BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_L22 (842 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 33 0.067 SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 32 0.089 SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 31 0.27 SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces pomb... 30 0.47 SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 29 0.62 SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 29 0.62 SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 29 1.1 SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 28 1.4 SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 28 1.4 SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 28 1.4 SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 27 2.5 SPAC8F11.04 |||U3 snoRNP-associated protein Cic1/Utp30 family |S... 27 2.5 SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 27 3.3 SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 27 3.3 SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 27 3.3 SPAC1002.04c |taf11||transcription factor TFIID complex subunit ... 27 3.3 SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 3.3 SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 27 4.4 SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 27 4.4 SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 27 4.4 SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 27 4.4 SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 5.8 SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 26 5.8 SPAC6G10.07 |||nuclear cap-binding complex large subunit |Schizo... 26 7.7 SPAC1F8.05 |isp3|meu4|sequence orphan|Schizosaccharomyces pombe|... 26 7.7 SPBC216.06c |swi1||replication fork protection complex subunit S... 26 7.7 SPBC20F10.03 |||conserved eukaryotic protein|Schizosaccharomyces... 26 7.7 SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 26 7.7 >SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1562 Score = 32.7 bits (71), Expect = 0.067 Identities = 16/66 (24%), Positives = 29/66 (43%) Frame = -3 Query: 567 HRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKD 388 HR + + + + ND +++ +DE ++ E + +A EDKL V + Sbjct: 1028 HRFIDESEYQSWKLVNDAALNSLSNRQQLLDEAADLIEKDLEFAGATAIEDKLQVGVPES 1087 Query: 387 IGELLR 370 I L R Sbjct: 1088 INSLFR 1093 >SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces pombe|chr 2|||Manual Length = 1428 Score = 32.3 bits (70), Expect = 0.089 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = -3 Query: 552 QQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNMSANED 415 QQK + E ++ G +E ++ D+ K DN +E+++MS + D Sbjct: 363 QQKLENERIVEEIKKNGIQEDSQSTDDSSKDDDNNSESNDMSPHND 408 >SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 597 Score = 30.7 bits (66), Expect = 0.27 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = -1 Query: 392 KTLENFFEKWTHQGNEG-TDDEEDLDRYEKFRKTDTKKAKNIESENNESIVLNSSGEKKS 216 KT+E EK + G ++DEED+D +E + + K+I ++ I L K Sbjct: 310 KTIE-LHEKIASASDIGASEDEEDVDMHESISDNENEGIKDIPVAEDDDITLKFRAAKSK 368 Query: 215 VEVN 204 + N Sbjct: 369 INTN 372 Score = 27.9 bits (59), Expect = 1.9 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -1 Query: 338 DDEEDLDRYEKFRKTDTKKAKNIESENNE 252 +D++DLD YE K +K AK + EN++ Sbjct: 476 EDQDDLDYYESLDK-KSKMAKKLRKENHD 503 >SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces pombe|chr 3|||Manual Length = 202 Score = 29.9 bits (64), Expect = 0.47 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Frame = -3 Query: 552 QQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDI-GEL 376 ++++ +E A +++KG + E + + K D E +AN K W ++ KDI E Sbjct: 101 RKREQYDELAKPIMSKGLRSRTEQQESIGKLQDAIRELEEENANYVKAW-NLRKDIFDET 159 Query: 375 LREVD 361 L++++ Sbjct: 160 LKQMN 164 >SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 506 Score = 29.5 bits (63), Expect = 0.62 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -3 Query: 561 QLHQQKQDVEESANDVVAKGKEEKEETIDEV 469 QL Q + + SAN+ G E+KE ++DE+ Sbjct: 476 QLKQSLLNTQNSANENAVNGMEDKESSVDEL 506 >SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1183 Score = 29.5 bits (63), Expect = 0.62 Identities = 11/28 (39%), Positives = 22/28 (78%) Frame = -3 Query: 579 AERIHRQLHQQKQDVEESANDVVAKGKE 496 A+R+ R+L +++DVE +A+D+ KG++ Sbjct: 352 AQRMPRKLKMREEDVEPTADDIEIKGRK 379 >SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces pombe|chr 1|||Manual Length = 855 Score = 28.7 bits (61), Expect = 1.1 Identities = 17/64 (26%), Positives = 31/64 (48%) Frame = -3 Query: 588 RKHAERIHRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNMSANEDKL 409 ++H H++ Q + E + ND + KG E +EE + +K + +N+ NE Sbjct: 668 KRHFSLRHKKNASQITNNENNGNDDIKKGDEPEEEHVG--LRKNSTQEKNANLDPNEALK 725 Query: 408 WADV 397 AD+ Sbjct: 726 RADM 729 >SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr 2|||Manual Length = 463 Score = 28.3 bits (60), Expect = 1.4 Identities = 12/37 (32%), Positives = 23/37 (62%) Frame = -1 Query: 329 EDLDRYEKFRKTDTKKAKNIESENNESIVLNSSGEKK 219 E+L++Y+K +K K KN+E++ ++ SS + K Sbjct: 333 EELEKYKKSKKVVLGKRKNLENDEESTLRALSSFQSK 369 >SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosaccharomyces pombe|chr 2|||Manual Length = 1172 Score = 28.3 bits (60), Expect = 1.4 Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 9/93 (9%) Frame = -3 Query: 609 TRDTRTLRKHAERIHRQLHQQKQDVEESANDVVAKGKEEKE-------ETIDEVKKKLDN 451 +++ R R+ + + ++ + D++ G E+KE +TI KKK+ + Sbjct: 960 SQNMRQCREQLHNLKPRFASMRKAINPKVMDMI-DGVEKKEAKLRSMIKTIHRDKKKIQD 1018 Query: 450 TTETSNMSANE--DKLWADVDKDIGELLREVDP 358 T ++ + +K W +V+ GE+ E+ P Sbjct: 1019 TVKSIDRFKRSALEKTWREVNSSFGEIFDELLP 1051 >SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1044 Score = 28.3 bits (60), Expect = 1.4 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = -1 Query: 380 NFFEKWTHQGNEGTDD-EEDLDRYEKFRKTDTKKAKNIESENNESIVLNSSGEKKSVEVN 204 NF K + E E+DL+ K T +K+ K ++SEN+ +++ + K VN Sbjct: 872 NFGNKLAKEHTEKISSLEKDLEAATKTASTLSKELKTVKSENDSLKSVSNDDQNKEKSVN 931 >SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosaccharomyces pombe|chr 2|||Manual Length = 424 Score = 27.5 bits (58), Expect = 2.5 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = -3 Query: 546 KQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTET 439 KQ +EE ++++ KE K+E + + N ET Sbjct: 205 KQKIEEENDEILEDSKESKDENEENKETSTTNVAET 240 >SPAC8F11.04 |||U3 snoRNP-associated protein Cic1/Utp30 family |Schizosaccharomyces pombe|chr 1|||Manual Length = 373 Score = 27.5 bits (58), Expect = 2.5 Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 5/64 (7%) Frame = -3 Query: 609 TRDTRTLRKHA--ERIHRQLHQQKQDVEESANDVVAKGKEEKEE-TIDEVKKKLD--NTT 445 T++T + ++ + E + Q Q+K +V + + D + +K++ T+ EV KKL N Sbjct: 269 TKETASSKRKSDEESLPSQKKQKKVEVAKESKDSKQQNVSDKKQVTVKEVPKKLSVKNAA 328 Query: 444 ETSN 433 +T+N Sbjct: 329 KTTN 332 >SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1402 Score = 27.1 bits (57), Expect = 3.3 Identities = 17/63 (26%), Positives = 30/63 (47%) Frame = -3 Query: 564 RQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDI 385 R+L +++ + D+ A E +EE I+EV +++ +A ED+L V I Sbjct: 806 RELTEEEYYEWKEKYDIAASAIENREEQIEEVADLIESHLTLLGGTAIEDRLQEGVPDSI 865 Query: 384 GEL 376 L Sbjct: 866 ALL 868 >SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual Length = 408 Score = 27.1 bits (57), Expect = 3.3 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 6/50 (12%) Frame = -1 Query: 350 NEGTDDEEDLDRYEKFR------KTDTKKAKNIESENNESIVLNSSGEKK 219 N+ +DDE+D +Y K R + DT +A +++++ S + S K+ Sbjct: 110 NDDSDDEDDNGKYSKLRYEDIEGQEDTNQANDLDADEEGSEISVPSSPKR 159 >SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pombe|chr 2|||Manual Length = 558 Score = 27.1 bits (57), Expect = 3.3 Identities = 11/36 (30%), Positives = 16/36 (44%) Frame = -1 Query: 365 WTHQGNEGTDDEEDLDRYEKFRKTDTKKAKNIESEN 258 W G+E + + YE+ D K K+ ES N Sbjct: 157 WAGYGSEQSSSPLEYSEYEEVESLDVKSEKDTESNN 192 >SPAC1002.04c |taf11||transcription factor TFIID complex subunit Taf11|Schizosaccharomyces pombe|chr 1|||Manual Length = 199 Score = 27.1 bits (57), Expect = 3.3 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = -1 Query: 335 DEEDLDRYEKFRKTDTKKAKNIESENNESIVLNSS 231 DEE + RYE FR+ + K N++ N+ +LN S Sbjct: 101 DEEQMQRYEVFRRANLNKT-NVKKLANQ--ILNQS 132 >SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosaccharomyces pombe|chr 1|||Manual Length = 990 Score = 27.1 bits (57), Expect = 3.3 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = -3 Query: 531 ESANDV-VAKGKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGE 379 ES ND + KG++ E +D V D + N+ NE++ A+ +++ E Sbjct: 67 ESPNDTTINKGEDGNENEVDNVNNN-DKKEDEDNVEENEEEADANEEEEEDE 117 Score = 26.2 bits (55), Expect = 5.8 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = -3 Query: 576 ERIHRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNM-SANEDKLWA 403 +R HR+L +Q+Q+++ + +A+ EK V N + + S N+ +WA Sbjct: 186 DRRHRELDRQRQELQSVDAERLAEEYREKYGRSQTVVGDTSNVPQRLLLPSVNDPNIWA 244 >SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharomyces pombe|chr 2|||Manual Length = 457 Score = 26.6 bits (56), Expect = 4.4 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = -3 Query: 606 RDTRTLRKHAERIHRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKK 460 RD++ + IH + QQ+ + + A KE K ET D +KK+ Sbjct: 231 RDSKEYAAQLQTIHEEYEQQQAHIVRMEELIHAVEKERKTET-DYMKKE 278 >SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 598 Score = 26.6 bits (56), Expect = 4.4 Identities = 16/82 (19%), Positives = 39/82 (47%) Frame = -3 Query: 606 RDTRTLRKHAERIHRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNMS 427 R+ + + ++R K DV+++ + + + + T D VKK L + E ++S Sbjct: 234 RELKKKKAESKRKRTSKPDFKNDVQQNVIEENNESSDNEYATFDRVKKDLFASDEEDDVS 293 Query: 426 ANEDKLWADVDKDIGELLREVD 361 A++ + + + +RE++ Sbjct: 294 ADQLSSYERDKARLTQQIRELE 315 >SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21|Schizosaccharomyces pombe|chr 3|||Manual Length = 911 Score = 26.6 bits (56), Expect = 4.4 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Frame = -3 Query: 558 LHQQKQDVEESANDVVAKGKEEKEET---IDEVKKKLDNTTETSNMSANEDKLWADVDKD 388 +H +KQD D + E+ IDEV+K D E + D ++ + + Sbjct: 441 VHIKKQDKRRLGTDPSTLESDIAEDAALQIDEVRKISDEEVEKIQQVSKRDDIYDILSRS 500 Query: 387 IGELLREVDPPRK 349 + + E+D +K Sbjct: 501 LAPSIYEMDDVKK 513 >SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 750 Score = 26.6 bits (56), Expect = 4.4 Identities = 12/46 (26%), Positives = 25/46 (54%) Frame = -3 Query: 594 TLRKHAERIHRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKL 457 +L++ RQL +Q++D++ ++ K +E+T D K +L Sbjct: 492 SLQEQNNEFDRQLKEQEEDLQNKEEELTELRKLLREQTQDSQKLRL 537 >SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 647 Score = 26.2 bits (55), Expect = 5.8 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -3 Query: 519 DVVAKGKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKD 388 D+V + K E + V++KLD+ + T+ + N + A V KD Sbjct: 6 DIVKQTKNEIHQVTSRVQEKLDSKS-TNAVEQNNNSSQASVTKD 48 >SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 464 Score = 26.2 bits (55), Expect = 5.8 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = -3 Query: 558 LHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTE-TSNMSANEDKLWAD 400 +H++ +S D + K EKEE I+E+ + D + + ++K++A+ Sbjct: 180 VHEENTAALDSEIDELMKQINEKEEKIEEISDETDKLQKLLRELDEEKEKVYAE 233 >SPAC6G10.07 |||nuclear cap-binding complex large subunit |Schizosaccharomyces pombe|chr 1|||Manual Length = 780 Score = 25.8 bits (54), Expect = 7.7 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Frame = -3 Query: 558 LHQQKQDVEESANDVVAKGKEEKEET----IDEVKKKLDNTTETSNMSANEDK 412 L +K +EE+ V EE+E+T +D V ++ +T+ + NE+K Sbjct: 728 LSVKKDTIEEANEPVQENTSEEQEDTKMQPVDAVDEQPSENNQTAADATNEEK 780 >SPAC1F8.05 |isp3|meu4|sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 182 Score = 25.8 bits (54), Expect = 7.7 Identities = 11/37 (29%), Positives = 20/37 (54%) Frame = -1 Query: 365 WTHQGNEGTDDEEDLDRYEKFRKTDTKKAKNIESENN 255 W + ++ + D+E+ +K + + KK K ESE N Sbjct: 65 WEYSSDDDSSDDEESCEKKKPKCCEKKKPKCCESEQN 101 >SPBC216.06c |swi1||replication fork protection complex subunit Swi1|Schizosaccharomyces pombe|chr 2|||Manual Length = 971 Score = 25.8 bits (54), Expect = 7.7 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = -1 Query: 350 NEGTDDEEDLDRYEKFRKTDTKKAKNIESENNESIVLNSSG 228 N TD ++LD +++FRK T++ K+ + N + +G Sbjct: 291 NIKTDGLDELDSHKRFRKRGTRR-KHFDDINKSFFINTEAG 330 >SPBC20F10.03 |||conserved eukaryotic protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 446 Score = 25.8 bits (54), Expect = 7.7 Identities = 20/81 (24%), Positives = 37/81 (45%) Frame = -3 Query: 615 CSTRDTRTLRKHAERIHRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETS 436 C T ++ L AE + QL DV+ +A +A E ++E++ D + S Sbjct: 214 CVTTESEFLASAAEALSEQLDAASIDVQLAAGQALA----ALFERVNEIRPDKDEENDES 269 Query: 435 NMSANEDKLWADVDKDIGELL 373 ++S + + D+ D +LL Sbjct: 270 DVS--QTSKFDDIIPDRNQLL 288 >SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces pombe|chr 1|||Manual Length = 464 Score = 25.8 bits (54), Expect = 7.7 Identities = 17/75 (22%), Positives = 38/75 (50%) Frame = -3 Query: 576 ERIHRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADV 397 E + + +Q Q VEE+ V+ + EKE ++ ++ L T A + ++ A + Sbjct: 384 EMNQKYISEQTQLVEEALTKVMKEKYREKENNLELLETNL-KTHHKDYKHALKKRITA-L 441 Query: 396 DKDIGELLREVDPPR 352 +++ L++E+ P + Sbjct: 442 EEEKNRLIKEIGPEK 456 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,451,258 Number of Sequences: 5004 Number of extensions: 43892 Number of successful extensions: 268 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 252 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 268 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 416455520 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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