Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_L24
(868 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 282 2e-76
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 282 2e-76
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 282 2e-76
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 282 2e-76
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 282 2e-76
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 282 2e-76
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 282 2e-76
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 280 1e-75
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 277 1e-74
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 271 4e-73
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 264 5e-71
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 253 1e-67
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 253 2e-67
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 231 6e-61
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 177 7e-45
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 108 5e-24
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 93 4e-19
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 93 4e-19
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 1e-18
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 89 6e-18
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 81 9e-16
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 67 2e-11
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 67 2e-11
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 62 4e-10
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 60 2e-09
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.024
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 34 0.17
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_50744| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_50741| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.8
SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 28 8.6
SB_410| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 282 bits (692), Expect = 2e-76
Identities = 129/133 (96%), Positives = 130/133 (97%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 244 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 303
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 304 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 363
Query: 181 ALEKDYEEVGMDS 143
ALEKDYEEVG+DS
Sbjct: 364 ALEKDYEEVGVDS 376
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 282 bits (692), Expect = 2e-76
Identities = 129/133 (96%), Positives = 130/133 (97%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 366
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 367 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 426
Query: 181 ALEKDYEEVGMDS 143
ALEKDYEEVG+DS
Sbjct: 427 ALEKDYEEVGVDS 439
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 282 bits (692), Expect = 2e-76
Identities = 129/133 (96%), Positives = 130/133 (97%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 272 PRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 331
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 332 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 391
Query: 181 ALEKDYEEVGMDS 143
ALEKDYEEVG+DS
Sbjct: 392 ALEKDYEEVGVDS 404
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 282 bits (692), Expect = 2e-76
Identities = 129/133 (96%), Positives = 130/133 (97%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 740 PRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 799
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 800 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 859
Query: 181 ALEKDYEEVGMDS 143
ALEKDYEEVG+DS
Sbjct: 860 ALEKDYEEVGVDS 872
Score = 273 bits (670), Expect = 1e-73
Identities = 124/128 (96%), Positives = 125/128 (97%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 366
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCMLSNTTA+AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 367 DLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 426
Query: 181 ALEKDYEE 158
ALEKDYEE
Sbjct: 427 ALEKDYEE 434
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 282 bits (692), Expect = 2e-76
Identities = 129/133 (96%), Positives = 130/133 (97%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 892 PRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 951
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 952 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 1011
Query: 181 ALEKDYEEVGMDS 143
ALEKDYEEVG+DS
Sbjct: 1012 ALEKDYEEVGVDS 1024
Score = 139 bits (337), Expect = 2e-33
Identities = 61/65 (93%), Positives = 62/65 (95%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 371 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 430
Query: 361 DLAKV 347
DLAK+
Sbjct: 431 DLAKI 435
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 282 bits (692), Expect = 2e-76
Identities = 129/133 (96%), Positives = 130/133 (97%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 232 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 291
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 292 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 351
Query: 181 ALEKDYEEVGMDS 143
ALEKDYEEVG+DS
Sbjct: 352 ALEKDYEEVGVDS 364
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 282 bits (692), Expect = 2e-76
Identities = 129/133 (96%), Positives = 130/133 (97%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 105 PRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 164
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 165 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 224
Query: 181 ALEKDYEEVGMDS 143
ALEKDYEEVG+DS
Sbjct: 225 ALEKDYEEVGVDS 237
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 280 bits (686), Expect = 1e-75
Identities = 127/133 (95%), Positives = 130/133 (97%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVN++IATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLLYRGDVVPKDVNSSIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 366
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 367 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 426
Query: 181 ALEKDYEEVGMDS 143
ALEKDYEEVG+DS
Sbjct: 427 ALEKDYEEVGVDS 439
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 277 bits (678), Expect = 1e-74
Identities = 126/133 (94%), Positives = 129/133 (96%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C +RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 723 PRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 782
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 783 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 842
Query: 181 ALEKDYEEVGMDS 143
ALEKDYEEV ++S
Sbjct: 843 ALEKDYEEVAVES 855
Score = 272 bits (667), Expect = 2e-73
Identities = 124/128 (96%), Positives = 125/128 (97%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C +RGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 292 PRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 351
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 352 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 411
Query: 181 ALEKDYEE 158
ALEKDYEE
Sbjct: 412 ALEKDYEE 419
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 271 bits (665), Expect = 4e-73
Identities = 123/128 (96%), Positives = 125/128 (97%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVN+AIATIKTK+TIQFVDWCPTGFKVGINYQPPTVVPGG
Sbjct: 678 PRHGKYMACCLLYRGDVVPKDVNSAIATIKTKKTIQFVDWCPTGFKVGINYQPPTVVPGG 737
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 738 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 797
Query: 181 ALEKDYEE 158
ALEKDYEE
Sbjct: 798 ALEKDYEE 805
Score = 243 bits (595), Expect = 1e-64
Identities = 112/113 (99%), Positives = 113/113 (100%)
Frame = -1
Query: 481 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 302
DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE
Sbjct: 1107 DVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 1166
Query: 301 AWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 143
AWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 1167 AWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 1219
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 264 bits (648), Expect = 5e-71
Identities = 120/128 (93%), Positives = 123/128 (96%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQ PT VPGG
Sbjct: 105 PRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQQPTAVPGG 164
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQR+VCMLSNTTAIA+AWARL+HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 165 DLAKVQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 224
Query: 181 ALEKDYEE 158
ALEKDYEE
Sbjct: 225 ALEKDYEE 232
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 253 bits (620), Expect = 1e-67
Identities = 119/128 (92%), Positives = 122/128 (95%)
Frame = -1
Query: 526 YMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV 347
++A C GDVV KDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV
Sbjct: 297 WLAVCYS-EGDVVLKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV 355
Query: 346 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 167
QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD
Sbjct: 356 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 415
Query: 166 YEEVGMDS 143
YEEVG+DS
Sbjct: 416 YEEVGVDS 423
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 253 bits (619), Expect = 2e-67
Identities = 125/154 (81%), Positives = 127/154 (82%), Gaps = 21/154 (13%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK-------------- 404
PR+GKYMA C YRGDVVPKDVN+AIA IK KRTIQFVDWCPTGFK
Sbjct: 438 PRYGKYMACCLLYRGDVVPKDVNSAIAAIKMKRTIQFVDWCPTGFKCHPNISDKQKKSTK 497
Query: 403 -------VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 245
VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV
Sbjct: 498 TFYSGTQVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFV 557
Query: 244 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 143
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG DS
Sbjct: 558 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS 591
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 231 bits (565), Expect = 6e-61
Identities = 111/133 (83%), Positives = 113/133 (84%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAAIATI+ KRT QF DWCPTGFKVGIN QPPTVVPGG
Sbjct: 232 PRHGKYMACCLLYRGDVVPKDVNAAIATIRPKRTFQFGDWCPTGFKVGINSQPPTVVPGG 291
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAK IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 292 DLAK------------PIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 339
Query: 181 ALEKDYEEVGMDS 143
ALEKDYEEVG+DS
Sbjct: 340 ALEKDYEEVGVDS 352
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 177 bits (432), Expect = 7e-45
Identities = 81/87 (93%), Positives = 85/87 (97%)
Frame = -1
Query: 403 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 224
VGINYQ PT VPGGDLAKVQR+VCMLSNTTAIA+AWARL+HKFDLMYAKRAFVHWYVGEG
Sbjct: 51 VGINYQQPTAVPGGDLAKVQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEG 110
Query: 223 MEEGEFSEAREDLAALEKDYEEVGMDS 143
MEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 111 MEEGEFSEAREDLAALEKDYEEVGVDS 137
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 108 bits (260), Expect = 5e-24
Identities = 47/54 (87%), Positives = 49/54 (90%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 380
PRHGKYMA C YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI ++ P
Sbjct: 306 PRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGIRHKAP 359
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 92.7 bits (220), Expect = 4e-19
Identities = 41/128 (32%), Positives = 72/128 (56%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHG+Y+ +RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 305 PRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR----- 359
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 360 ---GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 416
Query: 181 ALEKDYEE 158
L +Y++
Sbjct: 417 DLVSEYQQ 424
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 92.7 bits (220), Expect = 4e-19
Identities = 41/128 (32%), Positives = 72/128 (56%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHG+Y+ +RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 305 PRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR----- 359
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 360 ---GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 416
Query: 181 ALEKDYEE 158
L +Y++
Sbjct: 417 DLVSEYQQ 424
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 91.1 bits (216), Expect = 1e-18
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -1
Query: 277 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 143
+D YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 9 YDHDYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 53
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 88.6 bits (210), Expect = 6e-18
Identities = 39/128 (30%), Positives = 71/128 (55%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
P HG+Y+ +RG + K+++ + ++ K + FV+W P K + PP
Sbjct: 250 PLHGRYLTVAAMFRGRMSMKELDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPR----- 304
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 305 ---GLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 361
Query: 181 ALEKDYEE 158
L +Y++
Sbjct: 362 DLVSEYQQ 369
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 81.4 bits (192), Expect = 9e-16
Identities = 46/128 (35%), Positives = 68/128 (53%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
P+ GKY+ YRG + K+V +A + + + FVDW P KV + PP
Sbjct: 210 PKRGKYLTYAAMYRGLMSMKEVEDQMAFAQDRYSSLFVDWIPNNGKVAVCDVPPH----- 264
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
D+ A C+ SNT AI E + R+ + LM+ +RAF+HWY EGM+ +F EA D+
Sbjct: 265 DMK--MSASCISSNT-AIQELFKRIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDIL 321
Query: 181 ALEKDYEE 158
L Y++
Sbjct: 322 DLISTYQQ 329
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 67.3 bits (157), Expect = 2e-11
Identities = 34/107 (31%), Positives = 58/107 (54%)
Frame = -1
Query: 478 VNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 299
V+ + + K + FV+W P K + + P G ++ A + N TAI E
Sbjct: 91 VDEQMLNTQNKNSPFFVEWIPNNVKTTVC----DIAPKG----LKMAATFVGNNTAIQEL 142
Query: 298 WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 158
+ R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 143 FKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 189
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 67.3 bits (157), Expect = 2e-11
Identities = 34/107 (31%), Positives = 58/107 (54%)
Frame = -1
Query: 478 VNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 299
V+ + + K + FV+W P K + + P G ++ A + N TAI E
Sbjct: 153 VDEQMLNTQNKNSPFFVEWIPNNVKTTVC----DIAPKG----LKMAATFVGNNTAIQEL 204
Query: 298 WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 158
+ R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 205 FKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 251
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 62.5 bits (145), Expect = 4e-10
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = -1
Query: 547 ATPRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 368
A P+H Y+A RG+V D+ I +K +++F+ W G+K G+ PP P
Sbjct: 352 ADPKHNLYLACALILRGNVEVSDIRRNIERLKP--SLKFIHWNQEGWKTGLCSVPPVGQP 409
Query: 367 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG-EGMEEGEFSEARE 191
++ L+N + I + L +F +Y ++A VH Y +G+E G+F + E
Sbjct: 410 --------YSLLTLANNSCIKNTFVELKDRFMKLYKRKAHVHHYTHVDGLEVGQFDDGLE 461
Query: 190 DLAALEKDY 164
L+ L ++Y
Sbjct: 462 SLSWLIQEY 470
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 60.5 bits (140), Expect = 2e-09
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = -1
Query: 433 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 254
FV+W P K + PP ++ A L N+TAI EA+ R +F M+ +R
Sbjct: 160 FVEWIPNNMKTAVCDVPPV--------GLKNAATFLYNSTAIQEAFRRFTEQFAAMFRRR 211
Query: 253 AFVHWYVGEGMEEGEFSEARED 188
AF+HWY EGM+ EF+E + +
Sbjct: 212 AFLHWYTTEGMDPLEFTEIKRN 233
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 36.7 bits (81), Expect = 0.024
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDV 491
PRHGKYMA C YRGDV
Sbjct: 1218 PRHGKYMACCMLYRGDV 1234
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = -1
Query: 346 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 167
+++V +LSN+ +++ K M+A RA+VH Y+ G+ E F ++ L + K+
Sbjct: 411 EKSVTLLSNSQTHVGPLSKVVGKAWTMFASRAYVHQYLRFGISEDAFVDSFACLEQVVKN 470
Query: 166 Y 164
Y
Sbjct: 471 Y 471
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 32.3 bits (70), Expect = 0.53
Identities = 40/156 (25%), Positives = 49/156 (31%), Gaps = 2/156 (1%)
Frame = -2
Query: 570 PXQPDGEMRP--PVMASTWLXVXCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSV 397
P P P P+ ST CT T P + PS PS P S ST P + S
Sbjct: 39 PCTPSTPSTPSTPITPST-PSTPCTHST--PSAPSTPSTPSTPCTPSTPSTPSTPSTPST 95
Query: 396 STTSHPPWCPEATWPRFNVXXXXXXXXXXXPKLGLALTTSSTSCTPSVLSCTGTSVRVWR 217
+T P P P +T ST TPS S T
Sbjct: 96 PSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPST 155
Query: 216 RESSPKPVRTWLPSRRITKKSAWTPLKARVREPKST 109
+ P+ PS T + TP+ ST
Sbjct: 156 PSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPST 191
Score = 31.1 bits (67), Expect = 1.2
Identities = 32/128 (25%), Positives = 40/128 (31%)
Frame = -2
Query: 492 SYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVXXXXXXXXX 313
S P + PS PS PS S ST P + S +T P P
Sbjct: 124 STPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITP 183
Query: 312 XXPKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKA 133
+T ST TPS S T + + P PS T + TP+
Sbjct: 184 STLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPITP 243
Query: 132 RVREPKST 109
ST
Sbjct: 244 STPSTPST 251
Score = 29.1 bits (62), Expect = 4.9
Identities = 33/122 (27%), Positives = 46/122 (37%), Gaps = 5/122 (4%)
Frame = -2
Query: 492 SYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVXXXXXXXXX 313
S P + PS PS PS S T P + + +T+ A F
Sbjct: 304 STPSAPSTPSTPSTPSTPSTPKTPSTPCTPNTPSTNRKKIFISALEFAFETWSMERVHFL 363
Query: 312 XXP--KLGLALTTSSTSCTPSVLS--CTGTSVRVWRRESSP-KPVRTWLPSRRITKKSAW 148
+ + +T ST CTPS S T ++ R S+P P PS IT ++
Sbjct: 364 KIDIDLVDIITSTPSTPCTPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPRTPS 423
Query: 147 TP 142
TP
Sbjct: 424 TP 425
>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +1
Query: 130 PRLQRSPCRLLRNPSRGQPGPHGLR---RTLPPPYPHRRTSARKH 255
PR QR +P+ P L R+ PPPYP RTS H
Sbjct: 737 PRQQRMMTTTAHSPTAQSPSADSLGSSVRSPPPPYPGSRTSGNPH 781
>SB_50744| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 347 NLGQVASGHHGGWLVVDTDLETGWTPVDELDSTLGFDGSD 466
N+ V + GW VD D E GW P L+ DGSD
Sbjct: 158 NVVDVIQKNEHGWWFVDLDGELGWVPASYLEPR---DGSD 194
>SB_50741| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 380 GWLVVDTDLETGWTPVDELDSTLGFDGSD 466
GW VD D+E GW P L+ G G D
Sbjct: 38 GWCFVDVDVELGWVPASYLEPRDG-SGDD 65
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = +2
Query: 152 ADFFVILLEGSQVLTGFGELSLLHTLTDVPVHESTLGVHEVELVVKASPSFXXXXXXXXX 331
+D+ + S ++G+G+ L +HE+T+ + +++ KA P +
Sbjct: 236 SDYAQLQANVSGTISGWGKRKLWRDRVANRLHEATVPIVDIQTCRKAHPDYIVTANMFCA 295
Query: 332 XXXTLNLGQVASGHHGGWLVVDTDL 406
+ G G GG VD L
Sbjct: 296 GFENSSRGDACQGDSGGPFSVDNPL 320
>SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 91 KIFHWLSTLRLPHP-RLQRSPCRLLRNPSRGQPGPH 195
K+FH + L P RL+R +++R + G P PH
Sbjct: 154 KLFHAVVVLEFPKSQRLERGQSQVIRCSAEGYPTPH 189
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 169 PSRGQPGPHGLRRTLPPPYPHRRTSA 246
PSRG P P R + PPP P R +A
Sbjct: 300 PSRGAPPPPPSRGSAPPPPPARMGTA 325
>SB_410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 479 CERGHRYHQNQAYYPIRRLVSNRFQGRYQLPA 384
C+ H HQ+Q +P+R LV + QG PA
Sbjct: 2 CQCCHSNHQDQENHPVRPLVPHWIQGINYQPA 33
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,774,414
Number of Sequences: 59808
Number of extensions: 426014
Number of successful extensions: 1472
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2479240863
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -