BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_M01 (772 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 38 0.006 At5g39380.1 68418.m04771 calmodulin-binding protein-related has ... 30 1.9 At3g18730.1 68416.m02378 tetratricopeptide repeat (TPR)-containi... 29 4.5 At1g62170.1 68414.m07013 serpin family protein / serine protease... 28 5.9 At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 28 7.9 >At3g45220.1 68416.m04880 serpin, putative / serine protease inhibitor, putative similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor) Length = 393 Score = 38.3 bits (85), Expect = 0.006 Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 11/177 (6%) Frame = -2 Query: 624 VXELPYGTDGK-YSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVK 448 V LPY D + ++M + LP+ R + + + +++ K F L + + K Sbjct: 222 VLRLPYVEDQRQFAMYIYLPNDRDGLPTLLE---EISSKPRF--LDNHIPRQRILTEAFK 276 Query: 447 LPRFQISTNVVLNKPLNDMGVYDIFQ----PDLANFQRITK-----ENIFVSAIVHKADI 295 +P+F+ S + L +MG+ F ++ I + EN+FVS + HKA I Sbjct: 277 IPKFKFSFEFKASDVLKEMGLTLPFTHGSLTEMVESPSIPENLCVAENLFVSNVFHKACI 336 Query: 294 E-XXXXXXXXXXXXXXXXTDRISAPAFHANRPFVYFVMEKTTTTVIFSGIYSKPTVY 127 E D + F A+ PF++ V E+ + ++F G P+++ Sbjct: 337 EVDEEGTEAAAVSVASMTKDMLLMGDFVADHPFLFTVREEKSGVILFMGQVLDPSIH 393 >At5g39380.1 68418.m04771 calmodulin-binding protein-related has weak similarity to calmodulin-binding proteins Length = 507 Score = 29.9 bits (64), Expect = 1.9 Identities = 14/56 (25%), Positives = 26/56 (46%) Frame = -2 Query: 498 QLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKEN 331 + K +DD+ +E+ + + + + NVV N G + F P L Q K++ Sbjct: 289 EFNKQLDDYPVEEKTLHVVEMETTNNVVSENDQNQQGFVEPFLPPLPPTQSTPKDD 344 >At3g18730.1 68416.m02378 tetratricopeptide repeat (TPR)-containing protein contains Pfam profile PF00515: TPR Domain Length = 1311 Score = 28.7 bits (61), Expect = 4.5 Identities = 21/76 (27%), Positives = 35/76 (46%) Frame = +2 Query: 182 SITK*TKGLFAWNAGAEILSVRVATVDAEATVPDSVTSISALCTMADTNIFSFVIRWKLA 361 +I K + L++ N E S+ T+ A DS + +S LC + + I+ LA Sbjct: 946 TIVKNCRALYSLNV--EHCSLTSRTIQKVANALDSKSGLSQLCIGYNNPVSGSSIQNLLA 1003 Query: 362 KSGWNMSYTPMSFNGL 409 K S+ +S NG+ Sbjct: 1004 KLATLSSFAELSMNGI 1019 >At1g62170.1 68414.m07013 serpin family protein / serine protease inhibitor family protein similar to phloem serpin-1 GI:9937311 from [Cucurbita maxima]; contains Pfam profile PF00079: Serpin (serine protease inhibitor) Length = 433 Score = 28.3 bits (60), Expect = 5.9 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = -2 Query: 219 FHANRPFVYFVMEKTTTTVIFSGIYSKPT 133 F A+ PF++ + E+ T TV+F+G P+ Sbjct: 404 FVADHPFLFLIREEQTGTVLFAGQIFDPS 432 >At1g72410.1 68414.m08374 COP1-interacting protein-related similar to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis thaliana] GI:3327870 Length = 1163 Score = 27.9 bits (59), Expect = 7.9 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = -1 Query: 700 GNRQREHDVPERTVPVXKPKEA*GLRXGTSLRHRRKVLDAGHTPAPENEDRRHVQELRRC 521 G+ + D E + V + + G+ TS R V+D + A +N+ RHV L+ Sbjct: 383 GDEEASRDRVESSKTVTETRLVSGVE-ATSYVQSRSVIDPNVSSASQNQTERHVDRLQNV 441 Query: 520 QS 515 S Sbjct: 442 MS 443 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,332,096 Number of Sequences: 28952 Number of extensions: 256080 Number of successful extensions: 671 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 664 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 671 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1716774400 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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