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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L19
         (786 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical p...   244   4e-65
Z19152-1|CAA79536.1|  531|Caenorhabditis elegans Hypothetical pr...    81   7e-16
AL161712-18|CAC70140.1|  448|Caenorhabditis elegans Hypothetical...    75   6e-14
Z81497-3|CAB04081.2|  593|Caenorhabditis elegans Hypothetical pr...    40   0.003
U41105-3|AAX88810.1|  514|Caenorhabditis elegans Lysyl (k) trna ...    34   0.10 
U41105-2|AAK68395.1|  596|Caenorhabditis elegans Lysyl (k) trna ...    34   0.10 
U41105-1|AAA82396.1|  572|Caenorhabditis elegans Lysyl (k) trna ...    34   0.10 
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    31   0.93 
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    31   0.93 
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    31   0.93 
AC087735-1|AAK31560.2|   98|Caenorhabditis elegans Hypothetical ...    31   0.93 
Z99773-3|CAE11316.1|  305|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical...    29   2.9  
AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical...    29   2.9  
Z70208-2|CAA94136.1|  304|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z81454-7|CAB76407.1|  378|Caenorhabditis elegans Hypothetical pr...    29   5.0  
AF125448-7|AAD12812.2|  302|Caenorhabditis elegans Cyclin c prot...    29   5.0  
AC084159-12|ABO16466.1|  377|Caenorhabditis elegans F-box a prot...    29   5.0  
U40942-2|AAC47072.2|  201|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z68882-16|CAE17745.1|  118|Caenorhabditis elegans Hypothetical p...    28   8.7  
Z67990-1|CAA91932.1|  316|Caenorhabditis elegans Hypothetical pr...    28   8.7  
AL117202-24|CAD27612.1|  565|Caenorhabditis elegans Hypothetical...    28   8.7  
AF045646-2|AAK29827.1|  371|Caenorhabditis elegans Collagen prot...    28   8.7  
AF016687-1|AAC48094.2|  315|Caenorhabditis elegans Dumpy : short...    28   8.7  

>Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical
           protein F22D6.3a protein.
          Length = 545

 Score =  244 bits (598), Expect = 4e-65
 Identities = 107/160 (66%), Positives = 126/160 (78%)
 Frame = -2

Query: 659 PFKRMTYIEAIEYLRANNITKEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIKS 480
           PFKRM Y EAIE+L+ N++  E G  + +GEDI E  ER+MTD IGVPILL +FP  IK+
Sbjct: 384 PFKRMPYKEAIEWLQKNDVRNEMGEKFVYGEDIAEAAERRMTDTIGVPILLNRFPHGIKA 443

Query: 479 FYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKHEGIDPSPYYWYTDQR 300
           FYM RC DD  LTESVD+LMPGVGEIVGGSMRIW  ++L+  ++  G+D   YYWY DQR
Sbjct: 444 FYMPRCADDNELTESVDLLMPGVGEIVGGSMRIWKEDQLLAAFEKGGLDSKNYYWYMDQR 503

Query: 299 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERC 180
           K+GSVPHGGYGLGLERF+CWL D  HIRDVCLYPRF+ RC
Sbjct: 504 KYGSVPHGGYGLGLERFICWLTDTNHIRDVCLYPRFVGRC 543


>Z19152-1|CAA79536.1|  531|Caenorhabditis elegans Hypothetical
           protein B0464.1 protein.
          Length = 531

 Score = 81.4 bits (192), Expect = 7e-16
 Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
 Frame = -2

Query: 662 EPFKRMTYIEAIEYLRANNITKEDGSFYEFGEDIPEMPERKMTDAIGVPI-LLCKFPAEI 486
           EP   + Y +AI  LR N I  E G   +    + +   + + +       +L KFP  +
Sbjct: 371 EPPLILKYPDAITLLRENGI--EIGDEDDLSTPVEKFLGKLVKEKYSTDFYVLDKFPLSV 428

Query: 485 KSFYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKHEGIDPSPYYWYTD 306
           + FY      D R + S D+ M G  EI+ G+ RI D + L+E  KH  +D +    Y D
Sbjct: 429 RPFYTMPDAHDERYSNSYDMFMRGE-EILSGAQRIHDADMLVERAKHHQVDLAKIQSYID 487

Query: 305 QRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERCT 177
             K+G  PH G G+GLER     L  ++IR   L+PR  +R T
Sbjct: 488 SFKYGCPPHAGGGIGLERVTMLFLGLHNIRLASLFPRDPKRLT 530


>AL161712-18|CAC70140.1|  448|Caenorhabditis elegans Hypothetical
           protein Y66D12A.23 protein.
          Length = 448

 Score = 74.9 bits (176), Expect = 6e-14
 Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
 Frame = -2

Query: 656 FKRMTYIEAIEYL--RANNITKEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIK 483
           F R+ Y EA+  L  + + +T + G   +   D+ ++ +         PI +  +P   K
Sbjct: 273 FPRIRYDEAVHLLALKGSKVTAKSGFSKKNELDLVKLHDDH-------PIFVTHYPVGQK 325

Query: 482 SFYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKHEGIDPSPYYWYTDQ 303
            FYM+R   D +LT S D+L+PG+GE+ GGS+R    EEL    +  GID     WY + 
Sbjct: 326 PFYMAR---DGQLTLSFDLLVPGIGELAGGSLREQSAEELQR--RGCGID-----WYLEM 375

Query: 302 RKFGSVPHGGYGLGLERFLCWLL 234
           R+ G  P GG+G+G ER L +L+
Sbjct: 376 RRRGQPPTGGFGIGFERMLQYLI 398


>Z81497-3|CAB04081.2|  593|Caenorhabditis elegans Hypothetical
           protein F10C2.6 protein.
          Length = 593

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
 Frame = -2

Query: 431 DVLMPGVGEIVGGSMRIWDHEELMEGYKHEGIDPSPYYWYTDQRKFGSVPHGGYGLGLER 252
           D+++ GV E+ GGS+RI + E      K  G          +    G+ PHGG+ LGL+R
Sbjct: 479 DLVINGV-EMGGGSIRIENSEIQRHVLKVLGEPTDEMEHLLNALSHGAPPHGGFALGLDR 537

Query: 251 FLCWLLDRYH----IRDVCLYPR 195
           F+  L    +    +RDV  +P+
Sbjct: 538 FVAMLTSDGNPLTPVRDVIAFPK 560


>U41105-3|AAX88810.1|  514|Caenorhabditis elegans Lysyl (k) trna
           synthetase protein1, isoform c protein.
          Length = 514

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -2

Query: 299 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 198
           ++G  P GG+G+G++R    L D  +I++V L+P
Sbjct: 460 EYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFP 493


>U41105-2|AAK68395.1|  596|Caenorhabditis elegans Lysyl (k) trna
           synthetase protein1, isoform b protein.
          Length = 596

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -2

Query: 299 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 198
           ++G  P GG+G+G++R    L D  +I++V L+P
Sbjct: 542 EYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFP 575


>U41105-1|AAA82396.1|  572|Caenorhabditis elegans Lysyl (k) trna
           synthetase protein1, isoform a protein.
          Length = 572

 Score = 34.3 bits (75), Expect = 0.10
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -2

Query: 299 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 198
           ++G  P GG+G+G++R    L D  +I++V L+P
Sbjct: 518 EYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFP 551


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +2

Query: 224 GTGPGASRGSAPNPARSRREAPSRT--CAGPYTSSTG*GR 337
           G+ P A  GS P P R +R+AP R+     P T S   GR
Sbjct: 319 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGR 358


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +2

Query: 224 GTGPGASRGSAPNPARSRREAPSRT--CAGPYTSSTG*GR 337
           G+ P A  GS P P R +R+AP R+     P T S   GR
Sbjct: 340 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGR 379


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +2

Query: 224 GTGPGASRGSAPNPARSRREAPSRT--CAGPYTSSTG*GR 337
           G+ P A  GS P P R +R+AP R+     P T S   GR
Sbjct: 325 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGR 364


>AC087735-1|AAK31560.2|   98|Caenorhabditis elegans Hypothetical
           protein Y35H6.3 protein.
          Length = 98

 Score = 31.1 bits (67), Expect = 0.93
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +3

Query: 132 RQNKDDTSSGRGAQGRAPL*EARVETHVPDVVPVQEPAEEALQTQPVAAVRHRA 293
           ++ K   SS       +P  E+ VE H+P    +QE  EE   T+P    R RA
Sbjct: 13  KERKRHQSSDYETSEISPGEESSVEDHIPSCSEMQEEIEELNSTKPTPKSRKRA 66


>Z99773-3|CAE11316.1|  305|Caenorhabditis elegans Hypothetical
           protein H06A10.2 protein.
          Length = 305

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +2

Query: 191 GSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTC-AGP 310
           G  G+  +PG    PGA+   A  P  ++   P + C AGP
Sbjct: 119 GKPGKPGKPGAPGAPGAAGKGASAPCEAKTPPPCQPCPAGP 159


>AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical
            protein Y105C5B.21b protein.
          Length = 1084

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 383  IWDHEELMEGYKHEGIDPSPYYWYTDQR 300
            +W H+EL +G+K  G+  + +Y  T +R
Sbjct: 966  MWQHKELHDGFKRSGLKEADFYSGTARR 993


>AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical
            protein Y105C5B.21a protein.
          Length = 1254

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 383  IWDHEELMEGYKHEGIDPSPYYWYTDQR 300
            +W H+EL +G+K  G+  + +Y  T +R
Sbjct: 1136 MWQHKELHDGFKRSGLKEADFYSGTARR 1163


>Z70208-2|CAA94136.1|  304|Caenorhabditis elegans Hypothetical
           protein F54B11.2 protein.
          Length = 304

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +2

Query: 191 GSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTC-AGP 310
           G  G+  +PG    PGA    A  P  ++   P + C AGP
Sbjct: 118 GKPGKPGKPGAPGNPGAPGKGAAVPCEAKTPPPCKPCPAGP 158


>Z81454-7|CAB76407.1|  378|Caenorhabditis elegans Hypothetical
           protein B0391.11 protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +3

Query: 576 LVEGSVFLRNVVGAEILYRFYIRHTFERFC 665
           ++E  +F+R+ +  E+L+R  IR +++ FC
Sbjct: 5   VLENPIFIRSCILYEVLHRKPIRESYKNFC 34


>AF125448-7|AAD12812.2|  302|Caenorhabditis elegans Cyclin c protein
           1 protein.
          Length = 302

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +3

Query: 585 GSVFLRNVVGAEILY--RFYIRHTFERFCGFLKFGLSSYTSC 704
           G    + V+   I+Y  RFY+R +F   C FL    + + +C
Sbjct: 63  GCKLRQQVIATAIIYFKRFYLRQSFRDMCPFLVASTALFLAC 104


>AC084159-12|ABO16466.1|  377|Caenorhabditis elegans F-box a protein
           protein 222 protein.
          Length = 377

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +3

Query: 576 LVEGSVFLRNVVGAEILYRFYIRHTFERFC 665
           ++E  +F+R+ +  E+L+R  IR +++ FC
Sbjct: 5   VLENPIFIRSCILNEVLHRKPIRESYKNFC 34


>U40942-2|AAC47072.2|  201|Caenorhabditis elegans Hypothetical
           protein K02E10.6 protein.
          Length = 201

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -2

Query: 242 WLLDRYHIRDVCLYPRFLERCTXLSASTRRRIVFILPDNMTL 117
           WL DRY+  D   Y    + C      T R+ +F   DNM +
Sbjct: 91  WLGDRYYYMDNYYYLATRDTCAYRMNETERQHLFYEEDNMPI 132


>Z68882-16|CAE17745.1|  118|Caenorhabditis elegans Hypothetical
           protein C47E12.13 protein.
          Length = 118

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +3

Query: 552 HFRDVLSKLVEGSVFLRNVVGAEILYRFY 638
           +FR+V++   EGS F R V G E +YRF+
Sbjct: 66  NFRNVIN---EGSKFFRKVFGHENVYRFH 91


>Z67990-1|CAA91932.1|  316|Caenorhabditis elegans Hypothetical
           protein F02D10.1 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
 Frame = +2

Query: 191 GSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTC-AGP 310
           G  G   +PG    PGAS   A  P       P + C AGP
Sbjct: 129 GKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQPCPAGP 169


>AL117202-24|CAD27612.1|  565|Caenorhabditis elegans Hypothetical
           protein Y47D3A.30 protein.
          Length = 565

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 636 YIRHTFERFCGFLKFGLSSYTSC 704
           Y ++TF +F GF KFG  S  SC
Sbjct: 539 YQKYTFTKFAGFGKFGKFSGHSC 561


>AF045646-2|AAK29827.1|  371|Caenorhabditis elegans Collagen protein
           103 protein.
          Length = 371

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +2

Query: 191 GSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTC-AGP 310
           G  G D  PG    PG++ G+  N A        +TC AGP
Sbjct: 149 GQAGLDGLPGAPGQPGSNGGAGSNGASEGSAGGCKTCPAGP 189


>AF016687-1|AAC48094.2|  315|Caenorhabditis elegans Dumpy : shorter
           than wild-typeprotein 9 protein.
          Length = 315

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
 Frame = +2

Query: 191 GSEGRDTRPGCGTGPG-----ASRGSAPNPARSRREAPSRTCAGPYT 316
           G +G D +PG G  PG      +RG A NP     + P      P T
Sbjct: 224 GGKGHDGKPGLGGQPGVRGAVGARGDAGNPGLPGPQGPKGEPGNPGT 270


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,343,995
Number of Sequences: 27780
Number of extensions: 322960
Number of successful extensions: 1146
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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