Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_L19
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical p... 244 4e-65
Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical pr... 81 7e-16
AL161712-18|CAC70140.1| 448|Caenorhabditis elegans Hypothetical... 75 6e-14
Z81497-3|CAB04081.2| 593|Caenorhabditis elegans Hypothetical pr... 40 0.003
U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna ... 34 0.10
U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna ... 34 0.10
U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna ... 34 0.10
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.93
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.93
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.93
AC087735-1|AAK31560.2| 98|Caenorhabditis elegans Hypothetical ... 31 0.93
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical... 29 2.9
AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical... 29 2.9
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81454-7|CAB76407.1| 378|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF125448-7|AAD12812.2| 302|Caenorhabditis elegans Cyclin c prot... 29 5.0
AC084159-12|ABO16466.1| 377|Caenorhabditis elegans F-box a prot... 29 5.0
U40942-2|AAC47072.2| 201|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z68882-16|CAE17745.1| 118|Caenorhabditis elegans Hypothetical p... 28 8.7
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 8.7
AL117202-24|CAD27612.1| 565|Caenorhabditis elegans Hypothetical... 28 8.7
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 8.7
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 28 8.7
>Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical
protein F22D6.3a protein.
Length = 545
Score = 244 bits (598), Expect = 4e-65
Identities = 107/160 (66%), Positives = 126/160 (78%)
Frame = -2
Query: 659 PFKRMTYIEAIEYLRANNITKEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIKS 480
PFKRM Y EAIE+L+ N++ E G + +GEDI E ER+MTD IGVPILL +FP IK+
Sbjct: 384 PFKRMPYKEAIEWLQKNDVRNEMGEKFVYGEDIAEAAERRMTDTIGVPILLNRFPHGIKA 443
Query: 479 FYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKHEGIDPSPYYWYTDQR 300
FYM RC DD LTESVD+LMPGVGEIVGGSMRIW ++L+ ++ G+D YYWY DQR
Sbjct: 444 FYMPRCADDNELTESVDLLMPGVGEIVGGSMRIWKEDQLLAAFEKGGLDSKNYYWYMDQR 503
Query: 299 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERC 180
K+GSVPHGGYGLGLERF+CWL D HIRDVCLYPRF+ RC
Sbjct: 504 KYGSVPHGGYGLGLERFICWLTDTNHIRDVCLYPRFVGRC 543
>Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical
protein B0464.1 protein.
Length = 531
Score = 81.4 bits (192), Expect = 7e-16
Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Frame = -2
Query: 662 EPFKRMTYIEAIEYLRANNITKEDGSFYEFGEDIPEMPERKMTDAIGVPI-LLCKFPAEI 486
EP + Y +AI LR N I E G + + + + + + +L KFP +
Sbjct: 371 EPPLILKYPDAITLLRENGI--EIGDEDDLSTPVEKFLGKLVKEKYSTDFYVLDKFPLSV 428
Query: 485 KSFYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKHEGIDPSPYYWYTD 306
+ FY D R + S D+ M G EI+ G+ RI D + L+E KH +D + Y D
Sbjct: 429 RPFYTMPDAHDERYSNSYDMFMRGE-EILSGAQRIHDADMLVERAKHHQVDLAKIQSYID 487
Query: 305 QRKFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYPRFLERCT 177
K+G PH G G+GLER L ++IR L+PR +R T
Sbjct: 488 SFKYGCPPHAGGGIGLERVTMLFLGLHNIRLASLFPRDPKRLT 530
>AL161712-18|CAC70140.1| 448|Caenorhabditis elegans Hypothetical
protein Y66D12A.23 protein.
Length = 448
Score = 74.9 bits (176), Expect = 6e-14
Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Frame = -2
Query: 656 FKRMTYIEAIEYL--RANNITKEDGSFYEFGEDIPEMPERKMTDAIGVPILLCKFPAEIK 483
F R+ Y EA+ L + + +T + G + D+ ++ + PI + +P K
Sbjct: 273 FPRIRYDEAVHLLALKGSKVTAKSGFSKKNELDLVKLHDDH-------PIFVTHYPVGQK 325
Query: 482 SFYMSRCVDDRRLTESVDVLMPGVGEIVGGSMRIWDHEELMEGYKHEGIDPSPYYWYTDQ 303
FYM+R D +LT S D+L+PG+GE+ GGS+R EEL + GID WY +
Sbjct: 326 PFYMAR---DGQLTLSFDLLVPGIGELAGGSLREQSAEELQR--RGCGID-----WYLEM 375
Query: 302 RKFGSVPHGGYGLGLERFLCWLL 234
R+ G P GG+G+G ER L +L+
Sbjct: 376 RRRGQPPTGGFGIGFERMLQYLI 398
>Z81497-3|CAB04081.2| 593|Caenorhabditis elegans Hypothetical
protein F10C2.6 protein.
Length = 593
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = -2
Query: 431 DVLMPGVGEIVGGSMRIWDHEELMEGYKHEGIDPSPYYWYTDQRKFGSVPHGGYGLGLER 252
D+++ GV E+ GGS+RI + E K G + G+ PHGG+ LGL+R
Sbjct: 479 DLVINGV-EMGGGSIRIENSEIQRHVLKVLGEPTDEMEHLLNALSHGAPPHGGFALGLDR 537
Query: 251 FLCWLLDRYH----IRDVCLYPR 195
F+ L + +RDV +P+
Sbjct: 538 FVAMLTSDGNPLTPVRDVIAFPK 560
>U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform c protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -2
Query: 299 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 198
++G P GG+G+G++R L D +I++V L+P
Sbjct: 460 EYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFP 493
>U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform b protein.
Length = 596
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -2
Query: 299 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 198
++G P GG+G+G++R L D +I++V L+P
Sbjct: 542 EYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFP 575
>U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform a protein.
Length = 572
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -2
Query: 299 KFGSVPHGGYGLGLERFLCWLLDRYHIRDVCLYP 198
++G P GG+G+G++R L D +I++V L+P
Sbjct: 518 EYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFP 551
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 224 GTGPGASRGSAPNPARSRREAPSRT--CAGPYTSSTG*GR 337
G+ P A GS P P R +R+AP R+ P T S GR
Sbjct: 319 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGR 358
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 224 GTGPGASRGSAPNPARSRREAPSRT--CAGPYTSSTG*GR 337
G+ P A GS P P R +R+AP R+ P T S GR
Sbjct: 340 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGR 379
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 224 GTGPGASRGSAPNPARSRREAPSRT--CAGPYTSSTG*GR 337
G+ P A GS P P R +R+AP R+ P T S GR
Sbjct: 325 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGR 364
>AC087735-1|AAK31560.2| 98|Caenorhabditis elegans Hypothetical
protein Y35H6.3 protein.
Length = 98
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 132 RQNKDDTSSGRGAQGRAPL*EARVETHVPDVVPVQEPAEEALQTQPVAAVRHRA 293
++ K SS +P E+ VE H+P +QE EE T+P R RA
Sbjct: 13 KERKRHQSSDYETSEISPGEESSVEDHIPSCSEMQEEIEELNSTKPTPKSRKRA 66
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 191 GSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTC-AGP 310
G G+ +PG PGA+ A P ++ P + C AGP
Sbjct: 119 GKPGKPGKPGAPGAPGAAGKGASAPCEAKTPPPCQPCPAGP 159
>AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical
protein Y105C5B.21b protein.
Length = 1084
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 383 IWDHEELMEGYKHEGIDPSPYYWYTDQR 300
+W H+EL +G+K G+ + +Y T +R
Sbjct: 966 MWQHKELHDGFKRSGLKEADFYSGTARR 993
>AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical
protein Y105C5B.21a protein.
Length = 1254
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 383 IWDHEELMEGYKHEGIDPSPYYWYTDQR 300
+W H+EL +G+K G+ + +Y T +R
Sbjct: 1136 MWQHKELHDGFKRSGLKEADFYSGTARR 1163
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 191 GSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTC-AGP 310
G G+ +PG PGA A P ++ P + C AGP
Sbjct: 118 GKPGKPGKPGAPGNPGAPGKGAAVPCEAKTPPPCKPCPAGP 158
>Z81454-7|CAB76407.1| 378|Caenorhabditis elegans Hypothetical
protein B0391.11 protein.
Length = 378
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +3
Query: 576 LVEGSVFLRNVVGAEILYRFYIRHTFERFC 665
++E +F+R+ + E+L+R IR +++ FC
Sbjct: 5 VLENPIFIRSCILYEVLHRKPIRESYKNFC 34
>AF125448-7|AAD12812.2| 302|Caenorhabditis elegans Cyclin c protein
1 protein.
Length = 302
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 585 GSVFLRNVVGAEILY--RFYIRHTFERFCGFLKFGLSSYTSC 704
G + V+ I+Y RFY+R +F C FL + + +C
Sbjct: 63 GCKLRQQVIATAIIYFKRFYLRQSFRDMCPFLVASTALFLAC 104
>AC084159-12|ABO16466.1| 377|Caenorhabditis elegans F-box a protein
protein 222 protein.
Length = 377
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +3
Query: 576 LVEGSVFLRNVVGAEILYRFYIRHTFERFC 665
++E +F+R+ + E+L+R IR +++ FC
Sbjct: 5 VLENPIFIRSCILNEVLHRKPIRESYKNFC 34
>U40942-2|AAC47072.2| 201|Caenorhabditis elegans Hypothetical
protein K02E10.6 protein.
Length = 201
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -2
Query: 242 WLLDRYHIRDVCLYPRFLERCTXLSASTRRRIVFILPDNMTL 117
WL DRY+ D Y + C T R+ +F DNM +
Sbjct: 91 WLGDRYYYMDNYYYLATRDTCAYRMNETERQHLFYEEDNMPI 132
>Z68882-16|CAE17745.1| 118|Caenorhabditis elegans Hypothetical
protein C47E12.13 protein.
Length = 118
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 552 HFRDVLSKLVEGSVFLRNVVGAEILYRFY 638
+FR+V++ EGS F R V G E +YRF+
Sbjct: 66 NFRNVIN---EGSKFFRKVFGHENVYRFH 91
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 191 GSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTC-AGP 310
G G +PG PGAS A P P + C AGP
Sbjct: 129 GKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQPCPAGP 169
>AL117202-24|CAD27612.1| 565|Caenorhabditis elegans Hypothetical
protein Y47D3A.30 protein.
Length = 565
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 636 YIRHTFERFCGFLKFGLSSYTSC 704
Y ++TF +F GF KFG S SC
Sbjct: 539 YQKYTFTKFAGFGKFGKFSGHSC 561
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 191 GSEGRDTRPGCGTGPGASRGSAPNPARSRREAPSRTC-AGP 310
G G D PG PG++ G+ N A +TC AGP
Sbjct: 149 GQAGLDGLPGAPGQPGSNGGAGSNGASEGSAGGCKTCPAGP 189
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Frame = +2
Query: 191 GSEGRDTRPGCGTGPG-----ASRGSAPNPARSRREAPSRTCAGPYT 316
G +G D +PG G PG +RG A NP + P P T
Sbjct: 224 GGKGHDGKPGLGGQPGVRGAVGARGDAGNPGLPGPQGPKGEPGNPGT 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,343,995
Number of Sequences: 27780
Number of extensions: 322960
Number of successful extensions: 1146
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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