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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L18
         (848 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)                  38   0.010
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)                34   0.13 
SB_17040| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.68 
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)                   32   0.68 
SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.68 
SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013)                    31   0.89 
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)                  31   0.89 
SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15)                  31   1.2  
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.6  
SB_40786| Best HMM Match : WSC (HMM E-Value=0.44)                      30   2.1  
SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3)                     29   4.8  
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)                    29   4.8  
SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   6.3  
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.3  
SB_24458| Best HMM Match : P60 (HMM E-Value=0.00014)                   28   8.3  
SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1)                     28   8.3  
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.3  

>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
          Length = 240

 Score = 37.9 bits (84), Expect = 0.010
 Identities = 44/156 (28%), Positives = 61/156 (39%)
 Frame = -2

Query: 652 DKPYEVKVKVPTPYTVEKKSLTK*KCPFPSPTLSRKRSQFQ*NTKLRCPNHTKSLRKCLT 473
           DKP +     P      K    +   P  S   S+K SQ       R  +   SL++ L 
Sbjct: 40  DKPEDKLEDKPKENQQNKPEDKQQTSPKTSRKTSKKTSQKTSLNASRKTSRRTSLKRSLK 99

Query: 472 KSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKC 293
            S    T P      SL  S   SP   P TS   +   SP TSP  S   SP ++  K 
Sbjct: 100 TSP--KTSPKTMRMKSLKTSPKTSPEIGPRTSPKTSSKTSPKTSPKSSPKTSP-KTSSKT 156

Query: 292 QYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTR 185
             +   K+S  +   + R+  +K + L TSP  S +
Sbjct: 157 SLKTSQKTSLNASRKTSRRTSLK-RSLKTSPKTSRK 191


>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
          Length = 620

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
 Frame = -2

Query: 469 SKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPI--RSPLK 296
           S   S+ P   +    +PS L SP+  P TS  P    SPLTS +     SP+   SPL 
Sbjct: 171 SPLTSSSPLTSSSPLTSPSPLTSPS--PLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPLT 228

Query: 295 CQYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPTRST 188
                 + S   S +P      + S   LTSP+  T
Sbjct: 229 SPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPLT 264



 Score = 28.3 bits (60), Expect = 8.3
 Identities = 29/111 (26%), Positives = 42/111 (37%)
 Frame = -2

Query: 643 YEVKVKVPTPYTVEKKSLTK*KCPFPSPTLSRKRSQFQ*NTKLRCPNHTKSLRKCLTKSK 464
           + +    P+P T     LT    P  SP+     S    ++ L   +   S     + S 
Sbjct: 163 FSISAYFPSPLT-SSSPLTS-SSPLTSPSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSP 220

Query: 463 YQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPI 311
             S+ P        + S L S +  P TS  P    SPLTSP+     SP+
Sbjct: 221 LTSSSPLTSPSPLTSSSPLTSSS--PLTSSSPLTSSSPLTSPSPLTSPSPL 269



 Score = 28.3 bits (60), Expect = 8.3
 Identities = 20/58 (34%), Positives = 27/58 (46%)
 Frame = -2

Query: 475 TKSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSP 302
           + S   S+ P   +    +PS L S +  P TS  P    SPLTS +     SP+ SP
Sbjct: 211 SSSPLTSSSPLTSSSPLTSPSPLTSSS--PLTSSSPLTSSSPLTSSSPLTSPSPLTSP 266


>SB_17040| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 358

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 2/150 (1%)
 Frame = -2

Query: 679 STL*SQVRVDKPYEVKVKVPTPYTVEKKSLTK*KCPFPSPTLSRKRSQFQ*NTKLRCPNH 500
           +T+ SQ +V      + KVP   T  +K         P+   SR++      ++ + PN 
Sbjct: 90  NTVTSQRKVPNMVSSRRKVPNTVTSRRK--------VPNMVTSRRKVPNMVTSRRKVPNM 141

Query: 499 TKSLRKCLTKSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*R 320
             S RK       Q   P M T     P+ML S  + P       K+ + +TS  R K  
Sbjct: 142 VNSRRKVSNMVTGQRKFPNMLTSRRKVPNMLTSRRKVPNMVTSRRKVPNMVTS--RRKVP 199

Query: 319 SPIRSPLKCQYQNLTKSSRK--SLTPSKRK 236
           + + S  K    N+  S RK  ++  S+RK
Sbjct: 200 NMVTSRRK--VPNMVTSRRKIPNMVTSRRK 227


>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
          Length = 638

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 25/84 (29%), Positives = 40/84 (47%)
 Frame = -2

Query: 427 SLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTP 248
           S++P + K   Q    S+ P +  S   SP R K RSP RSP K +  + +     S +P
Sbjct: 171 SVSPPIYKGREQ--LKSKSPKRTWS--NSPFRHKSRSPFRSPQKERIPHQSPERLPSWSP 226

Query: 247 SKRKCLMKSKCLLTSPTRSTRKFK 176
            ++    K+   L+ P RS   ++
Sbjct: 227 VRQSPFNKTHRRLSPPRRSPSPYR 250


>SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 865

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 20/58 (34%), Positives = 31/58 (53%)
 Frame = -2

Query: 472 KSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPL 299
           +++  S  P +YT  S+TP  + SP Q    S  P++ ++  TS  R+    PIR PL
Sbjct: 606 RTRAWSVSPRLYTPKSITPKFILSPRQ--TLSAPPSRPKTAPTSAQRTP--EPIRKPL 659


>SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013)
          Length = 340

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = -2

Query: 421 TPSMLKSPTQ*-PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPS 245
           TP+  K P+   P+ S  PTK   P  S   +K   P +S    +    TKS++ + +  
Sbjct: 146 TPTSTKQPSSSRPFKSTKPTKSTKPTKSTKATKSTKPTKSTKPTKPTKPTKSTKPTKSTK 205

Query: 244 KRKCLMKSKCLLTSPT 197
             K    ++   T+PT
Sbjct: 206 PTKSTKPTESKPTAPT 221


>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
          Length = 765

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
 Frame = -2

Query: 415 SMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTK--SSRKSLTP-- 248
           S  +SP +   +S C  +     +   +S+ RS  RSP + +Y++ ++    R+S +P  
Sbjct: 301 SKSRSPRRYRDSSSCRRRRSRSRSRSPKSRLRSRSRSPYRIRYRSRSRPPRGRRSQSPRR 360

Query: 247 ------SKRKCLMKSKCLLTSPTRS 191
                 S+R+C  KS  + +SP +S
Sbjct: 361 RRTRSRSRRRCRSKSSSIASSPDKS 385


>SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15)
          Length = 1605

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
 Frame = +3

Query: 186  LVDRVGLVNRHFDFIR--HFLFD--GVRDFLDDFVRFWYWHFNGDRIGLLYFDLVGLVNG 353
            +VD VGL +   D++   H + D  G+   + D+V   +   +   +G    D VGL N 
Sbjct: 811  VVDWVGLGHSVVDWVGLGHLVVDWVGLGHSVVDWVGLGHSVVDYVGLGHSVVDYVGLGNS 870

Query: 354  DLNFVGHWLVYGHWVGLFN--MDGVRLRHVYIVGPVDWYFDFVRHFLNDFVWLGH 512
             +++VG       WVGL N  +D V L H      VDW    + H + D+V LG+
Sbjct: 871  VVDWVGLGHSVVDWVGLGNSVLDWVGLGH----SVVDWV--GLGHSVVDYVGLGN 919


>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -2

Query: 421 TPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQY 287
           TP +   PT  P  S+ P   R  L +PTR+    PI SP + Q+
Sbjct: 76  TPVLPSPPTNTPRPSRIPRLKRRRLQTPTRTTTLPPIHSPPQDQH 120


>SB_40786| Best HMM Match : WSC (HMM E-Value=0.44)
          Length = 230

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 21/71 (29%), Positives = 34/71 (47%)
 Frame = -2

Query: 445 TMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSS 266
           T+ T L  TP+  K P+  P  +  PT+   P  SPTR      + S L CQ   ++  +
Sbjct: 128 TLPTTLPTTPTPTKRPSPSPTGTGTPTRKPEPTLSPTR------MLSGLLCQSFVVSLCT 181

Query: 265 RKSLTPSKRKC 233
           R+  +  ++ C
Sbjct: 182 RQDTSGMEQPC 192


>SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3)
          Length = 171

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 421 TPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQY 287
           TP +   PT  P  S+ P   R  L +PT+     PI SP + Q+
Sbjct: 117 TPLLPSPPTNTPRPSRIPRLKRRRLQTPTKRSTLPPIHSPPQDQH 161


>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
          Length = 170

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 421 TPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQY 287
           TP +   PT  P  S  P   R  L +PT++    PI SP + Q+
Sbjct: 116 TPLLPSPPTSTPRPSHIPRLKRRRLQTPTKTTTLPPIHSPPQDQH 160


>SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 587

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 11/90 (12%)
 Frame = -1

Query: 797 PYXXKVPXPXPYTVEK-------KFPLPSXIRQXPSIRT--*PYTVKRKYLMKSSPR*QA 645
           P   KVP P PY V          +P+P  +RQ P I+    P  V R   +   P    
Sbjct: 467 PQIEKVPIPFPYPVPSPPQIKPMPYPVPVPVRQPPMIQRFYYPVPVSRPGQIHHIPYPIY 526

Query: 644 LRSQSQSAHSLH--R*EEIPYEVKVPVPQP 561
           +R  ++  H  +       P +V  PVP P
Sbjct: 527 IRGPAEVRHVPYPVPIRSPPEQVPFPVPSP 556


>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1680

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
 Frame = -2

Query: 460 QSTGPTMYTCLSLTPSMLKSPTQ*--PYTSQCPTKLRSPLTSP--TRSK*RSPIRSPLKC 293
           Q+  PT     +  P+   +PTQ   P  +  PT+ + P+ SP  T+++  +P  +P + 
Sbjct: 720 QNPAPTPAPTQAQNPAPTPAPTQAQNPAPTPAPTQAQPPVPSPAPTQAQPPAPSPAPTQA 779

Query: 292 QYQNLTKSSRKSLTPSKRK 236
             Q +   ++ +   +++K
Sbjct: 780 LLQTMANQTQPATATAEQK 798


>SB_24458| Best HMM Match : P60 (HMM E-Value=0.00014)
          Length = 351

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -2

Query: 367 TKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSK 218
           TK + P T  T++K RS  R  LKC    L  +  K +   KRK    SK
Sbjct: 62  TKSKEPETDGTQNK-RSRKRKLLKCDQLLLPDTRLKPIGSKKRKVKQSSK 110


>SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1)
          Length = 2568

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 372  HWLVYGHWVGLFNMDGVRLRHVYIVGPVDWY 464
            +WL+ G W  +FN   V++    I GP + Y
Sbjct: 1720 YWLLEGAWPAVFNRAAVQMHGELIEGPREGY 1750


>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1272

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -2

Query: 388  PYTSQCPTKLR-SPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRK--SLTPSKRKCLMK 224
            P  S  P + R SP  SP R + RSP  SP   +   L    RK  S  PS R+   K
Sbjct: 913  PTPSPPPRRRRKSPSPSPPRRRRRSPSNSPPPMRSSPLPPPQRKRASTPPSPRRARRK 970


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,196,913
Number of Sequences: 59808
Number of extensions: 382252
Number of successful extensions: 1059
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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