BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_M01 (772 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_02_0012 - 7346282-7347136,7347234-7347593 46 3e-05 03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 44 1e-04 11_01_0750 - 6315126-6315896,6316371-6316784 43 2e-04 11_01_0771 + 6453130-6454488 42 5e-04 11_02_0011 - 7337618-7338496,7338596-7338991 42 7e-04 03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 40 0.002 05_06_0044 - 25150322-25151260 33 0.19 01_01_1152 + 9170628-9171899 33 0.33 01_06_0824 - 32243495-32244319,32244449-32244859 32 0.58 03_05_0001 - 19386264-19386284,19386446-19386517,19386614-193873... 31 0.77 12_01_1067 - 11009508-11010071,11010122-11010679 28 7.2 06_03_0673 + 23394027-23394094,23394267-23394539,23394613-233949... 28 7.2 11_01_0767 + 6438648-6438809,6439146-6440000 28 9.5 >11_02_0012 - 7346282-7347136,7347234-7347593 Length = 404 Score = 46.4 bits (105), Expect = 3e-05 Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 9/168 (5%) Frame = -2 Query: 609 YGTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKD--VDDFGLEDVDVKLPRF 436 YG + SM + LP R + + A + +D ++ D+++PRF Sbjct: 236 YGENVGLSMYIFLPDARDGLPALVDKMAVASSGTASSSFLRDHRPGRRRIKVGDLRVPRF 295 Query: 435 QISTNVVLNKPLNDMGV---YDIFQPDLANFQRITKENIFVSAIVHKADIEXXXXXXXXX 265 ++S +N+ L MG+ +D+ + DL+ I E + V ++H+A +E Sbjct: 296 KVSFYSEMNEVLKGMGIGAAFDVGKVDLSGM--IDGELVVVEKVMHRAVVEVNEEGTEAA 353 Query: 264 XXXXXXXTD---RISAPA-FHANRPFVYFVMEKTTTTVIFSGIYSKPT 133 +++P F A+ PF +FV+E+ + V+F+G PT Sbjct: 354 AATACTMKFLCLTLTSPVDFVADHPFAFFVVEEKSDAVLFAGHVLDPT 401 >03_05_0293 + 22849103-22849513,22849670-22849756,22850156-22850284, 22850507-22851262,22853474-22854250 Length = 719 Score = 44.4 bits (100), Expect = 1e-04 Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 9/167 (5%) Frame = -2 Query: 624 VXELPYGTDG---KYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVD 454 V +LPY G ++SM ++LP + + + + +N + F L+K + + Sbjct: 299 VLKLPYQQGGDKRQFSMYILLPEAQDGLWSLAEK---LNSEPEF--LEKHIPTRQVTVGQ 353 Query: 453 VKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITK---ENIFVSAIVHKADIEXXX 283 KLP+F+IS + L +G++ F + + + +N+FVS++ HK+ +E Sbjct: 354 FKLPKFKISFGFEASDLLKSLGLHLPFSSEADLTEMVDSPEGKNLFVSSVFHKSFVEVNE 413 Query: 282 XXXXXXXXXXXXXTDRISAPA---FHANRPFVYFVMEKTTTTVIFSG 151 T R SAP F A+ PF++ + E T V+F G Sbjct: 414 EGTEAAAATAAVITLR-SAPIAEDFVADHPFLFLIQEDMTGVVLFVG 459 Score = 39.9 bits (89), Expect = 0.002 Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 7/189 (3%) Frame = -2 Query: 681 MMYQKGQFPXSNLKKLKAFVXELPY---GTDGKYSMLVILPHPRTKIADMYKNFADVNLK 511 M +K Q+ S+ LK V +LPY G ++SM ++LP + + + + +N + Sbjct: 535 MSTRKKQY-LSSYDSLK--VLKLPYLQGGDKRQFSMYILLPEAQDGLWSLAEK---LNSE 588 Query: 510 DVFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITK-- 337 F ++ + + KLP+F+IS + L +G+ +F ++ + + Sbjct: 589 PEF--MENHIPMRPVHVGQFKLPKFKISFGFGASGLLKGLGLPLLFGSEVDLIEMVDSPG 646 Query: 336 -ENIFVSAIVHKADIE-XXXXXXXXXXXXXXXXTDRISAPAFHANRPFVYFVMEKTTTTV 163 +N+FVS++ HK+ IE R F A+ PF++ + E T + Sbjct: 647 AQNLFVSSVFHKSFIEVNEEGTEATAAVMVSMEHSRPRRLNFVADHPFMFLIREDVTGVI 706 Query: 162 IFSGIYSKP 136 +F G P Sbjct: 707 LFIGHVVNP 715 >11_01_0750 - 6315126-6315896,6316371-6316784 Length = 394 Score = 43.2 bits (97), Expect = 2e-04 Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 9/173 (5%) Frame = -2 Query: 624 VXELPYG---TDGKYSMLVILPHPRTKIADM-YKNFADVNLKDVFKQLQKDVDDFGLEDV 457 V +LPY + K+SM + LP + ++ K F++ + +K V Sbjct: 228 VIKLPYKQGKNERKFSMYIFLPDDHDGLFELTQKIFSEPMFLEQHLPTEKC-------HV 280 Query: 456 DVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKEN-----IFVSAIVHKADIE 292 + +P F+IS + + L DMG+ F + A F + KE+ +F+S ++HKA +E Sbjct: 281 GISVPNFKISFQIDVKDFLKDMGLELPFLRE-AEFSDMIKEDDSSGPLFLSDVLHKAVLE 339 Query: 291 XXXXXXXXXXXXXXXXTDRISAPAFHANRPFVYFVMEKTTTTVIFSGIYSKPT 133 + A F A+ PF + + E+ + TVIF G P+ Sbjct: 340 VDQKGIEETSVSMGLGKP-LPAQHFKADHPFFFMIREEVSGTVIFMGHVLDPS 391 >11_01_0771 + 6453130-6454488 Length = 452 Score = 41.9 bits (94), Expect = 5e-04 Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 8/117 (6%) Frame = -2 Query: 456 DVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKEN-----IFVSAIVHKADIE 292 + ++P+F++S + L +G+ F P+LA+ + +++ +FV I HKA IE Sbjct: 335 EFRVPKFKVSCGGSVVGALEQLGLRLPFSPELADLSDMVEDDGSGWPLFVGDIQHKAVIE 394 Query: 291 XXXXXXXXXXXXXXXXTDRISAPA---FHANRPFVYFVMEKTTTTVIFSGIYSKPTV 130 P F A PF YF++E+ ++ V+F+G P++ Sbjct: 395 VNEEGTVAAAATMTRMLPSGVPPPPVDFVAEHPFAYFIVEEMSSAVVFAGHIVDPSM 451 >11_02_0011 - 7337618-7338496,7338596-7338991 Length = 424 Score = 41.5 bits (93), Expect = 7e-04 Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 8/160 (5%) Frame = -2 Query: 588 SMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLN 409 SM + LP R + + A + F L+ E D+++PRF++S +N Sbjct: 263 SMYIFLPDERDGLPALVDKMAASSSSSSF--LRDHRPTRRREVGDLRVPRFKVSFYSQIN 320 Query: 408 KPLNDMGV---YDIFQPDLANFQRITKEN---IFVSAIVHKADIEXXXXXXXXXXXXXXX 247 L MGV +D + DL+ + + V + H+A +E Sbjct: 321 GVLQGMGVTAAFDAGEADLSGMAEGVDQRGGGLVVEEVFHRAVVEVNEEGTEAAASTACT 380 Query: 246 XTD-RISAPA-FHANRPFVYFVMEKTTTTVIFSGIYSKPT 133 +S P F A+ PF +FV+E+T+ V+F+G PT Sbjct: 381 IRLLSMSYPEDFVADHPFAFFVVEETSGAVLFAGHVLDPT 420 >03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 Length = 258 Score = 40.3 bits (90), Expect = 0.002 Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 9/172 (5%) Frame = -2 Query: 624 VXELPY--GTD-GKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVD 454 V +LPY G D ++SM ++LP + ++ A +N + F L+K + + Sbjct: 91 VLKLPYQKGRDLRQFSMYILLPEAQD---GLWSLAAKLNSEPEF--LEKRIPTRQVTVGK 145 Query: 453 VKLPRFQISTNVVLNKPLNDMGVYDIF--QPDLANFQRIT-KENIFVSAIVHKADIEXXX 283 KLP+F+IS + L +G+ F + DL + N+FVS++ HK+ ++ Sbjct: 146 FKLPKFKISFGFEASDLLKILGLQLPFSSKADLTGMVGSPERHNLFVSSLFHKSFVQVDE 205 Query: 282 XXXXXXXXXXXXXTDRISAPA---FHANRPFVYFVMEKTTTTVIFSGIYSKP 136 + R SAP F A+ PF++ + E T V+F G P Sbjct: 206 EGTEAAAASAAVVSFR-SAPVTVDFVADHPFLFLIREDMTGVVLFIGHVVNP 256 >05_06_0044 - 25150322-25151260 Length = 312 Score = 33.5 bits (73), Expect = 0.19 Identities = 33/168 (19%), Positives = 71/168 (42%), Gaps = 8/168 (4%) Frame = -2 Query: 606 GTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKLPRFQIS 427 G D ++M + LP R + ++ + A N ++ + ++ K+P+F++S Sbjct: 148 GGDKMFAMYIYLPDDRDGLPELARKLAS-NPAAFLRRTIVPAQPVAVGEL--KIPKFEVS 204 Query: 426 TNVVLNKPLNDMGVYDIFQPDLAN-FQRIT---KENIFVSAIVHKADI----EXXXXXXX 271 V ++ L + G+ F P N F + + VS+++H+ + E Sbjct: 205 LKVEASRLLREFGLDLPFLPAADNSFSGMLLDPPQGTAVSSLLHQCFVNVNEEGTVAAAG 264 Query: 270 XXXXXXXXXTDRISAPAFHANRPFVYFVMEKTTTTVIFSGIYSKPTVY 127 F A+ PF++F++E+ + V+F+G P ++ Sbjct: 265 TVGEIMGFAMPDDQIVDFVADHPFLFFIVEEVSGLVVFAGQVVNPLLH 312 >01_01_1152 + 9170628-9171899 Length = 423 Score = 32.7 bits (71), Expect = 0.33 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 3/107 (2%) Frame = -2 Query: 447 LPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKENIFVSAIVHKADIEXXXXXXXX 268 +P+F+ S + +GV F + + +F++ + H+A IE Sbjct: 314 VPKFKFSFKFEAKSDMRKLGVTRAFAGGDFSGMVTGGDGLFIAEVYHQATIEVDELGTVA 373 Query: 267 XXXXXXXXTDRISA--PA-FHANRPFVYFVMEKTTTTVIFSGIYSKP 136 + S+ P F A+RPF++ V+E+ T V+F G P Sbjct: 374 AASTAVVMMQKGSSLPPVDFVADRPFLFAVVEELTGAVLFLGHVVNP 420 >01_06_0824 - 32243495-32244319,32244449-32244859 Length = 411 Score = 31.9 bits (69), Expect = 0.58 Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 12/117 (10%) Frame = -2 Query: 447 LPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITK-----ENIFVSAIVHKADIEXXX 283 +PRF +S + L +G+ F+ A+ + + E I VSA+ H++ +E Sbjct: 292 VPRFTLSYKTNAAETLRQLGLRLPFEYPGADLSEMVESSPEAEKIVVSAVYHESFVEVNE 351 Query: 282 XXXXXXXXXXXXXTDRISAPA-------FHANRPFVYFVMEKTTTTVIFSGIYSKPT 133 T +AP+ F A+ PF++ + E T V+F+G + P+ Sbjct: 352 EGTEAAAATAVVMTLGCAAPSAPVHVVDFVADHPFMFLIKEDLTGVVVFAGQVTNPS 408 >03_05_0001 - 19386264-19386284,19386446-19386517,19386614-19387357, 19387454-19388884,19388953-19389118,19392035-19392114, 19392393-19392462,19392550-19392761,19392837-19392890, 19393471-19393623,19393715-19393930,19394029-19394248, 19394332-19394399,19394510-19394643,19394755-19394854, 19394943-19395421,19395506-19395699,19396270-19396355, 19396364-19396444,19396842-19397023,19397305-19397346, 19398247-19398558,19399374-19399434,19399435-19399617, 19399744-19399863,19400380-19401051,19402597-19402668, 19402742-19402865,19403563-19403651,19405023-19405097 Length = 2170 Score = 31.5 bits (68), Expect = 0.77 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 537 CTCLRSSFSGAGV*PASSTFRRCRKEVP 620 C CL S SG G+ PA +F CR + P Sbjct: 536 CPCLPESSSGCGILPAPPSFNPCRCDKP 563 >12_01_1067 - 11009508-11010071,11010122-11010679 Length = 373 Score = 28.3 bits (60), Expect = 7.2 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -3 Query: 641 RSLRPSXWNFLTAPTESTRCWSYSRTRERRSQTC 540 + L PS W+ L A T +SRT E R QTC Sbjct: 164 KGLTPSSWDHLDAVAGGT---FFSRTSEERLQTC 194 >06_03_0673 + 23394027-23394094,23394267-23394539,23394613-23394958, 23395031-23395168,23395260-23395385,23395464-23395652, 23395723-23396202,23396274-23397236 Length = 860 Score = 28.3 bits (60), Expect = 7.2 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +3 Query: 291 PLYQLYALWPTRIYSPL*SAGSWLSLAGICRTLPCRLMAYLGR 419 P+ +ALW T + L A SWL +A + + P + YL R Sbjct: 69 PVADAHALWVTSVACELWLAASWL-IAQLPKLSPANRVTYLDR 110 >11_01_0767 + 6438648-6438809,6439146-6440000 Length = 338 Score = 27.9 bits (59), Expect = 9.5 Identities = 9/29 (31%), Positives = 19/29 (65%) Frame = -2 Query: 219 FHANRPFVYFVMEKTTTTVIFSGIYSKPT 133 F A+ PF +F++E+ + ++F+G P+ Sbjct: 307 FVADHPFAFFIVEERSQAIVFAGHVLDPS 335 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,450,885 Number of Sequences: 37544 Number of extensions: 314021 Number of successful extensions: 738 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 716 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 732 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2075009728 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -