Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L19
         (786 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           27   0.87 
AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    26   1.5  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   2.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.5  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   8.1  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 26.6 bits (56), Expect = 0.87
 Identities = 17/37 (45%), Positives = 18/37 (48%)
 Frame = +2

Query: 215  PGCGTGPGASRGSAPNPARSRREAPSRTCAGPYTSST 325
            PG GT   AS  S P PA      PSR+ A   TS T
Sbjct: 1299 PGSGTECSAST-SEPAPAAPSNSTPSRSVARIVTSFT 1334


>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +3

Query: 195 ARVETHVPDVVPVQEPAEEALQ 260
           A++ TH+PD+ P ++  EE L+
Sbjct: 182 AKMGTHIPDLEPTRKTIEEELR 203


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 191  GSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRT 298
            GS    +R    +G  ASRGS  + +RSR  + SR+
Sbjct: 1140 GSRKSGSRSRSRSGSQASRGSRRSRSRSRSRSGSRS 1175


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 230 GPGASRGSAPNPARSRREAPSRTCAGPYT 316
           GPGA+  + P P   R E P +  A   T
Sbjct: 909 GPGAAAATGPPPPTHRLEQPPQVVAAAPT 937


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 452 RRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKHEG 339
           R+ TE V +L      ++GG + +W     ME   ++G
Sbjct: 104 RKWTEIVSMLPRNRDTVIGGYVNVWSGAWGMERRPNDG 141


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,835
Number of Sequences: 2352
Number of extensions: 14148
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)