BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_M01 (772 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 77 1e-14 SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 77 1e-14 SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 70 2e-12 SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0 SB_49709| Best HMM Match : UPAR_LY6 (HMM E-Value=1.8) 29 4.2 SB_22586| Best HMM Match : DUF287 (HMM E-Value=9.7) 28 7.3 SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 28 7.3 >SB_38975| Best HMM Match : Serpin (HMM E-Value=0) Length = 380 Score = 77.4 bits (182), Expect = 1e-14 Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 2/181 (1%) Frame = -2 Query: 687 VNMMYQKGQFPXSNLKKLKAFVXELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKD 508 V MYQ +F L + ELPY + K SM+V+LP+ ++ + K + +N K+ Sbjct: 196 VQFMYQSSEFRYLESSTLGCQIVELPYAGE-KLSMVVLLPN---EVDGLGKLESSLN-KE 250 Query: 507 VFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKENI 328 ++ + + E+V+V LP+F ++ L + L MG D+F P A+ I+ + Sbjct: 251 TLQEAMTSLRNSHPEEVEVTLPKFTLTQEFSLGETLKGMGASDLFSPGKADLSGISAAPL 310 Query: 327 FVSAIVHKA--DIEXXXXXXXXXXXXXXXXTDRISAPAFHANRPFVYFVMEKTTTTVIFS 154 VS +VHKA ++ P F+AN PF++ + T V+F Sbjct: 311 VVSEVVHKAFVEVNEEGTIAAAATGVGIMLMSMPMNPVFYANHPFLFLIRHNDTGAVLFM 370 Query: 153 G 151 G Sbjct: 371 G 371 >SB_55238| Best HMM Match : Serpin (HMM E-Value=0) Length = 345 Score = 77.4 bits (182), Expect = 1e-14 Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%) Frame = -2 Query: 687 VNMMYQKGQFPXSNLKKLKAFVXELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKD 508 V MM+QK +F + K K + ELPY D + SM+++LP +A ++ + D Sbjct: 159 VEMMFQKSKFKYLHSDKYKCKLLELPY-VDTQLSMVLVLPDETEGLARFEQDLTHDKMTD 217 Query: 507 VFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRIT--KE 334 +F + DV+V +P+F++++ LN+ L ++G+ +F A+F I+ E Sbjct: 218 IFNSVSSQRP----ADVEVYIPKFKMTSEFKLNEALQELGMKKMFDQAAADFTGISLPPE 273 Query: 333 NIFVSAIVHKADIEXXXXXXXXXXXXXXXXTDRISAP----AFHANRPFVYFVMEKTTTT 166 ++FVSA++HKA +E R + F A+ PF++ + + Sbjct: 274 HLFVSAVLHKAFVEVNEEGTEAAAATAAIMMMRCAIMREPLVFRADHPFLFLIQHCKSKC 333 Query: 165 VIFSGIYSKP 136 V+F G P Sbjct: 334 VLFMGRVMNP 343 >SB_55237| Best HMM Match : Serpin (HMM E-Value=0) Length = 363 Score = 70.1 bits (164), Expect = 2e-12 Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 3/188 (1%) Frame = -2 Query: 687 VNMMYQKGQFPXSNLKKLKAFVXELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKD 508 V MM +K + +K V ELPY D +M++ILP + I + K+ DV + + Sbjct: 166 VEMMTRKMKVNFYYDADIKCRVVELPYSGDDT-AMVIILPEEPSGIFSLEKSI-DVEIME 223 Query: 507 VFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRIT-KEN 331 +++L + V+V +P+F++S + L L D+GV DIF A+ I+ + Sbjct: 224 KWRRLMINTT------VEVSIPKFRLSQKLELRSLLQDLGVSDIFDSRKADLSGISAAKG 277 Query: 330 IFVSAIVHKADIEXXXXXXXXXXXXXXXXTDRI--SAPAFHANRPFVYFVMEKTTTTVIF 157 ++VS+ +HKA IE R F+A+ PF++ + K ++ ++F Sbjct: 278 LYVSSAIHKAHIEVNERGTVAAATTGVVMAKRSLDMNEVFYADHPFLFSIHHKPSSAILF 337 Query: 156 SGIYSKPT 133 G +PT Sbjct: 338 LGKVMQPT 345 >SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1149 Score = 31.1 bits (67), Expect = 1.0 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%) Frame = -2 Query: 516 LKDVFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPL---NDMGVYDIFQPDLANFQR 346 +KD + +++ D G+ + K TN+ +PL N+MG + F P L NFQ Sbjct: 113 IKDAYDDIRRHQSDRGVNNRKSKALIGNSETNLKCRQPLPDTNEMGDDEAFLPSLKNFQV 172 Query: 345 ITK-ENIFVSAIV 310 + N +++ +V Sbjct: 173 FLQWPNFYMNNVV 185 >SB_49709| Best HMM Match : UPAR_LY6 (HMM E-Value=1.8) Length = 437 Score = 29.1 bits (62), Expect = 4.2 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +2 Query: 215 WNAGAEILSVRVATVDAEATVPDSVTSISALCTMA--DTN 328 WN AEI S VAT +A T + TS C A DTN Sbjct: 295 WNNCAEIFSNLVATPEAPCTDQHTTTSFPTACRHATDDTN 334 >SB_22586| Best HMM Match : DUF287 (HMM E-Value=9.7) Length = 175 Score = 28.3 bits (60), Expect = 7.3 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = -2 Query: 546 DMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMG 388 D+ K AD + D++ VDD+G + K P +++ V PL+ MG Sbjct: 127 DLMKRIADSYISDLY------VDDYGRLRTNKKFPDITLNSQVFTFSPLSPMG 173 >SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) Length = 2128 Score = 28.3 bits (60), Expect = 7.3 Identities = 17/66 (25%), Positives = 28/66 (42%) Frame = -1 Query: 706 PXGNRQREHDVPERTVPVXKPKEA*GLRXGTSLRHRRKVLDAGHTPAPENEDRRHVQELR 527 P + RE + P +P++ R SLRH + D PE+ +RR + R Sbjct: 1579 PRQDFSREDAIQSHEGPKEEPRQGTERRREPSLRHDDRHEDRRSEGRPEDYERRDEERRR 1638 Query: 526 RCQSQG 509 + +G Sbjct: 1639 EAERKG 1644 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,141,693 Number of Sequences: 59808 Number of extensions: 372703 Number of successful extensions: 1011 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 934 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1005 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2095976575 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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