Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L19
         (786 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    26   0.30 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    26   0.30 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    26   0.30 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.52 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.52 
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    22   6.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   6.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.4  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 567 LSKLVEGSVFLRNVVGAEILYRFYIRHTFER 659
           L K ++G V L +++ A   Y  Y+RHT+ R
Sbjct: 41  LWKKIQG-VVLVSIIAAGTAYSIYVRHTYYR 70


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 567 LSKLVEGSVFLRNVVGAEILYRFYIRHTFER 659
           L K ++G V L +++ A   Y  Y+RHT+ R
Sbjct: 41  LWKKIQG-VVLVSIIAAGTAYSIYVRHTYYR 70


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +2

Query: 236 GASRGSAPNPARSRREAPSRTCAG 307
           G  RG  P PARSRR  P+   AG
Sbjct: 327 GGRRG--PGPARSRRHLPAHLVAG 348


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 493 AGNLHSSIGTPMASVIFRSGISGMSSPNS*KDPSSFVMLLARRYSIASIYVIR 651
           A +L+ SI +P A     SG+S ++SP     PS    + +   S+AS Y+++
Sbjct: 674 AESLNQSISSPGAL----SGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQ 722


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 493 AGNLHSSIGTPMASVIFRSGISGMSSPNS*KDPSSFVMLLARRYSIASIYVIR 651
           A +L+ SI +P A     SG+S ++SP     PS    + +   S+AS Y+++
Sbjct: 566 AESLNQSISSPGAL----SGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQ 614


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 544 RSGISGMSSPNS*KDPSSFVMLL 612
           RSG S  S  N+ K+P   +ML+
Sbjct: 30  RSGSSAGSDANNCKEPVETIMLI 52


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 326 PYYWYTDQRKFGSVPHGGYGLGLE 255
           PYY   D     ++ H  +G GLE
Sbjct: 257 PYYSNMDYLSSSTMSHSQFGNGLE 280


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/42 (26%), Positives = 14/42 (33%)
 Frame = +2

Query: 185 ALGSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTCAGP 310
           + G     + P    G G      P+P   RR     TC  P
Sbjct: 253 SFGLHATGSAPSPTAGAGGLPPQVPSPRSQRRYTGRATCDCP 294


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 225 PHPGRVSLPSLPRAV 181
           P PG V  PS PR++
Sbjct: 55  PTPGDVPTPSSPRSI 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,441
Number of Sequences: 336
Number of extensions: 3372
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)