BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_L19 (786 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical p... 244 4e-65 Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical pr... 81 7e-16 AL161712-18|CAC70140.1| 448|Caenorhabditis elegans Hypothetical... 75 6e-14 Z81497-3|CAB04081.2| 593|Caenorhabditis elegans Hypothetical pr... 40 0.003 U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna ... 34 0.10 U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna ... 34 0.10 U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna ... 34 0.10 AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.93 AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.93 AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.93 AC087735-1|AAK31560.2| 98|Caenorhabditis elegans Hypothetical ... 31 0.93 Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 30 2.2 AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical... 29 2.9 AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical... 29 2.9 Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 3.8 Z81454-7|CAB76407.1| 378|Caenorhabditis elegans Hypothetical pr... 29 5.0 AF125448-7|AAD12812.2| 302|Caenorhabditis elegans Cyclin c prot... 29 5.0 AC084159-12|ABO16466.1| 377|Caenorhabditis elegans F-box a prot... 29 5.0 U40942-2|AAC47072.2| 201|Caenorhabditis elegans Hypothetical pr... 28 6.6 Z68882-16|CAE17745.1| 118|Caenorhabditis elegans Hypothetical p... 28 8.7 Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.7 AL117202-24|CAD27612.1| 565|Caenorhabditis elegans Hypothetical... 28 8.7 AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 8.7 AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 28 8.7 >Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical protein F22D6.3a protein. Length = 545 Score = 244 bits (598), Expect = 4e-65 Identities = 107/160 (66%), Positives = 126/160 (78%) Frame = -2 Query: 659 PFKRMTYIEAIEYLRANNITKEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIKS 480 PFKRM Y EAIE+L+ N++ E G + +GEDI E ER+MTD IGVPILL +FP IK+ Sbjct: 384 PFKRMPYKEAIEWLQKNDVRNEMGEKFVYGEDIAEAAERRMTDTIGVPILLNRFPHGIKA 443 Query: 479 FYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKHEGIDPSPYYWYTDQR 300 FYM RC DD LTESVD+LMPGVGEIVGGSMRIW ++L+ ++ G+D YYWY DQR Sbjct: 444 FYMPRCADDNELTESVDLLMPGVGEIVGGSMRIWKEDQLLAAFEKGGLDSKNYYWYMDQR 503 Query: 299 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERC 180 K+GSVPHGGYGLGLERF+CWL D HIRDVCLYPRF+ RC Sbjct: 504 KYGSVPHGGYGLGLERFICWLTDTNHIRDVCLYPRFVGRC 543 >Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical protein B0464.1 protein. Length = 531 Score = 81.4 bits (192), Expect = 7e-16 Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 1/163 (0%) Frame = -2 Query: 662 EPFKRMTYIEAIEYLRANNITKEDGSFYEFGEDIPEMPERKMTDAIGVPI-LLCKFPAEI 486 EP + Y +AI LR N I E G + + + + + + +L KFP + Sbjct: 371 EPPLILKYPDAITLLRENGI--EIGDEDDLSTPVEKFLGKLVKEKYSTDFYVLDKFPLSV 428 Query: 485 KSFYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKHEGIDPSPYYWYTD 306 + FY D R + S D+ M G EI+ G+ RI D + L+E KH +D + Y D Sbjct: 429 RPFYTMPDAHDERYSNSYDMFMRGE-EILSGAQRIHDADMLVERAKHHQVDLAKIQSYID 487 Query: 305 QRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERCT 177 K+G PH G G+GLER L ++IR L+PR +R T Sbjct: 488 SFKYGCPPHAGGGIGLERVTMLFLGLHNIRLASLFPRDPKRLT 530 >AL161712-18|CAC70140.1| 448|Caenorhabditis elegans Hypothetical protein Y66D12A.23 protein. Length = 448 Score = 74.9 bits (176), Expect = 6e-14 Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%) Frame = -2 Query: 656 FKRMTYIEAIEYL--RANNITKEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIK 483 F R+ Y EA+ L + + +T + G + D+ ++ + PI + +P K Sbjct: 273 FPRIRYDEAVHLLALKGSKVTAKSGFSKKNELDLVKLHDDH-------PIFVTHYPVGQK 325 Query: 482 SFYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKHEGIDPSPYYWYTDQ 303 FYM+R D +LT S D+L+PG+GE+ GGS+R EEL + GID WY + Sbjct: 326 PFYMAR---DGQLTLSFDLLVPGIGELAGGSLREQSAEELQR--RGCGID-----WYLEM 375 Query: 302 RKFGSVPHGGYGLGLERFLCWLL 234 R+ G P GG+G+G ER L +L+ Sbjct: 376 RRRGQPPTGGFGIGFERMLQYLI 398 >Z81497-3|CAB04081.2| 593|Caenorhabditis elegans Hypothetical protein F10C2.6 protein. Length = 593 Score = 39.5 bits (88), Expect = 0.003 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%) Frame = -2 Query: 431 DVLMPGVGEIVGGSMRIWDHEELMEGYKHEGIDPSPYYWYTDQRKFGSVPHGGYGLGLER 252 D+++ GV E+ GGS+RI + E K G + G+ PHGG+ LGL+R Sbjct: 479 DLVINGV-EMGGGSIRIENSEIQRHVLKVLGEPTDEMEHLLNALSHGAPPHGGFALGLDR 537 Query: 251 FLCWLLDRYH----IRDVCLYPR 195 F+ L + +RDV +P+ Sbjct: 538 FVAMLTSDGNPLTPVRDVIAFPK 560 >U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna synthetase protein1, isoform c protein. Length = 514 Score = 34.3 bits (75), Expect = 0.10 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = -2 Query: 299 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 198 ++G P GG+G+G++R L D +I++V L+P Sbjct: 460 EYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFP 493 >U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna synthetase protein1, isoform b protein. Length = 596 Score = 34.3 bits (75), Expect = 0.10 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = -2 Query: 299 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 198 ++G P GG+G+G++R L D +I++V L+P Sbjct: 542 EYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFP 575 >U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna synthetase protein1, isoform a protein. Length = 572 Score = 34.3 bits (75), Expect = 0.10 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = -2 Query: 299 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 198 ++G P GG+G+G++R L D +I++V L+P Sbjct: 518 EYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFP 551 >AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform b protein. Length = 518 Score = 31.1 bits (67), Expect = 0.93 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +2 Query: 224 GTGPGASRGSAPNPARSRREAPSRT--CAGPYTSSTG*GR 337 G+ P A GS P P R +R+AP R+ P T S GR Sbjct: 319 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGR 358 >AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform c protein. Length = 539 Score = 31.1 bits (67), Expect = 0.93 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +2 Query: 224 GTGPGASRGSAPNPARSRREAPSRT--CAGPYTSSTG*GR 337 G+ P A GS P P R +R+AP R+ P T S GR Sbjct: 340 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGR 379 >AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform a protein. Length = 524 Score = 31.1 bits (67), Expect = 0.93 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +2 Query: 224 GTGPGASRGSAPNPARSRREAPSRT--CAGPYTSSTG*GR 337 G+ P A GS P P R +R+AP R+ P T S GR Sbjct: 325 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGR 364 >AC087735-1|AAK31560.2| 98|Caenorhabditis elegans Hypothetical protein Y35H6.3 protein. Length = 98 Score = 31.1 bits (67), Expect = 0.93 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +3 Query: 132 RQNKDDTSSGRGAQGRAPL*EARVETHVPDVVPVQEPAEEALQTQPVAAVRHRA 293 ++ K SS +P E+ VE H+P +QE EE T+P R RA Sbjct: 13 KERKRHQSSDYETSEISPGEESSVEDHIPSCSEMQEEIEELNSTKPTPKSRKRA 66 >Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical protein H06A10.2 protein. Length = 305 Score = 29.9 bits (64), Expect = 2.2 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +2 Query: 191 GSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTC-AGP 310 G G+ +PG PGA+ A P ++ P + C AGP Sbjct: 119 GKPGKPGKPGAPGAPGAAGKGASAPCEAKTPPPCQPCPAGP 159 >AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical protein Y105C5B.21b protein. Length = 1084 Score = 29.5 bits (63), Expect = 2.9 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = -2 Query: 383 IWDHEELMEGYKHEGIDPSPYYWYTDQR 300 +W H+EL +G+K G+ + +Y T +R Sbjct: 966 MWQHKELHDGFKRSGLKEADFYSGTARR 993 >AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical protein Y105C5B.21a protein. Length = 1254 Score = 29.5 bits (63), Expect = 2.9 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = -2 Query: 383 IWDHEELMEGYKHEGIDPSPYYWYTDQR 300 +W H+EL +G+K G+ + +Y T +R Sbjct: 1136 MWQHKELHDGFKRSGLKEADFYSGTARR 1163 >Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical protein F54B11.2 protein. Length = 304 Score = 29.1 bits (62), Expect = 3.8 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +2 Query: 191 GSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTC-AGP 310 G G+ +PG PGA A P ++ P + C AGP Sbjct: 118 GKPGKPGKPGAPGNPGAPGKGAAVPCEAKTPPPCKPCPAGP 158 >Z81454-7|CAB76407.1| 378|Caenorhabditis elegans Hypothetical protein B0391.11 protein. Length = 378 Score = 28.7 bits (61), Expect = 5.0 Identities = 10/30 (33%), Positives = 21/30 (70%) Frame = +3 Query: 576 LVEGSVFLRNVVGAEILYRFYIRHTFERFC 665 ++E +F+R+ + E+L+R IR +++ FC Sbjct: 5 VLENPIFIRSCILYEVLHRKPIRESYKNFC 34 >AF125448-7|AAD12812.2| 302|Caenorhabditis elegans Cyclin c protein 1 protein. Length = 302 Score = 28.7 bits (61), Expect = 5.0 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Frame = +3 Query: 585 GSVFLRNVVGAEILY--RFYIRHTFERFCGFLKFGLSSYTSC 704 G + V+ I+Y RFY+R +F C FL + + +C Sbjct: 63 GCKLRQQVIATAIIYFKRFYLRQSFRDMCPFLVASTALFLAC 104 >AC084159-12|ABO16466.1| 377|Caenorhabditis elegans F-box a protein protein 222 protein. Length = 377 Score = 28.7 bits (61), Expect = 5.0 Identities = 10/30 (33%), Positives = 21/30 (70%) Frame = +3 Query: 576 LVEGSVFLRNVVGAEILYRFYIRHTFERFC 665 ++E +F+R+ + E+L+R IR +++ FC Sbjct: 5 VLENPIFIRSCILNEVLHRKPIRESYKNFC 34 >U40942-2|AAC47072.2| 201|Caenorhabditis elegans Hypothetical protein K02E10.6 protein. Length = 201 Score = 28.3 bits (60), Expect = 6.6 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = -2 Query: 242 WLLDRYHIRDVCLYPRFLERCTXLSASTRRRIVFILPDNMTL 117 WL DRY+ D Y + C T R+ +F DNM + Sbjct: 91 WLGDRYYYMDNYYYLATRDTCAYRMNETERQHLFYEEDNMPI 132 >Z68882-16|CAE17745.1| 118|Caenorhabditis elegans Hypothetical protein C47E12.13 protein. Length = 118 Score = 27.9 bits (59), Expect = 8.7 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = +3 Query: 552 HFRDVLSKLVEGSVFLRNVVGAEILYRFY 638 +FR+V++ EGS F R V G E +YRF+ Sbjct: 66 NFRNVIN---EGSKFFRKVFGHENVYRFH 91 >Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical protein F02D10.1 protein. Length = 316 Score = 27.9 bits (59), Expect = 8.7 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%) Frame = +2 Query: 191 GSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTC-AGP 310 G G +PG PGAS A P P + C AGP Sbjct: 129 GKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQPCPAGP 169 >AL117202-24|CAD27612.1| 565|Caenorhabditis elegans Hypothetical protein Y47D3A.30 protein. Length = 565 Score = 27.9 bits (59), Expect = 8.7 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +3 Query: 636 YIRHTFERFCGFLKFGLSSYTSC 704 Y ++TF +F GF KFG S SC Sbjct: 539 YQKYTFTKFAGFGKFGKFSGHSC 561 >AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein 103 protein. Length = 371 Score = 27.9 bits (59), Expect = 8.7 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +2 Query: 191 GSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTC-AGP 310 G G D PG PG++ G+ N A +TC AGP Sbjct: 149 GQAGLDGLPGAPGQPGSNGGAGSNGASEGSAGGCKTCPAGP 189 >AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter than wild-typeprotein 9 protein. Length = 315 Score = 27.9 bits (59), Expect = 8.7 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 5/47 (10%) Frame = +2 Query: 191 GSEGRDTRPGCGTGPG-----ASRGSAPNPARSRREAPSRTCAGPYT 316 G +G D +PG G PG +RG A NP + P P T Sbjct: 224 GGKGHDGKPGLGGQPGVRGAVGARGDAGNPGLPGPQGPKGEPGNPGT 270 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,343,995 Number of Sequences: 27780 Number of extensions: 322960 Number of successful extensions: 1146 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1060 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1142 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1903721438 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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