BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_L18 (848 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 38 0.010 SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 34 0.13 SB_17040| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.68 SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 32 0.68 SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.68 SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013) 31 0.89 SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 31 0.89 SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15) 31 1.2 SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6 SB_40786| Best HMM Match : WSC (HMM E-Value=0.44) 30 2.1 SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3) 29 4.8 SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 29 4.8 SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3 SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3 SB_24458| Best HMM Match : P60 (HMM E-Value=0.00014) 28 8.3 SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1) 28 8.3 SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3 >SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) Length = 240 Score = 37.9 bits (84), Expect = 0.010 Identities = 44/156 (28%), Positives = 61/156 (39%) Frame = -2 Query: 652 DKPYEVKVKVPTPYTVEKKSLTK*KCPFPSPTLSRKRSQFQ*NTKLRCPNHTKSLRKCLT 473 DKP + P K + P S S+K SQ R + SL++ L Sbjct: 40 DKPEDKLEDKPKENQQNKPEDKQQTSPKTSRKTSKKTSQKTSLNASRKTSRRTSLKRSLK 99 Query: 472 KSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKC 293 S T P SL S SP P TS + SP TSP S SP ++ K Sbjct: 100 TSP--KTSPKTMRMKSLKTSPKTSPEIGPRTSPKTSSKTSPKTSPKSSPKTSP-KTSSKT 156 Query: 292 QYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPTRSTR 185 + K+S + + R+ +K + L TSP S + Sbjct: 157 SLKTSQKTSLNASRKTSRRTSLK-RSLKTSPKTSRK 191 >SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) Length = 620 Score = 34.3 bits (75), Expect = 0.13 Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 2/96 (2%) Frame = -2 Query: 469 SKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPI--RSPLK 296 S S+ P + +PS L SP+ P TS P SPLTS + SP+ SPL Sbjct: 171 SPLTSSSPLTSSSPLTSPSPLTSPS--PLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPLT 228 Query: 295 CQYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPTRST 188 + S S +P + S LTSP+ T Sbjct: 229 SPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPLT 264 Score = 28.3 bits (60), Expect = 8.3 Identities = 29/111 (26%), Positives = 42/111 (37%) Frame = -2 Query: 643 YEVKVKVPTPYTVEKKSLTK*KCPFPSPTLSRKRSQFQ*NTKLRCPNHTKSLRKCLTKSK 464 + + P+P T LT P SP+ S ++ L + S + S Sbjct: 163 FSISAYFPSPLT-SSSPLTS-SSPLTSPSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSP 220 Query: 463 YQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPI 311 S+ P + S L S + P TS P SPLTSP+ SP+ Sbjct: 221 LTSSSPLTSPSPLTSSSPLTSSS--PLTSSSPLTSSSPLTSPSPLTSPSPL 269 Score = 28.3 bits (60), Expect = 8.3 Identities = 20/58 (34%), Positives = 27/58 (46%) Frame = -2 Query: 475 TKSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSP 302 + S S+ P + +PS L S + P TS P SPLTS + SP+ SP Sbjct: 211 SSSPLTSSSPLTSSSPLTSPSPLTSSS--PLTSSSPLTSSSPLTSSSPLTSPSPLTSP 266 >SB_17040| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 358 Score = 31.9 bits (69), Expect = 0.68 Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 2/150 (1%) Frame = -2 Query: 679 STL*SQVRVDKPYEVKVKVPTPYTVEKKSLTK*KCPFPSPTLSRKRSQFQ*NTKLRCPNH 500 +T+ SQ +V + KVP T +K P+ SR++ ++ + PN Sbjct: 90 NTVTSQRKVPNMVSSRRKVPNTVTSRRK--------VPNMVTSRRKVPNMVTSRRKVPNM 141 Query: 499 TKSLRKCLTKSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*R 320 S RK Q P M T P+ML S + P K+ + +TS R K Sbjct: 142 VNSRRKVSNMVTGQRKFPNMLTSRRKVPNMLTSRRKVPNMVTSRRKVPNMVTS--RRKVP 199 Query: 319 SPIRSPLKCQYQNLTKSSRK--SLTPSKRK 236 + + S K N+ S RK ++ S+RK Sbjct: 200 NMVTSRRK--VPNMVTSRRKIPNMVTSRRK 227 >SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) Length = 638 Score = 31.9 bits (69), Expect = 0.68 Identities = 25/84 (29%), Positives = 40/84 (47%) Frame = -2 Query: 427 SLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTP 248 S++P + K Q S+ P + S SP R K RSP RSP K + + + S +P Sbjct: 171 SVSPPIYKGREQ--LKSKSPKRTWS--NSPFRHKSRSPFRSPQKERIPHQSPERLPSWSP 226 Query: 247 SKRKCLMKSKCLLTSPTRSTRKFK 176 ++ K+ L+ P RS ++ Sbjct: 227 VRQSPFNKTHRRLSPPRRSPSPYR 250 >SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 865 Score = 31.9 bits (69), Expect = 0.68 Identities = 20/58 (34%), Positives = 31/58 (53%) Frame = -2 Query: 472 KSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPL 299 +++ S P +YT S+TP + SP Q S P++ ++ TS R+ PIR PL Sbjct: 606 RTRAWSVSPRLYTPKSITPKFILSPRQ--TLSAPPSRPKTAPTSAQRTP--EPIRKPL 659 >SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013) Length = 340 Score = 31.5 bits (68), Expect = 0.89 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = -2 Query: 421 TPSMLKSPTQ*-PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPS 245 TP+ K P+ P+ S PTK P S +K P +S + TKS++ + + Sbjct: 146 TPTSTKQPSSSRPFKSTKPTKSTKPTKSTKATKSTKPTKSTKPTKPTKPTKSTKPTKSTK 205 Query: 244 KRKCLMKSKCLLTSPT 197 K ++ T+PT Sbjct: 206 PTKSTKPTESKPTAPT 221 >SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) Length = 765 Score = 31.5 bits (68), Expect = 0.89 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 10/85 (11%) Frame = -2 Query: 415 SMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTK--SSRKSLTP-- 248 S +SP + +S C + + +S+ RS RSP + +Y++ ++ R+S +P Sbjct: 301 SKSRSPRRYRDSSSCRRRRSRSRSRSPKSRLRSRSRSPYRIRYRSRSRPPRGRRSQSPRR 360 Query: 247 ------SKRKCLMKSKCLLTSPTRS 191 S+R+C KS + +SP +S Sbjct: 361 RRTRSRSRRRCRSKSSSIASSPDKS 385 >SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15) Length = 1605 Score = 31.1 bits (67), Expect = 1.2 Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 6/115 (5%) Frame = +3 Query: 186 LVDRVGLVNRHFDFIR--HFLFD--GVRDFLDDFVRFWYWHFNGDRIGLLYFDLVGLVNG 353 +VD VGL + D++ H + D G+ + D+V + + +G D VGL N Sbjct: 811 VVDWVGLGHSVVDWVGLGHLVVDWVGLGHSVVDWVGLGHSVVDYVGLGHSVVDYVGLGNS 870 Query: 354 DLNFVGHWLVYGHWVGLFN--MDGVRLRHVYIVGPVDWYFDFVRHFLNDFVWLGH 512 +++VG WVGL N +D V L H VDW + H + D+V LG+ Sbjct: 871 VVDWVGLGHSVVDWVGLGNSVLDWVGLGH----SVVDWV--GLGHSVVDYVGLGN 919 >SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 130 Score = 30.7 bits (66), Expect = 1.6 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -2 Query: 421 TPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQY 287 TP + PT P S+ P R L +PTR+ PI SP + Q+ Sbjct: 76 TPVLPSPPTNTPRPSRIPRLKRRRLQTPTRTTTLPPIHSPPQDQH 120 >SB_40786| Best HMM Match : WSC (HMM E-Value=0.44) Length = 230 Score = 30.3 bits (65), Expect = 2.1 Identities = 21/71 (29%), Positives = 34/71 (47%) Frame = -2 Query: 445 TMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSS 266 T+ T L TP+ K P+ P + PT+ P SPTR + S L CQ ++ + Sbjct: 128 TLPTTLPTTPTPTKRPSPSPTGTGTPTRKPEPTLSPTR------MLSGLLCQSFVVSLCT 181 Query: 265 RKSLTPSKRKC 233 R+ + ++ C Sbjct: 182 RQDTSGMEQPC 192 >SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3) Length = 171 Score = 29.1 bits (62), Expect = 4.8 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -2 Query: 421 TPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQY 287 TP + PT P S+ P R L +PT+ PI SP + Q+ Sbjct: 117 TPLLPSPPTNTPRPSRIPRLKRRRLQTPTKRSTLPPIHSPPQDQH 161 >SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) Length = 170 Score = 29.1 bits (62), Expect = 4.8 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = -2 Query: 421 TPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQY 287 TP + PT P S P R L +PT++ PI SP + Q+ Sbjct: 116 TPLLPSPPTSTPRPSHIPRLKRRRLQTPTKTTTLPPIHSPPQDQH 160 >SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 587 Score = 28.7 bits (61), Expect = 6.3 Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 11/90 (12%) Frame = -1 Query: 797 PYXXKVPXPXPYTVEK-------KFPLPSXIRQXPSIRT--*PYTVKRKYLMKSSPR*QA 645 P KVP P PY V +P+P +RQ P I+ P V R + P Sbjct: 467 PQIEKVPIPFPYPVPSPPQIKPMPYPVPVPVRQPPMIQRFYYPVPVSRPGQIHHIPYPIY 526 Query: 644 LRSQSQSAHSLH--R*EEIPYEVKVPVPQP 561 +R ++ H + P +V PVP P Sbjct: 527 IRGPAEVRHVPYPVPIRSPPEQVPFPVPSP 556 >SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1680 Score = 28.3 bits (60), Expect = 8.3 Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 4/79 (5%) Frame = -2 Query: 460 QSTGPTMYTCLSLTPSMLKSPTQ*--PYTSQCPTKLRSPLTSP--TRSK*RSPIRSPLKC 293 Q+ PT + P+ +PTQ P + PT+ + P+ SP T+++ +P +P + Sbjct: 720 QNPAPTPAPTQAQNPAPTPAPTQAQNPAPTPAPTQAQPPVPSPAPTQAQPPAPSPAPTQA 779 Query: 292 QYQNLTKSSRKSLTPSKRK 236 Q + ++ + +++K Sbjct: 780 LLQTMANQTQPATATAEQK 798 >SB_24458| Best HMM Match : P60 (HMM E-Value=0.00014) Length = 351 Score = 28.3 bits (60), Expect = 8.3 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = -2 Query: 367 TKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSK 218 TK + P T T++K RS R LKC L + K + KRK SK Sbjct: 62 TKSKEPETDGTQNK-RSRKRKLLKCDQLLLPDTRLKPIGSKKRKVKQSSK 110 >SB_22517| Best HMM Match : UPF0081 (HMM E-Value=1) Length = 2568 Score = 28.3 bits (60), Expect = 8.3 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +3 Query: 372 HWLVYGHWVGLFNMDGVRLRHVYIVGPVDWY 464 +WL+ G W +FN V++ I GP + Y Sbjct: 1720 YWLLEGAWPAVFNRAAVQMHGELIEGPREGY 1750 >SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1272 Score = 28.3 bits (60), Expect = 8.3 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 3/58 (5%) Frame = -2 Query: 388 PYTSQCPTKLR-SPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRK--SLTPSKRKCLMK 224 P S P + R SP SP R + RSP SP + L RK S PS R+ K Sbjct: 913 PTPSPPPRRRRKSPSPSPPRRRRRSPSNSPPPMRSSPLPPPQRKRASTPPSPRRARRK 970 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,196,913 Number of Sequences: 59808 Number of extensions: 382252 Number of successful extensions: 1059 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 900 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1034 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2407378809 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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