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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L20
         (798 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ...    97   3e-21
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit...    69   1e-12
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ...    59   8e-10
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni...    53   5e-08
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C...    52   7e-08
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit...    40   4e-04
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu...    32   0.11 
SPBC16H5.11c |skb1|rmt5|type II protein arginine N-methyltransfe...    31   0.14 
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce...    29   1.0  
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar...    27   3.1  
SPBC119.10 |asn1||asparagine synthetase|Schizosaccharomyces pomb...    27   3.1  
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ...    26   5.4  
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60...    25   9.5  

>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
           Cct7|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 558

 Score = 97.1 bits (231), Expect = 3e-21
 Identities = 49/78 (62%), Positives = 55/78 (70%)
 Frame = -3

Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAES 284
           IPRQL DNAG D T +LNKLR +HA GE   GVD+ S  V +NF K VWEP+ VK NA  
Sbjct: 450 IPRQLCDNAGFDSTNILNKLRMQHAKGEMWAGVDMDSEGVANNFEKFVWEPSTVKSNAIL 509

Query: 283 AACEATAQILSVDETIKN 230
           +A EA   ILSVDETIKN
Sbjct: 510 SATEAATLILSVDETIKN 527



 Score = 49.6 bits (113), Expect = 5e-07
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = -1

Query: 699 AKXMTSILRGGAEQFLEETERSLHDAIMIVR 607
           AK  T ILRGGA+QF+ E ERSLHDAIMIV+
Sbjct: 372 AKTCTLILRGGADQFIAEVERSLHDAIMIVK 402



 Score = 39.5 bits (88), Expect = 5e-04
 Identities = 16/30 (53%), Positives = 25/30 (83%)
 Frame = -2

Query: 596 KNDAVVAGGGAVDMQISAHLRSHSLQLAGQ 507
           KN+ VVAGGGA +M++S +LR +SL ++G+
Sbjct: 406 KNNLVVAGGGACEMELSKYLRDYSLTISGK 435


>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
           Cct3|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 528

 Score = 68.5 bits (160), Expect = 1e-12
 Identities = 34/84 (40%), Positives = 46/84 (54%)
 Frame = -3

Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAES 284
           IPR L  N G +    L +LR KHA G+H+ G+D  +G VVD     VWEP  VKL +  
Sbjct: 445 IPRTLVQNCGANPIKALTELRAKHAEGQHSFGIDGETGRVVDMHEYGVWEPEAVKLQSIK 504

Query: 283 AACEATAQILSVDETIKNVKGGEE 212
            A E+   +L VD+ +  V+   E
Sbjct: 505 TAIESACLLLRVDDIVSGVRKHSE 528


>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
           Cct4|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 527

 Score = 58.8 bits (136), Expect = 8e-10
 Identities = 29/74 (39%), Positives = 45/74 (60%)
 Frame = -3

Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAES 284
           IP  LA+NAGL+   ++ +LR +HA GE T G++V  G V +   + V +P LV ++A  
Sbjct: 449 IPVTLAENAGLNAIQVVTELRSRHANGEKTAGINVRKGIVTNILEENVLQPLLVNISAIQ 508

Query: 283 AACEATAQILSVDE 242
            A E T  I+ +D+
Sbjct: 509 LAAETTKMIMKIDD 522



 Score = 34.7 bits (76), Expect = 0.016
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = -1

Query: 783 HASVLSHTALFXEKQLELTDTTFYWLSGAKXMTSILRGGAEQFLEETERSLHDAIMIVR 607
           HA ++  T+   EK ++ +       +  K ++ + RG     LEE ERSLHDA+ ++R
Sbjct: 347 HADLVEETSSSGEKIVKFSGVK----NAGKTVSILCRGANLLTLEEAERSLHDALCVIR 401



 Score = 30.3 bits (65), Expect = 0.33
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -2

Query: 596 KNDAVVAGGGAVDMQISAHLRSHSLQLAGQGAV 498
           K  A++AGGG+ +++ +  L  H+ QL G+ A+
Sbjct: 405 KQRALIAGGGSPEIEAAQRLLEHARQLEGREAI 437


>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
           Cct1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 556

 Score = 52.8 bits (121), Expect = 5e-08
 Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
 Frame = -3

Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHT------------HGVDVISGEVVDNFAKCV 320
           IPR LA NA  D T L  KLR  HAA ++             +G+D+++G + DN    V
Sbjct: 453 IPRTLAVNAAKDSTELTAKLRAYHAASQNAEVTDVKKRGYKNYGLDLLNGVIRDNVKAGV 512

Query: 319 WEPALVKLNAESAACEATAQILSVDETIK 233
            EP++ KL +  +A EA   IL +D +IK
Sbjct: 513 LEPSMSKLKSLKSAVEACIAILRIDTSIK 541



 Score = 36.7 bits (81), Expect = 0.004
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
 Frame = -1

Query: 741 QLELTDTTFYWLSGAKXMTS---ILRGGAEQFLEETERSLHDAIMIVRRTXQ 595
           Q + +D     + G K  +S   +LRG  E  L+E ERS+HD++ +V+RT +
Sbjct: 358 QEKFSDDECILVKGTKAYSSASIVLRGPNEYSLDEMERSMHDSLSVVKRTLE 409


>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
           Cct2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 527

 Score = 52.4 bits (120), Expect = 7e-08
 Identities = 28/77 (36%), Positives = 41/77 (53%)
 Frame = -3

Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAES 284
           +P  LADNAG D + L+ +L+  H  G  T G+D+  GE+ D  AK + E   +K    S
Sbjct: 442 LPTILADNAGFDSSELVAQLKAAHYDGNDTMGLDMDEGEIADMRAKGILEALKLKQAVVS 501

Query: 283 AACEATAQILSVDETIK 233
           +  E    +L VD  +K
Sbjct: 502 SGSEGAQLLLRVDTILK 518



 Score = 37.9 bits (84), Expect = 0.002
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = -1

Query: 717 FYWLSGAKXMTSILRGGAEQFLEETERSLHDAIMIVRRTXQE 592
           F  +   +  T +LRG   Q L+E+ER++HDA+ ++ +T  E
Sbjct: 358 FSGVEAGEACTIVLRGATHQLLDESERAIHDALAVLSQTVAE 399


>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
           Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 546

 Score = 39.9 bits (89), Expect = 4e-04
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
 Frame = -3

Query: 463 IPRQLADNAGLDGTGLLNKL-RQKHAAGEHTHGVDV--ISGEVVDNFAKCVWEPALVKLN 293
           +PR +++NAGLD T +++KL    H     + GVDV   +   +D     +++  L K +
Sbjct: 448 VPRTISENAGLDPTDVISKLYAAHHKENGESIGVDVECENDGTLDAKEAGIFDVLLAKKS 507

Query: 292 AESAACEATAQILSVDETIKNVKGG 218
           A   A E    +L+VD+ + +   G
Sbjct: 508 AIRLATETVLTVLNVDQVVMSKPAG 532


>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
           Cct5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 546

 Score = 31.9 bits (69), Expect = 0.11
 Identities = 11/38 (28%), Positives = 25/38 (65%)
 Frame = -1

Query: 705 SGAKXMTSILRGGAEQFLEETERSLHDAIMIVRRTXQE 592
           + ++ +T  +RG  +  ++E +R+LHDA+ +VR   ++
Sbjct: 380 ANSRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRD 417


>SPBC16H5.11c |skb1|rmt5|type II protein arginine
           N-methyltransferase Skb1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 645

 Score = 31.5 bits (68), Expect = 0.14
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -1

Query: 351 ERW--WITLRSACGSRPSSSLTPRVPPA-RPPL 262
           E W  W T+RSACG  P   +   +PPA  PP+
Sbjct: 174 ETWKMWDTIRSACGYHPRLKVALELPPACSPPI 206


>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 604

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = +2

Query: 428 VQACIVCQLTRDGLKGSGHCRYSQLLLGQPVVESETGDGQRFACLLLLRQPLQHHSXIVL 607
           VQA ++  L +DG  G  +  Y     G   V + TG G+  + ++ + Q L H +   L
Sbjct: 152 VQAAVLPLLLQDGRHGPMYS-YG----GDVCVSAATGSGKTLSYVIPIVQCLSHRTVPRL 206

Query: 608 RTIMMASCRERSV 646
           R +++   RE +V
Sbjct: 207 RCVVIVPTRELTV 219


>SPBC23G7.08c |rga7||GTPase activating protein
           Rga7|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 695

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -1

Query: 315 SRPSSSLTPRVPPARPP 265
           S PSSS TP  PP  PP
Sbjct: 3   SAPSSSTTPASPPTSPP 19


>SPBC119.10 |asn1||asparagine synthetase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 557

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +2

Query: 299 LDEGRLPHALRKVIHHLSTDNVHTVRVLPSGVLLP*FIEESG 424
           +DEG    ALR VI+HL T +V T+R      LL   I+  G
Sbjct: 309 IDEGL--DALRDVIYHLETYDVTTIRASTPMYLLSRKIKAQG 348


>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
            Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1955

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 387  LGSTRTVWTLSVERWWITLRSAC 319
            L  T TVW   +  WW+++ + C
Sbjct: 1523 LFGTMTVWVAHLIYWWVSIMALC 1545


>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
           Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 582

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -3

Query: 451 LADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVD 338
           + +NAGL+G  ++ KL++ +   E   G D+     VD
Sbjct: 486 ILENAGLEGNLIVGKLKELYGK-EFNIGYDIAKDRFVD 522


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,832,472
Number of Sequences: 5004
Number of extensions: 54674
Number of successful extensions: 179
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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