
           ASS +   L         F ++A  I + + G +S+A  C N+ L IDP   + LV RG 
Sbjct: 378 ASSLFKATLAVTTGLSAPFNNLA--IIYKQQGNYSDAISCYNEVLRIDPLAADALVNRGN 435

Query: 368 LYANSGTFKKAIEDF 324
            Y   G   +AI+D+
Sbjct: 436 TYKEIGRVTEAIQDY 450



 Score = 31.9 bits (69), Expect = 0.52
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 253 LGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSL 149
           LG + +D  ++ EA + Y  CLA+ P H +A  +L
Sbjct: 331 LGNALKDIGRVDEAVRCYNQCLALQPNHPQAMANL 365



 Score = 31.5 bits (68), Expect = 0.69
 Identities = 23/66 (34%), Positives = 32/66 (48%)
 Frame = -3

Query: 533 ADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANS 354
           A ELR   A  W+  + A    + + GR SEA QC  +ALS++P  V+     G L    
Sbjct: 147 AIELRPNFADAWSNLASA----YMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQ 202

Query: 353 GTFKKA 336
           G   +A
Sbjct: 203 GLIHEA 208


>At5g65160.1 68418.m08195 tetratricopeptide repeat (TPR)-containing
           protein contains Pfam profile PF00515 TPR Domain
          Length = 593

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 22/51 (43%), Positives = 27/51 (52%)
 Frame = -3

Query: 479 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIED 327
           +G E FK+GR  EA     + L  DPRN   L  R A  +  G F K+IED
Sbjct: 476 KGNELFKSGRFQEACAAYGEGLDHDPRNSVLLCNRAACRSKLGQFDKSIED 526


>At5g21990.1 68418.m02557 tetratricopeptide repeat (TPR)-containing
           protein contains Pfam profile PF00515: TPR Domain
          Length = 554

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -3

Query: 467 HFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIED 327
           + K  +H E  +  ++ L  D RNV+ L  RG  Y + G F+ A+ D
Sbjct: 156 YLKTNQHEECIKEGSEVLGYDARNVKALYRRGQAYRDLGLFEDAVSD 202


>At4g12400.1 68417.m01960 stress-inducible protein, putative similar
           to sti (stress inducible protein) [Glycine max]
           GI:872116; contains Pfam profile PF00515 TPR Domain
          Length = 530

 Score = 35.9 bits (79), Expect = 0.032
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = -3

Query: 539 EYADELRQAQASKW-AFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALY 363
           E  +E RQ +  K  A +   EG   +K      A +   KA+ +D  ++  L  R A+Y
Sbjct: 215 ELTEEERQKKERKEKALKEKGEGNVAYKKKDFGRAVEHYTKAMELDDEDISYLTNRAAVY 274

Query: 362 ANSGTFKKAIED 327
              G +++ IED
Sbjct: 275 LEMGKYEECIED 286


>At3g11540.2 68416.m01408 gibberellin signal transduction protein
           (SPINDLY) identical to spindly GB:AAC49446 (GI:1589778)
           [Arabidopsis thaliana]; contains Pfam profile PF00515
           TPR Domain
          Length = 732

 Score = 35.5 bits (78), Expect = 0.042
 Identities = 22/85 (25%), Positives = 37/85 (43%)
 Frame = -3

Query: 575 NFSYLRGRFASSEYADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRN 396
           N    R +FA +    E    + SK     + +GI      + + AF C ++A+ +DP N
Sbjct: 51  NILRARNKFADALALYEAMLEKDSKNVEAHIGKGICLQTQNKGNLAFDCFSEAIRLDPHN 110

Query: 395 VEGLVARGALYANSGTFKKAIEDFE 321
              L   G L+   G   +A E ++
Sbjct: 111 ACALTHCGILHKEEGRLVEAAESYQ 135


>At3g11540.1 68416.m01407 gibberellin signal transduction protein
           (SPINDLY) identical to spindly GB:AAC49446 (GI:1589778)
           [Arabidopsis thaliana]; contains Pfam profile PF00515
           TPR Domain
          Length = 914

 Score = 35.5 bits (78), Expect = 0.042
 Identities = 22/85 (25%), Positives = 37/85 (43%)
 Frame = -3

Query: 575 NFSYLRGRFASSEYADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRN 396
           N    R +FA +    E    + SK     + +GI      + + AF C ++A+ +DP N
Sbjct: 51  NILRARNKFADALALYEAMLEKDSKNVEAHIGKGICLQTQNKGNLAFDCFSEAIRLDPHN 110

Query: 395 VEGLVARGALYANSGTFKKAIEDFE 321
              L   G L+   G   +A E ++
Sbjct: 111 ACALTHCGILHKEEGRLVEAAESYQ 135



 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/36 (50%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -1

Query: 253 LGRSYEDENQITEAQKAYEDCLAIIPFHEEA-QNSL 149
           LG  Y D   IT A  AYE+CL I P    A QN L
Sbjct: 403 LGVLYRDAGNITMAIDAYEECLKIDPDSRNAGQNRL 438



 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 283 RKYLGETLVALGRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSL 149
           R    E    +G  Y++   +  A   YE CLA+ P  E A+N++
Sbjct: 216 RPMYAEAYCNMGVIYKNRGDLEMAITCYERCLAVSPNFEIAKNNM 260


>At1g04190.1 68414.m00409 tetratricopeptide repeat (TPR)-containing
           protein low similarity to protein antigen LmSTI1
           [Leishmania major] GI:1698880; contains Pfam profile
           PF00515 TPR Domain; EST gb|Z47802 and gb|Z48402 come
           from this gene
          Length = 328

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = -3

Query: 533 ADELRQAQASKWAFRSVAE-GIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYAN 357
           A++  +A     A +S+ E G E FKAG   +A     +A+ +DP N      R A + +
Sbjct: 2   AEKAGKATNGGEAEKSLKEKGNEFFKAGNFLKAAALYTQAIKLDPSNATLYSNRAAAFLS 61

Query: 356 SGTFKKAIEDFET 318
                KA+ D ET
Sbjct: 62  LVKLSKALADAET 74


>At4g02100.1 68417.m00281 DNAJ heat shock N-terminal
           domain-containing protein contains Pfam profiles
           PF00226: DnaJ domain, PF00515: TPR Domain
          Length = 546

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -3

Query: 458 AGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321
           AGR +E+    NK L++DP  ++ L  R AL  +   F  ++ D E
Sbjct: 290 AGRIAESIADCNKTLALDPSCLQALETRAALLESVRCFPDSLHDLE 335


>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
           profiles PF00085: Thioredoxin, PF00515: TPR Domain;
           similar to tetratricopeptide repeat protein 2
           (GI:7248701) [Drosophila melanogaster]; similar to DnaJ
           homolog subfamily C member 7 (Tetratricopeptide repeat
           protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
           [Homo sapiens]
          Length = 699

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = -3

Query: 491 RSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIED 327
           R+ A G + +K+ R++EA     + L +DP N      R A +   G ++++IED
Sbjct: 467 RARARGNDLYKSERYTEASSAYAEGLRLDPCNAILYCNRAACWFKLGMWERSIED 521


>At3g17970.1 68416.m02286 chloroplast outer membrane translocon
           subunit, putative similar to Toc64 [Pisum sativum]
           GI:7453538; contains Pfam profile PF00515 TPR Domain
          Length = 589

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 467 HFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDF 324
           + + G   +A +   KA+++D +NV+  + RG      G  K AIEDF
Sbjct: 518 YLELGGFLQAEEDCTKAITLDKKNVKAYLRRGTAREMLGDCKGAIEDF 565


>At1g12270.1 68414.m01419 stress-inducible protein, putative similar
           to sti (stress inducible protein) [Glycine max]
           GI:872116; contains Pfam profile PF00515 TPR Domain
          Length = 572

 Score = 31.5 bits (68), Expect = 0.69
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = -3

Query: 539 EYADELRQAQASKWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYA 360
           E  +E  + +  + A +    G   +K      A Q  + A+ ID  ++  L  R A+Y 
Sbjct: 230 EVTEEKEKKERKEKAKKEKELGNAAYKKKDFETAIQHYSTAIEIDDEDISYLTNRAAVYL 289

Query: 359 NSGTFKKAIED 327
             G + + IED
Sbjct: 290 EMGKYNECIED 300


>At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containing
           protein contains Pfam profile PF00515 TPR Domain
          Length = 691

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 19/59 (32%), Positives = 26/59 (44%)
 Frame = -3

Query: 503 KWAFRSVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIED 327
           K   R+   G E F +GR SEA       L  D  N      R A +   G ++K++ED
Sbjct: 456 KMVVRARTRGNELFSSGRFSEACVAYGDGLKQDDSNSVLYCNRAACWYKLGLWEKSVED 514


>At5g08250.1 68418.m00969 cytochrome P450 family protein contains
           Pfam profile: PF00067 cytochrome P450
          Length = 488

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -3

Query: 437 FQCLNKALSIDPRNVEGLV-ARGALYANSGTFKKAIED 327
           F  LN  ++ DPRNVE L+  R ++Y     F++ ++D
Sbjct: 43  FSTLNCVVTCDPRNVEHLLKTRFSIYPKGSYFRETMQD 80


>At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containing
           protein contains Pfam profile PF00515: TPR Domain
          Length = 883

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = -3

Query: 449 HSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIED 327
           H +A +C+ + L +D R  +    RG ++   G  +KAI++
Sbjct: 483 HCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQE 523


>At5g12430.1 68418.m01461 DNAJ heat shock N-terminal domain-containing
            protein similarity to TETRATRICOPEPTIDE REPEAT PROTEIN 2
            , human, SWISSPROT:TTC2_HUMAN; contains Pfam profiles
            PF00226: DnaJ domain, PF00515: TPR Domain
          Length = 1165

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
 Frame = -3

Query: 491  RSVAEGIEHFKAGRHSEAFQCLNKALSID----PRNVEGLVARGALYANSGTFKKAIED 327
            R  A G E F++GRH+EA +    AL+ +    P        R A Y   G F  AI D
Sbjct: 881  RLKAAGNEAFQSGRHTEAVEHYTAALACNVESRPFTAVCFCNRAAAYKALGQFSDAIAD 939


>At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containing
           protein contains Pfam profile PF00515 TPR Domain
          Length = 682

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -3

Query: 476 GIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIED 327
           G E F +GR+SEA       L +D  N      R A +   G ++K+++D
Sbjct: 456 GNELFSSGRYSEASVAYGDGLKLDAFNSVLYCNRAACWFKLGMWEKSVDD 505


>At4g31820.1 68417.m04522 phototropic-responsive NPH3 family protein
           contains NPH3 family domain, Pfam:PF03000
          Length = 571

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = -1

Query: 154 SLDFLKSKTTASKPLIEPAELLLPGLTGAKSYEMKETLKQLLNLT 20
           S++ L S+ +++K L+E    LLP +  A SY     L +LL ++
Sbjct: 257 SMESLTSEASSNKDLVETVVFLLPKVNRAMSYSSCSFLLKLLKVS 301


>At4g28600.1 68417.m04090 calmodulin-binding protein similar to
           pollen-specific calmodulin-binding protein MPCBP
           GI:10086260 from [Zea mays]
          Length = 739

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 479 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSG 351
           EG+ + + G+  EA +    AL IDP +V  L ++  +    G
Sbjct: 632 EGVLYNRRGQLEEAMEAFTTALDIDPMHVPSLTSKAEILLEVG 674


>At2g32450.1 68415.m03964 calcium-binding EF hand family protein low
           similarity to O-linked GlcNAc transferase [Homo sapiens]
           GI:2266994; contains Pfam profiles PF00036: EF hand,
           PF00515: TPR Domain
          Length = 802

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 31/114 (27%), Positives = 46/114 (40%)
 Frame = -1

Query: 343 KRP*KILRPXLKLNPNHANARKYLGETLVALGRSYEDENQITEAQKAYEDCLAIIPFHEE 164
           +R  ++ +  + L P H +A       L  LG  Y D  +   A + Y   LA+ P H  
Sbjct: 390 ERAIEVFQRAIDLKPGHVDA-------LYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWR 442

Query: 163 AQNSLDFLKSKTTASKPLIEPAELLLPGLTGAKSYEMKETLKQLLNLTRKKKKK 2
           AQ  L+   S   A +   E    L   L      E+ + +  L  L +KKK K
Sbjct: 443 AQ--LNKAVSLLGAGE-TEEAKRALKEALKMTNRVELHDAVSHLKQLQKKKKVK 493


>At1g75160.1 68414.m08730 expressed protein contains Pfam profile
           PF04788: Protein of unknown function (DUF620)
          Length = 395

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 20/66 (30%), Positives = 30/66 (45%)
 Frame = -1

Query: 631 PTAFNSSLNILALPTCTAQISHI*EEDSLHRNTQMNYAKHKQVNGHFVLWQKALNILKLE 452
           PTA N+  ++ A+     Q S +   +     T +   K     G FVLWQK  N+  LE
Sbjct: 134 PTALNAVKSMYAVGQVRMQGSEMVAGEDEGTGTPVRLGKGSFEVGGFVLWQKNPNLWFLE 193

Query: 451 DILKHF 434
            ++  F
Sbjct: 194 LVVSGF 199


>At1g29630.1 68414.m03622 exonuclease, putative similar to
           Swiss-Prot:P53695 exonuclease I (EXO I)
           [Schizosaccharomyces pombe]
          Length = 317

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 488 SVAEGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLV 381
           ++A  +EH   G  S A++C +KA+ I P     L+
Sbjct: 99  NLARALEHEANGNSSAAYECYSKAVDISPSIAHELI 134


>At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containing
           protein low similarity to SP|Q99615 DnaJ homolog
           subfamily C member 7 (Tetratricopeptide repeat protein
           2) {Homo sapiens}; contains Pfam profile PF00515: TPR
           Domain
          Length = 721

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -3

Query: 464 FKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321
           FK G    + +  N AL I P   +  + R ALY     + +A+ D+E
Sbjct: 541 FKVGMWESSIEDCNHALLILPSYTKPRLQRAALYTKLERWAEAVSDYE 588


>At5g56290.1 68418.m07026 peroxisomal targeting signal type 1
           receptor (PEX5) identical to GI:3603353; contains Pfam
           profile PF00515 TPR Domain
          Length = 728

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -3

Query: 479 EGIEHFKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAI 333
           EG E F+ G  SEA   L   +  +P N EG    G  +A +   ++AI
Sbjct: 463 EGQELFRKGLLSEAALALEAEVMKNPENAEGWRLLGVTHAENDDDQQAI 511


>At3g53560.1 68416.m05914 chloroplast lumen common family protein
          Length = 340

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -3

Query: 455 GRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321
           G+HSEA +   + +  +PR+    + +G +Y       KA E F+
Sbjct: 253 GKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKKDKAEEQFD 297


>At3g09490.1 68416.m01128 chloroplast lumen common family protein 2
           TPR domains; similar to chloroplast lumen proteins
           [GI:4056493 (F3G5.19)(At2g37400)] and [GI:7413648
           (T22P11.180),(At5g02590)] [Arabidopsis thaliana]; +
          Length = 334

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = -3

Query: 464 FKAGRHSEAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDFE 321
           FK+ +H +A   L++ + I+P   +    +  + +  G  + AIE FE
Sbjct: 124 FKSDKHEQAIVFLDRLIEIEPYERKWPAMKARILSYHGKSESAIEAFE 171


>At1g02330.1 68414.m00178 expressed protein contains similarity to
           hepatocellular carcinoma-associated antigen 59
           GI:7158847 from [Homo sapiens]
          Length = 279

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
 Frame = -1

Query: 289 NARKYLGETLVAL-GRSYEDENQITEAQKAYEDCLAIIPFHEEAQNSLDFLKSKTTASKP 113
           N  KY+ + L    GR+ +D  ++    K  ED L  IP H + +       S+ ++++ 
Sbjct: 100 NMVKYIEQELAKKRGRNIDDAEEVENELKRVEDELYKIPDHLKVKKR----SSEESSTQW 155

Query: 112 LIEPAELLLPGLTGAKSYEMKETLKQLLNLTR 17
               AE+ LP     K+ E  E  K+LL   R
Sbjct: 156 TTGIAEVQLPIEYKLKNIEETEAAKKLLQERR 187


>At5g09420.1 68418.m01091 chloroplast outer membrane translocon
           subunit, putative similar to component of chloroplast
           outer membrane translocon Toc64 [Pisum sativum]
           GI:7453538; contains Pfam profiles PF01425: Amidase,
           PF00515: TPR Domain
          Length = 603

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 443 EAFQCLNKALSIDPRNVEGLVARGALYANSGTFKKAIEDF 324
           +A Q   KA+ ID +NV+  + RG    +   +K+A  DF
Sbjct: 540 QAEQDCTKAMLIDKKNVKAYLRRGTARESLVRYKEAAADF 579


>At3g60050.1 68416.m06706 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 473

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -1

Query: 160 QNSLDFLKSKTTASKPLIEPAELLLPGLTGAKSYEMKE-TLKQLL 29
           Q  + F+KSKT   +P       +L  L G K Y++ E   KQ+L
Sbjct: 202 QAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQML 246


>At2g06210.1 68415.m00684 phosphoprotein-related low similarity to
           phosphoprotein from Mus musculus GI:1236239; contains
           Pfam profile PF00515 TPR Domain
          Length = 1064

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
 Frame = -3

Query: 464 FKAGRHSEAFQCLNKALSI--------DPRNVEGLVARGAL 366
           F  GR SE+ Q   +AL +        DP NVE LVA G +
Sbjct: 173 FNRGRFSESLQLYKRALQVFPGCPAALDPDNVEALVALGIM 213


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,626,134
Number of Sequences: 28952
Number of extensions: 306513
Number of successful extensions: 914
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1853336000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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