BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_L20 (798 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P... 104 8e-23 At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 58 7e-09 At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 55 5e-08 At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 51 1e-06 At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP... 50 2e-06 At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 48 1e-05 At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 42 5e-04 At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 40 0.002 At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 38 0.008 At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 38 0.008 At3g50410.1 68416.m05514 Dof-type zinc finger domain-containing ... 31 0.89 At4g00720.1 68417.m00098 shaggy-related protein kinase theta / A... 29 2.7 At1g15890.1 68414.m01906 disease resistance protein (CC-NBS-LRR ... 29 2.7 At5g19650.1 68418.m02338 ovate protein, putative 84% similar to ... 29 3.6 At3g46930.1 68416.m05093 protein kinase family protein contains ... 29 4.7 At5g64280.1 68418.m08075 oxoglutarate/malate translocator, putat... 28 6.2 >At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-PROT:P80313 T-complex protein 1, eta subunit (TCP-1-eta) [Mus musculus]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 557 Score = 104 bits (249), Expect = 8e-23 Identities = 55/89 (61%), Positives = 67/89 (75%), Gaps = 3/89 (3%) Frame = -3 Query: 463 IPRQLADNAGLDGTGLLNKLRQKHA--AGEH-THGVDVISGEVVDNFAKCVWEPALVKLN 293 IPRQL DNAG D T +LNKLRQKHA +GE ++GVD+ +G + D+FA VWEPA+VK+N Sbjct: 448 IPRQLCDNAGFDATDVLNKLRQKHAMQSGEGASYGVDINTGGIADSFANFVWEPAVVKIN 507 Query: 292 AESAACEATAQILSVDETIKNVKGGEEAQ 206 A +AA EA ILSVDET+KN K E AQ Sbjct: 508 AINAATEAACLILSVDETVKNPK-SESAQ 535 Score = 54.4 bits (125), Expect = 8e-08 Identities = 30/58 (51%), Positives = 36/58 (62%), Gaps = 1/58 (1%) Frame = -1 Query: 774 VLSHTALFXEKQLELTD-TTFYWLSGAKXMTSILRGGAEQFLEETERSLHDAIMIVRR 604 VL +F EKQ+ F + T +LRGGA+QF+EE ERSLHDAIMIVRR Sbjct: 344 VLGTCEIFEEKQVGGERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRR 401 Score = 42.7 bits (96), Expect = 3e-04 Identities = 18/30 (60%), Positives = 23/30 (76%) Frame = -2 Query: 596 KNDAVVAGGGAVDMQISAHLRSHSLQLAGQ 507 KN VV GGGA+DM+IS +LR HS +AG+ Sbjct: 404 KNSTVVPGGGAIDMEISKYLRQHSRTIAGK 433 >At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-PROT:P50991- T-complex protein 1, delta subunit (TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 536 Score = 58.0 bits (134), Expect = 7e-09 Identities = 28/76 (36%), Positives = 45/76 (59%) Frame = -3 Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAES 284 IP LA+NAGL+ ++ +LR KHA GE G++V G++ + + V +P LV +A + Sbjct: 458 IPYTLAENAGLNPIAIVTELRNKHAQGEINAGINVRKGQITNILEENVVQPLLVSTSAIT 517 Query: 283 AACEATAQILSVDETI 236 A E IL +D+ + Sbjct: 518 LATECVRMILKIDDIV 533 Score = 36.7 bits (81), Expect = 0.018 Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 4/62 (6%) Frame = -1 Query: 780 ASVLSHTALFXEKQLELTDTTFYWLSGAKXM---TSIL-RGGAEQFLEETERSLHDAIMI 613 A L H L E L D ++G K M TS+L RG + L+E ERSLHDA+ + Sbjct: 351 AEKLGHADLVEEASLG--DGKILKITGIKDMGRTTSVLVRGSNQLVLDEAERSLHDALCV 408 Query: 612 VR 607 VR Sbjct: 409 VR 410 >At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-PROT:P78371- T-complex protein 1, beta subunit (TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 527 Score = 55.2 bits (127), Expect = 5e-08 Identities = 32/76 (42%), Positives = 43/76 (56%) Frame = -3 Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAES 284 IP +ADNAGLD L+ +LR +H G+DVI+G V D + ++E VK Sbjct: 441 IPTTIADNAGLDSAELVAQLRAEHHTEGCNAGIDVITGAVGDMEERGIYEAFKVKQAVLL 500 Query: 283 AACEATAQILSVDETI 236 +A EA+ IL VDE I Sbjct: 501 SATEASEMILRVDEII 516 Score = 34.7 bits (76), Expect = 0.072 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = -1 Query: 681 ILRGGAEQFLEETERSLHDAIMIVRRTXQE 592 +LRG + L+E ERSLHDA+ ++ +T + Sbjct: 369 VLRGASHHVLDEAERSLHDALCVLSQTVND 398 >At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-PROT:P50143- T-complex protein 1, gamma subunit (TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 555 Score = 50.8 bits (116), Expect = 1e-06 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Frame = -3 Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTH-GVDVISGEVVDNFAKCVWEPALVKLNAE 287 IPR LA N G++ + L+ KHA GE+ G+D +G + D +W+ VK Sbjct: 447 IPRTLAQNCGVNVIRTMTALQGKHANGENAWTGIDGNTGAIADMKESKIWDSYNVKAQTF 506 Query: 286 SAACEATAQILSVDETIKNVK 224 A EA +L +D+ + +K Sbjct: 507 KTAIEAACMLLRIDDIVSGIK 527 >At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP-1-alpha / chaperonin (CCT1) identical to SWISS-PROT:P28769- T-complex protein 1, alpha subunit (TCP-1-alpha) [Arabidopsis thaliana] Length = 545 Score = 50.0 bits (114), Expect = 2e-06 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 8/94 (8%) Frame = -3 Query: 463 IPRQLADNAGLDGTGLLNKLRQKH------AAGEH--THGVDVISGEVVDNFAKCVWEPA 308 IP+ LA NA D T L+ KLR H A +H + G+D+++G + +N V EPA Sbjct: 451 IPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHYSSMGLDLVNGTIRNNLEAGVIEPA 510 Query: 307 LVKLNAESAACEATAQILSVDETIKNVKGGEEAQ 206 + K+ A EA IL +D+ IK VK + + Sbjct: 511 MSKVKIIQFATEAAITILRIDDMIKLVKDESQGE 544 Score = 37.5 bits (83), Expect = 0.010 Identities = 16/29 (55%), Positives = 22/29 (75%) Frame = -1 Query: 681 ILRGGAEQFLEETERSLHDAIMIVRRTXQ 595 ILRG + L+E ER+LHDA+ IV+RT + Sbjct: 379 ILRGANDYMLDEMERALHDALCIVKRTLE 407 >At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-PROT:P42932- T-complex protein 1, theta subunit (TCP-1-theta) [Mus musculus]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 549 Score = 47.6 bits (108), Expect = 1e-05 Identities = 26/76 (34%), Positives = 38/76 (50%) Frame = -3 Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAES 284 +P+ LADNAGL+ ++ L H +G G+D+ G D VW+ KL A Sbjct: 451 VPKTLADNAGLNAMEIIAALYTGHGSGNTKLGIDLEEGACKDVSETKVWDLFATKLFALK 510 Query: 283 AACEATAQILSVDETI 236 A +A +L VD+ I Sbjct: 511 YASDAACTVLRVDQII 526 >At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-PROT:P80317- T-complex protein 1, zeta subunit (TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 535 Score = 41.9 bits (94), Expect = 5e-04 Identities = 25/77 (32%), Positives = 42/77 (54%) Frame = -3 Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAES 284 +P+ LA+NAGLD ++ L +H G + G+D+ GE VD +++ VK + Sbjct: 451 VPKTLAENAGLDTQDVIISLTSEHDKG-NIVGLDLQDGEPVDPQLAGIFDNYSVKRQLIN 509 Query: 283 AACEATAQILSVDETIK 233 + +Q+L VDE I+ Sbjct: 510 SGPVIASQLLLVDEVIR 526 >At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-PROT:P80317 T-complex protein 1, zeta subunit (TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 535 Score = 39.9 bits (89), Expect = 0.002 Identities = 23/77 (29%), Positives = 42/77 (54%) Frame = -3 Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAES 284 +P+ LA+NAGLD ++ L +H G + G+++ GE +D +++ VK + Sbjct: 450 VPKTLAENAGLDTQDVIISLTSEHDKG-NVVGLNLQDGEPIDPQLAGIFDNYSVKRQLIN 508 Query: 283 AACEATAQILSVDETIK 233 + +Q+L VDE I+ Sbjct: 509 SGPVIASQLLLVDEVIR 525 >At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative identical to SWISS-PROT:O04450- T-complex protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis thaliana]; strong similarity to SP|P54411 T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 459 Score = 37.9 bits (84), Expect = 0.008 Identities = 14/33 (42%), Positives = 24/33 (72%) Frame = -1 Query: 705 SGAKXMTSILRGGAEQFLEETERSLHDAIMIVR 607 + +K +T +RGG + +EET+RS+HDA+ + R Sbjct: 298 ANSKAVTVFIRGGNKMMIEETKRSIHDALCVAR 330 >At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative identical to SWISS-PROT:O04450- T-complex protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis thaliana]; strong similarity to SP|P54411 T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family Length = 535 Score = 37.9 bits (84), Expect = 0.008 Identities = 14/33 (42%), Positives = 24/33 (72%) Frame = -1 Query: 705 SGAKXMTSILRGGAEQFLEETERSLHDAIMIVR 607 + +K +T +RGG + +EET+RS+HDA+ + R Sbjct: 374 ANSKAVTVFIRGGNKMMIEETKRSIHDALCVAR 406 >At3g50410.1 68416.m05514 Dof-type zinc finger domain-containing protein Length = 253 Score = 31.1 bits (67), Expect = 0.89 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = -2 Query: 368 CGRYQWRGGG*LCEVRVGAGPRQA*RRECRLRGHRSDSISG 246 C RY W GG L +V VG G R++ +R S S+SG Sbjct: 60 CRRY-WTHGGTLRDVPVGGGTRKSAKRSRTCSNSSSSSVSG 99 >At4g00720.1 68417.m00098 shaggy-related protein kinase theta / ASK-theta (ASK8) identical to shaggy-related protein kinase theta (ASK-theta) [Arabidopsis thaliana] SWISS-PROT:Q96287 Length = 472 Score = 29.5 bits (63), Expect = 2.7 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +2 Query: 476 SGHCRYSQLLLGQPVVESETGDGQRFACLLLLRQP 580 SG C ++LLLGQP+ E+G Q + +L P Sbjct: 324 SGGCVMAELLLGQPLFPGESGIDQLVEIIKILGTP 358 >At1g15890.1 68414.m01906 disease resistance protein (CC-NBS-LRR class), putative domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein. Length = 851 Score = 29.5 bits (63), Expect = 2.7 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%) Frame = +1 Query: 442 CLPADEGW---PQRLGPLPLQPTAPWPASCRE 528 CLP DE W +++GP+PLQ P R+ Sbjct: 309 CLPPDEAWELFQKKVGPIPLQSHEDIPTLARK 340 >At5g19650.1 68418.m02338 ovate protein, putative 84% similar to ovate protein (GI:23429649) [Lycopersicon esculentum]; contains TIGRFAM TIGR01568 : uncharacterized plant-specific domain TIGR01568 Length = 221 Score = 29.1 bits (62), Expect = 3.6 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Frame = -1 Query: 357 SVERWWIT-LRSACGSRPSS--SLTPRVPPARPPLRFYQWMRPSR-MSRAVKRRR 205 S ER+++T ++ SRP S S PR P PP FY+ R R + + VK R Sbjct: 40 SSERFFVTKAKTKTPSRPKSHASSCPRASPIFPPNPFYEESRSFRDLRKKVKTNR 94 >At3g46930.1 68416.m05093 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 475 Score = 28.7 bits (61), Expect = 4.7 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -1 Query: 255 YQWMRPSRMSRAVKRRRCLVAAWAALVWD 169 Y+WM P + R R+C V ++ L+W+ Sbjct: 324 YRWMAPEVLKRIPHGRKCDVYSFGLLLWE 352 >At5g64280.1 68418.m08075 oxoglutarate/malate translocator, putative similar to SWISS-PROT:Q41364 2-oxoglutarate/malate translocator, chloroplast precursor [Spinach]{Spinacia oleracea} Length = 549 Score = 28.3 bits (60), Expect = 6.2 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -1 Query: 396 STPLGSTRTVWTLSVERWWITLRSACGSRPSSSLTPRVPPARPP 265 S + ++ T+ +LS+ TLR+ S P P+ PP PP Sbjct: 32 SISVHTSPTLRSLSISSPRFTLRATASSLPEEQNKPQPPPPSPP 75 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,837,792 Number of Sequences: 28952 Number of extensions: 334383 Number of successful extensions: 911 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 869 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 908 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1804564000 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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