Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_L22
(842 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 33 0.067
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 32 0.089
SPBC3B8.09 |||U3 snoRNP-associated protein Utp3 |Schizosaccharom... 31 0.27
SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces pomb... 30 0.47
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 29 0.62
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 29 0.62
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 29 1.1
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 28 1.4
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 28 1.4
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 28 1.4
SPBC1685.08 |||histone deacetylase complex subunit Cti6|Schizosa... 27 2.5
SPAC8F11.04 |||U3 snoRNP-associated protein Cic1/Utp30 family |S... 27 2.5
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 27 3.3
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 27 3.3
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 27 3.3
SPAC1002.04c |taf11||transcription factor TFIID complex subunit ... 27 3.3
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 3.3
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 27 4.4
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 27 4.4
SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 27 4.4
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 27 4.4
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 5.8
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 26 5.8
SPAC6G10.07 |||nuclear cap-binding complex large subunit |Schizo... 26 7.7
SPAC1F8.05 |isp3|meu4|sequence orphan|Schizosaccharomyces pombe|... 26 7.7
SPBC216.06c |swi1||replication fork protection complex subunit S... 26 7.7
SPBC20F10.03 |||conserved eukaryotic protein|Schizosaccharomyces... 26 7.7
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 26 7.7
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 32.7 bits (71), Expect = 0.067
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = -3
Query: 567 HRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKD 388
HR + + + + ND +++ +DE ++ E + +A EDKL V +
Sbjct: 1028 HRFIDESEYQSWKLVNDAALNSLSNRQQLLDEAADLIEKDLEFAGATAIEDKLQVGVPES 1087
Query: 387 IGELLR 370
I L R
Sbjct: 1088 INSLFR 1093
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 32.3 bits (70), Expect = 0.089
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 552 QQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNMSANED 415
QQK + E ++ G +E ++ D+ K DN +E+++MS + D
Sbjct: 363 QQKLENERIVEEIKKNGIQEDSQSTDDSSKDDDNNSESNDMSPHND 408
>SPBC3B8.09 |||U3 snoRNP-associated protein Utp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 597
Score = 30.7 bits (66), Expect = 0.27
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -1
Query: 392 KTLENFFEKWTHQGNEG-TDDEEDLDRYEKFRKTDTKKAKNIESENNESIVLNSSGEKKS 216
KT+E EK + G ++DEED+D +E + + K+I ++ I L K
Sbjct: 310 KTIE-LHEKIASASDIGASEDEEDVDMHESISDNENEGIKDIPVAEDDDITLKFRAAKSK 368
Query: 215 VEVN 204
+ N
Sbjct: 369 INTN 372
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 338 DDEEDLDRYEKFRKTDTKKAKNIESENNE 252
+D++DLD YE K +K AK + EN++
Sbjct: 476 EDQDDLDYYESLDK-KSKMAKKLRKENHD 503
>SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 202
Score = 29.9 bits (64), Expect = 0.47
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -3
Query: 552 QQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDI-GEL 376
++++ +E A +++KG + E + + K D E +AN K W ++ KDI E
Sbjct: 101 RKREQYDELAKPIMSKGLRSRTEQQESIGKLQDAIRELEEENANYVKAW-NLRKDIFDET 159
Query: 375 LREVD 361
L++++
Sbjct: 160 LKQMN 164
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 29.5 bits (63), Expect = 0.62
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 561 QLHQQKQDVEESANDVVAKGKEEKEETIDEV 469
QL Q + + SAN+ G E+KE ++DE+
Sbjct: 476 QLKQSLLNTQNSANENAVNGMEDKESSVDEL 506
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 29.5 bits (63), Expect = 0.62
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = -3
Query: 579 AERIHRQLHQQKQDVEESANDVVAKGKE 496
A+R+ R+L +++DVE +A+D+ KG++
Sbjct: 352 AQRMPRKLKMREEDVEPTADDIEIKGRK 379
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = -3
Query: 588 RKHAERIHRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNMSANEDKL 409
++H H++ Q + E + ND + KG E +EE + +K + +N+ NE
Sbjct: 668 KRHFSLRHKKNASQITNNENNGNDDIKKGDEPEEEHVG--LRKNSTQEKNANLDPNEALK 725
Query: 408 WADV 397
AD+
Sbjct: 726 RADM 729
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -1
Query: 329 EDLDRYEKFRKTDTKKAKNIESENNESIVLNSSGEKK 219
E+L++Y+K +K K KN+E++ ++ SS + K
Sbjct: 333 EELEKYKKSKKVVLGKRKNLENDEESTLRALSSFQSK 369
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 28.3 bits (60), Expect = 1.4
Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Frame = -3
Query: 609 TRDTRTLRKHAERIHRQLHQQKQDVEESANDVVAKGKEEKE-------ETIDEVKKKLDN 451
+++ R R+ + + ++ + D++ G E+KE +TI KKK+ +
Sbjct: 960 SQNMRQCREQLHNLKPRFASMRKAINPKVMDMI-DGVEKKEAKLRSMIKTIHRDKKKIQD 1018
Query: 450 TTETSNMSANE--DKLWADVDKDIGELLREVDP 358
T ++ + +K W +V+ GE+ E+ P
Sbjct: 1019 TVKSIDRFKRSALEKTWREVNSSFGEIFDELLP 1051
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -1
Query: 380 NFFEKWTHQGNEGTDD-EEDLDRYEKFRKTDTKKAKNIESENNESIVLNSSGEKKSVEVN 204
NF K + E E+DL+ K T +K+ K ++SEN+ +++ + K VN
Sbjct: 872 NFGNKLAKEHTEKISSLEKDLEAATKTASTLSKELKTVKSENDSLKSVSNDDQNKEKSVN 931
>SPBC1685.08 |||histone deacetylase complex subunit
Cti6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 424
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 546 KQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTET 439
KQ +EE ++++ KE K+E + + N ET
Sbjct: 205 KQKIEEENDEILEDSKESKDENEENKETSTTNVAET 240
>SPAC8F11.04 |||U3 snoRNP-associated protein Cic1/Utp30 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 373
Score = 27.5 bits (58), Expect = 2.5
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = -3
Query: 609 TRDTRTLRKHA--ERIHRQLHQQKQDVEESANDVVAKGKEEKEE-TIDEVKKKLD--NTT 445
T++T + ++ + E + Q Q+K +V + + D + +K++ T+ EV KKL N
Sbjct: 269 TKETASSKRKSDEESLPSQKKQKKVEVAKESKDSKQQNVSDKKQVTVKEVPKKLSVKNAA 328
Query: 444 ETSN 433
+T+N
Sbjct: 329 KTTN 332
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = -3
Query: 564 RQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDI 385
R+L +++ + D+ A E +EE I+EV +++ +A ED+L V I
Sbjct: 806 RELTEEEYYEWKEKYDIAASAIENREEQIEEVADLIESHLTLLGGTAIEDRLQEGVPDSI 865
Query: 384 GEL 376
L
Sbjct: 866 ALL 868
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Frame = -1
Query: 350 NEGTDDEEDLDRYEKFR------KTDTKKAKNIESENNESIVLNSSGEKK 219
N+ +DDE+D +Y K R + DT +A +++++ S + S K+
Sbjct: 110 NDDSDDEDDNGKYSKLRYEDIEGQEDTNQANDLDADEEGSEISVPSSPKR 159
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -1
Query: 365 WTHQGNEGTDDEEDLDRYEKFRKTDTKKAKNIESEN 258
W G+E + + YE+ D K K+ ES N
Sbjct: 157 WAGYGSEQSSSPLEYSEYEEVESLDVKSEKDTESNN 192
>SPAC1002.04c |taf11||transcription factor TFIID complex subunit
Taf11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 199
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 335 DEEDLDRYEKFRKTDTKKAKNIESENNESIVLNSS 231
DEE + RYE FR+ + K N++ N+ +LN S
Sbjct: 101 DEEQMQRYEVFRRANLNKT-NVKKLANQ--ILNQS 132
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 531 ESANDV-VAKGKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKDIGE 379
ES ND + KG++ E +D V D + N+ NE++ A+ +++ E
Sbjct: 67 ESPNDTTINKGEDGNENEVDNVNNN-DKKEDEDNVEENEEEADANEEEEEDE 117
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 576 ERIHRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNM-SANEDKLWA 403
+R HR+L +Q+Q+++ + +A+ EK V N + + S N+ +WA
Sbjct: 186 DRRHRELDRQRQELQSVDAERLAEEYREKYGRSQTVVGDTSNVPQRLLLPSVNDPNIWA 244
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 26.6 bits (56), Expect = 4.4
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -3
Query: 606 RDTRTLRKHAERIHRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKK 460
RD++ + IH + QQ+ + + A KE K ET D +KK+
Sbjct: 231 RDSKEYAAQLQTIHEEYEQQQAHIVRMEELIHAVEKERKTET-DYMKKE 278
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/82 (19%), Positives = 39/82 (47%)
Frame = -3
Query: 606 RDTRTLRKHAERIHRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNMS 427
R+ + + ++R K DV+++ + + + + T D VKK L + E ++S
Sbjct: 234 RELKKKKAESKRKRTSKPDFKNDVQQNVIEENNESSDNEYATFDRVKKDLFASDEEDDVS 293
Query: 426 ANEDKLWADVDKDIGELLREVD 361
A++ + + + +RE++
Sbjct: 294 ADQLSSYERDKARLTQQIRELE 315
>SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit
Cdc21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -3
Query: 558 LHQQKQDVEESANDVVAKGKEEKEET---IDEVKKKLDNTTETSNMSANEDKLWADVDKD 388
+H +KQD D + E+ IDEV+K D E + D ++ + +
Sbjct: 441 VHIKKQDKRRLGTDPSTLESDIAEDAALQIDEVRKISDEEVEKIQQVSKRDDIYDILSRS 500
Query: 387 IGELLREVDPPRK 349
+ + E+D +K
Sbjct: 501 LAPSIYEMDDVKK 513
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -3
Query: 594 TLRKHAERIHRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKL 457
+L++ RQL +Q++D++ ++ K +E+T D K +L
Sbjct: 492 SLQEQNNEFDRQLKEQEEDLQNKEEELTELRKLLREQTQDSQKLRL 537
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 519 DVVAKGKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADVDKD 388
D+V + K E + V++KLD+ + T+ + N + A V KD
Sbjct: 6 DIVKQTKNEIHQVTSRVQEKLDSKS-TNAVEQNNNSSQASVTKD 48
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 558 LHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTE-TSNMSANEDKLWAD 400
+H++ +S D + K EKEE I+E+ + D + + ++K++A+
Sbjct: 180 VHEENTAALDSEIDELMKQINEKEEKIEEISDETDKLQKLLRELDEEKEKVYAE 233
>SPAC6G10.07 |||nuclear cap-binding complex large subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 780
Score = 25.8 bits (54), Expect = 7.7
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = -3
Query: 558 LHQQKQDVEESANDVVAKGKEEKEET----IDEVKKKLDNTTETSNMSANEDK 412
L +K +EE+ V EE+E+T +D V ++ +T+ + NE+K
Sbjct: 728 LSVKKDTIEEANEPVQENTSEEQEDTKMQPVDAVDEQPSENNQTAADATNEEK 780
>SPAC1F8.05 |isp3|meu4|sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 182
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 365 WTHQGNEGTDDEEDLDRYEKFRKTDTKKAKNIESENN 255
W + ++ + D+E+ +K + + KK K ESE N
Sbjct: 65 WEYSSDDDSSDDEESCEKKKPKCCEKKKPKCCESEQN 101
>SPBC216.06c |swi1||replication fork protection complex subunit
Swi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 971
Score = 25.8 bits (54), Expect = 7.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 350 NEGTDDEEDLDRYEKFRKTDTKKAKNIESENNESIVLNSSG 228
N TD ++LD +++FRK T++ K+ + N + +G
Sbjct: 291 NIKTDGLDELDSHKRFRKRGTRR-KHFDDINKSFFINTEAG 330
>SPBC20F10.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 446
Score = 25.8 bits (54), Expect = 7.7
Identities = 20/81 (24%), Positives = 37/81 (45%)
Frame = -3
Query: 615 CSTRDTRTLRKHAERIHRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETS 436
C T ++ L AE + QL DV+ +A +A E ++E++ D + S
Sbjct: 214 CVTTESEFLASAAEALSEQLDAASIDVQLAAGQALA----ALFERVNEIRPDKDEENDES 269
Query: 435 NMSANEDKLWADVDKDIGELL 373
++S + + D+ D +LL
Sbjct: 270 DVS--QTSKFDDIIPDRNQLL 288
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.8 bits (54), Expect = 7.7
Identities = 17/75 (22%), Positives = 38/75 (50%)
Frame = -3
Query: 576 ERIHRQLHQQKQDVEESANDVVAKGKEEKEETIDEVKKKLDNTTETSNMSANEDKLWADV 397
E + + +Q Q VEE+ V+ + EKE ++ ++ L T A + ++ A +
Sbjct: 384 EMNQKYISEQTQLVEEALTKVMKEKYREKENNLELLETNL-KTHHKDYKHALKKRITA-L 441
Query: 396 DKDIGELLREVDPPR 352
+++ L++E+ P +
Sbjct: 442 EEEKNRLIKEIGPEK 456
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,451,258
Number of Sequences: 5004
Number of extensions: 43892
Number of successful extensions: 268
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 416455520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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