Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_L24
(868 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 263 1e-70
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 263 1e-70
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 262 2e-70
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 262 2e-70
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 262 2e-70
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 256 1e-68
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 161 5e-40
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 96 2e-20
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 94 9e-20
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 94 1e-19
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 94 1e-19
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 94 1e-19
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 94 1e-19
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 92 5e-19
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 91 7e-19
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 91 7e-19
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 52 7e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 49 5e-06
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.33
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.7
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 5.3
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 7.0
At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase... 28 7.0
At3g26855.1 68416.m03360 hypothetical protein 28 9.3
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 263 bits (644), Expect = 1e-70
Identities = 116/132 (87%), Positives = 124/132 (93%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGG 366
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 367 DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 426
Query: 181 ALEKDYEEVGMD 146
ALEKDYEEVG +
Sbjct: 427 ALEKDYEEVGAE 438
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 263 bits (644), Expect = 1e-70
Identities = 116/132 (87%), Positives = 124/132 (93%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGG 366
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 367 DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 426
Query: 181 ALEKDYEEVGMD 146
ALEKDYEEVG +
Sbjct: 427 ALEKDYEEVGAE 438
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 262 bits (643), Expect = 2e-70
Identities = 116/132 (87%), Positives = 125/132 (94%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGG 366
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 367 DLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 426
Query: 181 ALEKDYEEVGMD 146
ALEKDYEEVG +
Sbjct: 427 ALEKDYEEVGAE 438
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 262 bits (643), Expect = 2e-70
Identities = 116/132 (87%), Positives = 125/132 (94%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGG 366
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 367 DLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 426
Query: 181 ALEKDYEEVGMD 146
ALEKDYEEVG +
Sbjct: 427 ALEKDYEEVGAE 438
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 262 bits (643), Expect = 2e-70
Identities = 116/132 (87%), Positives = 125/132 (94%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGG 366
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCM+SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 367 DLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 426
Query: 181 ALEKDYEEVGMD 146
ALEKDYEEVG +
Sbjct: 427 ALEKDYEEVGAE 438
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 256 bits (627), Expect = 1e-68
Identities = 113/130 (86%), Positives = 121/130 (93%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVN A+A IK KRTIQFVDWCPTGFK GINYQPP+VVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGG 366
Query: 361 DLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 182
DLAKVQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLA
Sbjct: 367 DLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLA 426
Query: 181 ALEKDYEEVG 152
ALEKDYEEVG
Sbjct: 427 ALEKDYEEVG 436
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 161 bits (391), Expect = 5e-40
Identities = 70/80 (87%), Positives = 75/80 (93%)
Frame = -1
Query: 541 PRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGG 362
PRHGKYMA C YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGG
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGG 366
Query: 361 DLAKVQRAVCMLSNTTAIAE 302
DLAKVQRAVCM+SN+T++AE
Sbjct: 367 DLAKVQRAVCMISNSTSVAE 386
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/130 (33%), Positives = 74/130 (56%)
Frame = -1
Query: 547 ATPRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 368
A PRHG+Y+ +RG + K+V+ I ++ K + FV+W P K + PPT
Sbjct: 304 ADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT--- 360
Query: 367 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 188
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 361 -----GIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 415
Query: 187 LAALEKDYEE 158
+ L +Y++
Sbjct: 416 MNDLVSEYQQ 425
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 94.3 bits (224), Expect = 9e-20
Identities = 44/130 (33%), Positives = 73/130 (56%)
Frame = -1
Query: 547 ATPRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 368
A PRHG+Y+ +RG + K+V+ I I+ K + FV+W P K + PP
Sbjct: 304 ADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPPK--- 360
Query: 367 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 188
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 361 -----GLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 415
Query: 187 LAALEKDYEE 158
+ L +Y++
Sbjct: 416 MNDLVAEYQQ 425
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/130 (33%), Positives = 74/130 (56%)
Frame = -1
Query: 547 ATPRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 368
A PRHG+Y+ +RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 303 ADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--- 359
Query: 367 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 188
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 360 -----GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 187 LAALEKDYEE 158
+ L +Y++
Sbjct: 415 MNDLVSEYQQ 424
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/130 (33%), Positives = 74/130 (56%)
Frame = -1
Query: 547 ATPRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 368
A PRHG+Y+ +RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 303 ADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--- 359
Query: 367 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 188
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 360 -----GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 187 LAALEKDYEE 158
+ L +Y++
Sbjct: 415 MNDLVSEYQQ 424
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/130 (33%), Positives = 74/130 (56%)
Frame = -1
Query: 547 ATPRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 368
A PRHG+Y+ +RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 303 ADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--- 359
Query: 367 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 188
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 360 -----GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 187 LAALEKDYEE 158
+ L +Y++
Sbjct: 415 MNDLVSEYQQ 424
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/130 (33%), Positives = 74/130 (56%)
Frame = -1
Query: 547 ATPRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 368
A PRHG+Y+ +RG + K+V+ + ++ K + FV+W P K + PPT
Sbjct: 303 ADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--- 359
Query: 367 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 188
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 360 -----GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 187 LAALEKDYEE 158
+ L +Y++
Sbjct: 415 MNDLVSEYQQ 424
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 91.9 bits (218), Expect = 5e-19
Identities = 43/130 (33%), Positives = 74/130 (56%)
Frame = -1
Query: 547 ATPRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 368
A PRHG+Y+ +RG + K+V+ + I+ K + FV+W P K + + P
Sbjct: 303 ADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSVC----DIAP 358
Query: 367 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 188
G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 359 KG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 187 LAALEKDYEE 158
+ L +Y++
Sbjct: 415 MNDLVAEYQQ 424
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 91.5 bits (217), Expect = 7e-19
Identities = 42/130 (32%), Positives = 73/130 (56%)
Frame = -1
Query: 547 ATPRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 368
A PRHG+Y+ +RG + K+V+ + ++ K + FV+W P K + + P
Sbjct: 303 ADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC----DIAP 358
Query: 367 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 188
G + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 359 RG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 187 LAALEKDYEE 158
+ L +Y++
Sbjct: 415 MNDLVSEYQQ 424
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 91.5 bits (217), Expect = 7e-19
Identities = 42/130 (32%), Positives = 74/130 (56%)
Frame = -1
Query: 547 ATPRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVP 368
A PRHG+Y+ +RG + K+V+ + ++ K + FV+W P K + + P
Sbjct: 303 ADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVC----DIAP 358
Query: 367 GGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 188
G ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +
Sbjct: 359 TG----LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
Query: 187 LAALEKDYEE 158
+ L +Y++
Sbjct: 415 MNDLVAEYQQ 424
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 51.6 bits (118), Expect = 7e-07
Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Frame = -1
Query: 550 NATPRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 371
N KY++ +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V
Sbjct: 311 NKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQ 370
Query: 370 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFS 203
++ + ML++ T+I ++R ++D + K+AF+ Y M + EF
Sbjct: 371 TSHRVSGL-----MLASHTSIRHLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFD 425
Query: 202 EAREDLAALEKDYE 161
E+R+ + +L +Y+
Sbjct: 426 ESRDIIESLVDEYK 439
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 48.8 bits (111), Expect = 5e-06
Identities = 30/134 (22%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Frame = -1
Query: 550 NATPRHGKYMAXCXXYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 371
N KY++ +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V
Sbjct: 311 NKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQ 370
Query: 370 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFS 203
++ + ML++ T+I +++ ++D + K+AF+ Y M + EF
Sbjct: 371 TAHRVSGL-----MLASHTSIRHLFSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFD 425
Query: 202 EAREDLAALEKDYE 161
E+R+ + +L +Y+
Sbjct: 426 ESRDIIESLVDEYK 439
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 291 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 184
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 386 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 490
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 163 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 279
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -1
Query: 502 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 359
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At1g51660.1 68414.m05820 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK4) identical to MAP kinase kinase
4 [Arabidopsis thaliana] gi|3219271|dbj|BAA28830
gi_13265419
Length = 366
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +1
Query: 76 ASAP*KIFHWLSTLRLPHPRLQRSPCRLLRNPS--RGQPG----PHGLRRTLPPPYPHRR 237
A+A + H++S P +RS +LL++P R P P L + LPPP P
Sbjct: 301 ATASPEFRHFISCCLQREPGKRRSAMQLLQHPFILRASPSQNRSPQNLHQLLPPPRPLSS 360
Query: 238 TSA 246
+S+
Sbjct: 361 SSS 363
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 270 SCTPSVLSCTGTSVRVWRRESSPK 199
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,371,816
Number of Sequences: 28952
Number of extensions: 292674
Number of successful extensions: 1042
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2028915200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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