Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_L20
(798 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P... 104 8e-23
At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 58 7e-09
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 55 5e-08
At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 51 1e-06
At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP... 50 2e-06
At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 48 1e-05
At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 42 5e-04
At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 40 0.002
At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 38 0.008
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 38 0.008
At3g50410.1 68416.m05514 Dof-type zinc finger domain-containing ... 31 0.89
At4g00720.1 68417.m00098 shaggy-related protein kinase theta / A... 29 2.7
At1g15890.1 68414.m01906 disease resistance protein (CC-NBS-LRR ... 29 2.7
At5g19650.1 68418.m02338 ovate protein, putative 84% similar to ... 29 3.6
At3g46930.1 68416.m05093 protein kinase family protein contains ... 29 4.7
At5g64280.1 68418.m08075 oxoglutarate/malate translocator, putat... 28 6.2
>At3g11830.1 68416.m01450 chaperonin, putative similar to
SWISS-PROT:P80313 T-complex protein 1, eta subunit
(TCP-1-eta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 557
Score = 104 bits (249), Expect = 8e-23
Identities = 55/89 (61%), Positives = 67/89 (75%), Gaps = 3/89 (3%)
Frame = -3
Query: 463 IPRQLADNAGLDGTGLLNKLRQKHA--AGEH-THGVDVISGEVVDNFAKCVWEPALVKLN 293
IPRQL DNAG D T +LNKLRQKHA +GE ++GVD+ +G + D+FA VWEPA+VK+N
Sbjct: 448 IPRQLCDNAGFDATDVLNKLRQKHAMQSGEGASYGVDINTGGIADSFANFVWEPAVVKIN 507
Query: 292 AESAACEATAQILSVDETIKNVKGGEEAQ 206
A +AA EA ILSVDET+KN K E AQ
Sbjct: 508 AINAATEAACLILSVDETVKNPK-SESAQ 535
Score = 54.4 bits (125), Expect = 8e-08
Identities = 30/58 (51%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = -1
Query: 774 VLSHTALFXEKQLELTD-TTFYWLSGAKXMTSILRGGAEQFLEETERSLHDAIMIVRR 604
VL +F EKQ+ F + T +LRGGA+QF+EE ERSLHDAIMIVRR
Sbjct: 344 VLGTCEIFEEKQVGGERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRR 401
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = -2
Query: 596 KNDAVVAGGGAVDMQISAHLRSHSLQLAGQ 507
KN VV GGGA+DM+IS +LR HS +AG+
Sbjct: 404 KNSTVVPGGGAIDMEISKYLRQHSRTIAGK 433
>At3g18190.1 68416.m02314 chaperonin, putative similar to
SWISS-PROT:P50991- T-complex protein 1, delta subunit
(TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 536
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = -3
Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAES 284
IP LA+NAGL+ ++ +LR KHA GE G++V G++ + + V +P LV +A +
Sbjct: 458 IPYTLAENAGLNPIAIVTELRNKHAQGEINAGINVRKGQITNILEENVVQPLLVSTSAIT 517
Query: 283 AACEATAQILSVDETI 236
A E IL +D+ +
Sbjct: 518 LATECVRMILKIDDIV 533
Score = 36.7 bits (81), Expect = 0.018
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = -1
Query: 780 ASVLSHTALFXEKQLELTDTTFYWLSGAKXM---TSIL-RGGAEQFLEETERSLHDAIMI 613
A L H L E L D ++G K M TS+L RG + L+E ERSLHDA+ +
Sbjct: 351 AEKLGHADLVEEASLG--DGKILKITGIKDMGRTTSVLVRGSNQLVLDEAERSLHDALCV 408
Query: 612 VR 607
VR
Sbjct: 409 VR 410
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/76 (42%), Positives = 43/76 (56%)
Frame = -3
Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAES 284
IP +ADNAGLD L+ +LR +H G+DVI+G V D + ++E VK
Sbjct: 441 IPTTIADNAGLDSAELVAQLRAEHHTEGCNAGIDVITGAVGDMEERGIYEAFKVKQAVLL 500
Query: 283 AACEATAQILSVDETI 236
+A EA+ IL VDE I
Sbjct: 501 SATEASEMILRVDEII 516
Score = 34.7 bits (76), Expect = 0.072
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -1
Query: 681 ILRGGAEQFLEETERSLHDAIMIVRRTXQE 592
+LRG + L+E ERSLHDA+ ++ +T +
Sbjct: 369 VLRGASHHVLDEAERSLHDALCVLSQTVND 398
>At5g26360.1 68418.m03151 chaperonin, putative similar to
SWISS-PROT:P50143- T-complex protein 1, gamma subunit
(TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 555
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = -3
Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTH-GVDVISGEVVDNFAKCVWEPALVKLNAE 287
IPR LA N G++ + L+ KHA GE+ G+D +G + D +W+ VK
Sbjct: 447 IPRTLAQNCGVNVIRTMTALQGKHANGENAWTGIDGNTGAIADMKESKIWDSYNVKAQTF 506
Query: 286 SAACEATAQILSVDETIKNVK 224
A EA +L +D+ + +K
Sbjct: 507 KTAIEAACMLLRIDDIVSGIK 527
>At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit /
TCP-1-alpha / chaperonin (CCT1) identical to
SWISS-PROT:P28769- T-complex protein 1, alpha subunit
(TCP-1-alpha) [Arabidopsis thaliana]
Length = 545
Score = 50.0 bits (114), Expect = 2e-06
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Frame = -3
Query: 463 IPRQLADNAGLDGTGLLNKLRQKH------AAGEH--THGVDVISGEVVDNFAKCVWEPA 308
IP+ LA NA D T L+ KLR H A +H + G+D+++G + +N V EPA
Sbjct: 451 IPKVLAVNAAKDATELVAKLRAYHHTAQTKADKKHYSSMGLDLVNGTIRNNLEAGVIEPA 510
Query: 307 LVKLNAESAACEATAQILSVDETIKNVKGGEEAQ 206
+ K+ A EA IL +D+ IK VK + +
Sbjct: 511 MSKVKIIQFATEAAITILRIDDMIKLVKDESQGE 544
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -1
Query: 681 ILRGGAEQFLEETERSLHDAIMIVRRTXQ 595
ILRG + L+E ER+LHDA+ IV+RT +
Sbjct: 379 ILRGANDYMLDEMERALHDALCIVKRTLE 407
>At3g03960.1 68416.m00415 chaperonin, putative similar to
SWISS-PROT:P42932- T-complex protein 1, theta subunit
(TCP-1-theta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 549
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = -3
Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAES 284
+P+ LADNAGL+ ++ L H +G G+D+ G D VW+ KL A
Sbjct: 451 VPKTLADNAGLNAMEIIAALYTGHGSGNTKLGIDLEEGACKDVSETKVWDLFATKLFALK 510
Query: 283 AACEATAQILSVDETI 236
A +A +L VD+ I
Sbjct: 511 YASDAACTVLRVDQII 526
>At3g02530.1 68416.m00241 chaperonin, putative similar to
SWISS-PROT:P80317- T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/77 (32%), Positives = 42/77 (54%)
Frame = -3
Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAES 284
+P+ LA+NAGLD ++ L +H G + G+D+ GE VD +++ VK +
Sbjct: 451 VPKTLAENAGLDTQDVIISLTSEHDKG-NIVGLDLQDGEPVDPQLAGIFDNYSVKRQLIN 509
Query: 283 AACEATAQILSVDETIK 233
+ +Q+L VDE I+
Sbjct: 510 SGPVIASQLLLVDEVIR 526
>At5g16070.1 68418.m01878 chaperonin, putative similar to
SWISS-PROT:P80317 T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/77 (29%), Positives = 42/77 (54%)
Frame = -3
Query: 463 IPRQLADNAGLDGTGLLNKLRQKHAAGEHTHGVDVISGEVVDNFAKCVWEPALVKLNAES 284
+P+ LA+NAGLD ++ L +H G + G+++ GE +D +++ VK +
Sbjct: 450 VPKTLAENAGLDTQDVIISLTSEHDKG-NVVGLNLQDGEPIDPQLAGIFDNYSVKRQLIN 508
Query: 283 AACEATAQILSVDETIK 233
+ +Q+L VDE I+
Sbjct: 509 SGPVIASQLLLVDEVIR 525
>At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 459
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -1
Query: 705 SGAKXMTSILRGGAEQFLEETERSLHDAIMIVR 607
+ +K +T +RGG + +EET+RS+HDA+ + R
Sbjct: 298 ANSKAVTVFIRGGNKMMIEETKRSIHDALCVAR 330
>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 535
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -1
Query: 705 SGAKXMTSILRGGAEQFLEETERSLHDAIMIVR 607
+ +K +T +RGG + +EET+RS+HDA+ + R
Sbjct: 374 ANSKAVTVFIRGGNKMMIEETKRSIHDALCVAR 406
>At3g50410.1 68416.m05514 Dof-type zinc finger domain-containing
protein
Length = 253
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -2
Query: 368 CGRYQWRGGG*LCEVRVGAGPRQA*RRECRLRGHRSDSISG 246
C RY W GG L +V VG G R++ +R S S+SG
Sbjct: 60 CRRY-WTHGGTLRDVPVGGGTRKSAKRSRTCSNSSSSSVSG 99
>At4g00720.1 68417.m00098 shaggy-related protein kinase theta /
ASK-theta (ASK8) identical to shaggy-related protein
kinase theta (ASK-theta) [Arabidopsis thaliana]
SWISS-PROT:Q96287
Length = 472
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 476 SGHCRYSQLLLGQPVVESETGDGQRFACLLLLRQP 580
SG C ++LLLGQP+ E+G Q + +L P
Sbjct: 324 SGGCVMAELLLGQPLFPGESGIDQLVEIIKILGTP 358
>At1g15890.1 68414.m01906 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 851
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +1
Query: 442 CLPADEGW---PQRLGPLPLQPTAPWPASCRE 528
CLP DE W +++GP+PLQ P R+
Sbjct: 309 CLPPDEAWELFQKKVGPIPLQSHEDIPTLARK 340
>At5g19650.1 68418.m02338 ovate protein, putative 84% similar to
ovate protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 221
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = -1
Query: 357 SVERWWIT-LRSACGSRPSS--SLTPRVPPARPPLRFYQWMRPSR-MSRAVKRRR 205
S ER+++T ++ SRP S S PR P PP FY+ R R + + VK R
Sbjct: 40 SSERFFVTKAKTKTPSRPKSHASSCPRASPIFPPNPFYEESRSFRDLRKKVKTNR 94
>At3g46930.1 68416.m05093 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 475
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 255 YQWMRPSRMSRAVKRRRCLVAAWAALVWD 169
Y+WM P + R R+C V ++ L+W+
Sbjct: 324 YRWMAPEVLKRIPHGRKCDVYSFGLLLWE 352
>At5g64280.1 68418.m08075 oxoglutarate/malate translocator, putative
similar to SWISS-PROT:Q41364 2-oxoglutarate/malate
translocator, chloroplast precursor [Spinach]{Spinacia
oleracea}
Length = 549
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 396 STPLGSTRTVWTLSVERWWITLRSACGSRPSSSLTPRVPPARPP 265
S + ++ T+ +LS+ TLR+ S P P+ PP PP
Sbjct: 32 SISVHTSPTLRSLSISSPRFTLRATASSLPEEQNKPQPPPPSPP 75
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,837,792
Number of Sequences: 28952
Number of extensions: 334383
Number of successful extensions: 911
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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