Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_M01
(772 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 77 1e-14
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 77 1e-14
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 70 2e-12
SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_49709| Best HMM Match : UPAR_LY6 (HMM E-Value=1.8) 29 4.2
SB_22586| Best HMM Match : DUF287 (HMM E-Value=9.7) 28 7.3
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 28 7.3
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 77.4 bits (182), Expect = 1e-14
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
Frame = -2
Query: 687 VNMMYQKGQFPXSNLKKLKAFVXELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKD 508
V MYQ +F L + ELPY + K SM+V+LP+ ++ + K + +N K+
Sbjct: 196 VQFMYQSSEFRYLESSTLGCQIVELPYAGE-KLSMVVLLPN---EVDGLGKLESSLN-KE 250
Query: 507 VFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKENI 328
++ + + E+V+V LP+F ++ L + L MG D+F P A+ I+ +
Sbjct: 251 TLQEAMTSLRNSHPEEVEVTLPKFTLTQEFSLGETLKGMGASDLFSPGKADLSGISAAPL 310
Query: 327 FVSAIVHKA--DIEXXXXXXXXXXXXXXXXTDRISAPAFHANRPFVYFVMEKTTTTVIFS 154
VS +VHKA ++ P F+AN PF++ + T V+F
Sbjct: 311 VVSEVVHKAFVEVNEEGTIAAAATGVGIMLMSMPMNPVFYANHPFLFLIRHNDTGAVLFM 370
Query: 153 G 151
G
Sbjct: 371 G 371
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 77.4 bits (182), Expect = 1e-14
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Frame = -2
Query: 687 VNMMYQKGQFPXSNLKKLKAFVXELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKD 508
V MM+QK +F + K K + ELPY D + SM+++LP +A ++ + D
Sbjct: 159 VEMMFQKSKFKYLHSDKYKCKLLELPY-VDTQLSMVLVLPDETEGLARFEQDLTHDKMTD 217
Query: 507 VFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRIT--KE 334
+F + DV+V +P+F++++ LN+ L ++G+ +F A+F I+ E
Sbjct: 218 IFNSVSSQRP----ADVEVYIPKFKMTSEFKLNEALQELGMKKMFDQAAADFTGISLPPE 273
Query: 333 NIFVSAIVHKADIEXXXXXXXXXXXXXXXXTDRISAP----AFHANRPFVYFVMEKTTTT 166
++FVSA++HKA +E R + F A+ PF++ + +
Sbjct: 274 HLFVSAVLHKAFVEVNEEGTEAAAATAAIMMMRCAIMREPLVFRADHPFLFLIQHCKSKC 333
Query: 165 VIFSGIYSKP 136
V+F G P
Sbjct: 334 VLFMGRVMNP 343
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 70.1 bits (164), Expect = 2e-12
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 3/188 (1%)
Frame = -2
Query: 687 VNMMYQKGQFPXSNLKKLKAFVXELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKD 508
V MM +K + +K V ELPY D +M++ILP + I + K+ DV + +
Sbjct: 166 VEMMTRKMKVNFYYDADIKCRVVELPYSGDDT-AMVIILPEEPSGIFSLEKSI-DVEIME 223
Query: 507 VFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRIT-KEN 331
+++L + V+V +P+F++S + L L D+GV DIF A+ I+ +
Sbjct: 224 KWRRLMINTT------VEVSIPKFRLSQKLELRSLLQDLGVSDIFDSRKADLSGISAAKG 277
Query: 330 IFVSAIVHKADIEXXXXXXXXXXXXXXXXTDRI--SAPAFHANRPFVYFVMEKTTTTVIF 157
++VS+ +HKA IE R F+A+ PF++ + K ++ ++F
Sbjct: 278 LYVSSAIHKAHIEVNERGTVAAATTGVVMAKRSLDMNEVFYADHPFLFSIHHKPSSAILF 337
Query: 156 SGIYSKPT 133
G +PT
Sbjct: 338 LGKVMQPT 345
>SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -2
Query: 516 LKDVFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPL---NDMGVYDIFQPDLANFQR 346
+KD + +++ D G+ + K TN+ +PL N+MG + F P L NFQ
Sbjct: 113 IKDAYDDIRRHQSDRGVNNRKSKALIGNSETNLKCRQPLPDTNEMGDDEAFLPSLKNFQV 172
Query: 345 ITK-ENIFVSAIV 310
+ N +++ +V
Sbjct: 173 FLQWPNFYMNNVV 185
>SB_49709| Best HMM Match : UPAR_LY6 (HMM E-Value=1.8)
Length = 437
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 215 WNAGAEILSVRVATVDAEATVPDSVTSISALCTMA--DTN 328
WN AEI S VAT +A T + TS C A DTN
Sbjct: 295 WNNCAEIFSNLVATPEAPCTDQHTTTSFPTACRHATDDTN 334
>SB_22586| Best HMM Match : DUF287 (HMM E-Value=9.7)
Length = 175
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 546 DMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMG 388
D+ K AD + D++ VDD+G + K P +++ V PL+ MG
Sbjct: 127 DLMKRIADSYISDLY------VDDYGRLRTNKKFPDITLNSQVFTFSPLSPMG 173
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = -1
Query: 706 PXGNRQREHDVPERTVPVXKPKEA*GLRXGTSLRHRRKVLDAGHTPAPENEDRRHVQELR 527
P + RE + P +P++ R SLRH + D PE+ +RR + R
Sbjct: 1579 PRQDFSREDAIQSHEGPKEEPRQGTERRREPSLRHDDRHEDRRSEGRPEDYERRDEERRR 1638
Query: 526 RCQSQG 509
+ +G
Sbjct: 1639 EAERKG 1644
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,141,693
Number of Sequences: 59808
Number of extensions: 372703
Number of successful extensions: 1011
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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