BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_L21 (804 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_7153| Best HMM Match : 6PF2K (HMM E-Value=1.9e-25) 31 1.4 SB_52016| Best HMM Match : Cystatin (HMM E-Value=0.87) 29 5.8 SB_56678| Best HMM Match : WD40 (HMM E-Value=6.4e-22) 28 7.7 SB_28447| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7 >SB_7153| Best HMM Match : 6PF2K (HMM E-Value=1.9e-25) Length = 301 Score = 30.7 bits (66), Expect = 1.4 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 5/65 (7%) Frame = -1 Query: 753 PNXQKHXKLMXLXSYHSFP*GSSKLVRFFEKQDHCLKALDRACRV-----XTAWLDQGAK 589 P+ K+ + + Y G KL FF+ + +A+ R C + ++WLD+G + Sbjct: 62 PSDYKYKVVFNVGEYRRKAVGMDKLHDFFKVDNQEAQAIRRQCAIDCLNDVSSWLDEGVQ 121 Query: 588 SYEMK 574 + E+K Sbjct: 122 AAEVK 126 >SB_52016| Best HMM Match : Cystatin (HMM E-Value=0.87) Length = 212 Score = 28.7 bits (61), Expect = 5.8 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = -1 Query: 357 KRQRTLSPLSKRMAMLGDGDSTSRTHNSQFNHPYG-YQPPVQTADDIAAQPPPRSQA 190 + ++ + PL + L D R H ++ YQ V+ + D A PPPR ++ Sbjct: 117 RAEKLILPLKIYVNQLQDAIEVERNHTRHVSYQLSNYQQRVRRSSDREAPPPPRRRS 173 >SB_56678| Best HMM Match : WD40 (HMM E-Value=6.4e-22) Length = 834 Score = 28.3 bits (60), Expect = 7.7 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +3 Query: 300 HHHRASPCACSAVTECAA 353 H R +PCACS T+C A Sbjct: 540 HRDRHAPCACSTSTKCIA 557 >SB_28447| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 777 Score = 28.3 bits (60), Expect = 7.7 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -2 Query: 470 HRVTRPVLVPHRIHHLHHQIRV 405 HRVTRPV+V R + ++H + V Sbjct: 478 HRVTRPVMVEWRANPIYHLLNV 499 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,312,957 Number of Sequences: 59808 Number of extensions: 304192 Number of successful extensions: 1021 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 918 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1016 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2227723674 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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