Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_L18
(848 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 33 0.34
AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical... 31 1.0
Z81453-7|CAB03797.2| 457|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF264764-1|AAQ14296.1| 457|Caenorhabditis elegans sterol reduct... 29 3.2
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 29 3.2
U29381-10|AAA68748.1| 136|Caenorhabditis elegans Hypothetical p... 28 7.3
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 32.7 bits (71), Expect = 0.34
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = -2
Query: 475 TKSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTR-SK*RSPIRSPL 299
T K T PT T + TP+ +PT T PT ++S T+PT + +S +P
Sbjct: 368 TTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 427
Query: 298 KCQYQNLTKSSRKS--LTPSKRK 236
+ T S+ KS TP+ K
Sbjct: 428 TMKSTPTTPSTMKSSPTTPTTMK 450
Score = 31.9 bits (69), Expect = 0.59
Identities = 22/75 (29%), Positives = 30/75 (40%)
Frame = -2
Query: 475 TKSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLK 296
T K T PT T + TP+ + P T PT ++S T+PT K S +K
Sbjct: 381 TTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPSTMK 440
Query: 295 CQYQNLTKSSRKSLT 251
T S+T
Sbjct: 441 SSPTTPTTMKTSSIT 455
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -2
Query: 475 TKSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPT 335
T K T PT T + TP+ +PT T PT ++S T+PT
Sbjct: 254 TTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPT 300
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -2
Query: 508 PNHTKSLRKCLTKSKYQSTGPTMYTCLSLTPSMLKSPT---Q*PYTSQCPTKLRSPLTSP 338
P KS T K T PT T + TP+ +PT P T PT ++S T+P
Sbjct: 165 PTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTP 224
Query: 337 T 335
T
Sbjct: 225 T 225
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -2
Query: 508 PNHTKSLRKCLTKSKYQSTGPTMYTCLSLTPSMLKSPT---Q*PYTSQCPTKLRSPLTSP 338
P KS T K T PT T + TP+ +PT P T PT ++S T+P
Sbjct: 279 PTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTP 338
Query: 337 T 335
T
Sbjct: 339 T 339
Score = 29.9 bits (64), Expect = 2.4
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Frame = -2
Query: 475 TKSKYQSTGPTMYTCLSLTPSMLKSPT---Q*PYTSQCPTKLRSPLTSPT-----RSK*R 320
T K T PT T + TP+ +PT P T PT ++S T+PT +S
Sbjct: 215 TTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 274
Query: 319 SPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKCLLTSPTRST 188
+P +P + T ++ KS TP+ K T+PT T
Sbjct: 275 TP-TTPTTMKSTPTTPTTMKS-TPTTPTTPTTMKSTPTTPTTPT 316
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -2
Query: 475 TKSKYQSTGPTMYTCLSLTPSMLKSPT---Q*PYTSQCPTKLRSPLTSPTRSK 326
T K T PT T + TP+ +PT P T PT ++S T+PT K
Sbjct: 355 TTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMK 407
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = -2
Query: 508 PNHTKSLRKCLTKSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRS 329
P KS T + PT T + TP+ +PT T PT ++S T+P+
Sbjct: 380 PTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPSTM 439
Query: 328 K 326
K
Sbjct: 440 K 440
Score = 29.1 bits (62), Expect = 4.2
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 3/99 (3%)
Frame = -2
Query: 622 PTPYTVEKKSLTK*KCPFPSPTLSRKRSQFQ*NTKLRCPNHTKSLRKCLTKSKYQSTGPT 443
PTP T++ T T + +S T T + T K T PT
Sbjct: 153 PTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 212
Query: 442 MYTCLSLTPSMLKSPT---Q*PYTSQCPTKLRSPLTSPT 335
T + TP+ +PT P T PT ++S T+PT
Sbjct: 213 TPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 251
Score = 29.1 bits (62), Expect = 4.2
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Frame = -2
Query: 475 TKSKYQSTGPTMYTCLSLTPSMLKSPT---Q*PYTSQCPTKLRSPLTSPTR-SK*RSPIR 308
T K T PT T + TP+ +PT P T PT ++S T+PT + +S
Sbjct: 228 TTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPT 287
Query: 307 SPLKCQYQNLTKSSRKSL--TPSKRKCLMKSKCLLTSPTRST 188
+P + T ++ ++ TP+ K T+PT T
Sbjct: 288 TPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT 329
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -2
Query: 475 TKSKYQSTGPTMYTCLSLTPSMLKSPT---Q*PYTSQCPTKLRSPLTSPT 335
T K T PT T + TP+ +PT P T PT ++S T+PT
Sbjct: 303 TTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 352
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -2
Query: 475 TKSKYQSTGPTMYTCLSLTPSMLKSPT---Q*PYTSQCPTKLRSPLTSPT 335
T K T PT T + TP+ +PT P T PT ++S T+PT
Sbjct: 316 TTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 365
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -2
Query: 475 TKSKYQSTGPTMYTCLSLTPSMLKSPT---Q*PYTSQCPTKLRSPLTSPT 335
T K T PT T + TP+ +PT P T PT ++S T+PT
Sbjct: 329 TTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 378
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -2
Query: 475 TKSKYQSTGPTMYTCLSLTPSMLKSPT---Q*PYTSQCPTKLRSPLTSPT 335
T K T PT T + TP+ +PT P T PT ++S T+PT
Sbjct: 342 TTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 391
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = -2
Query: 508 PNHTKSLRKCLTKSKYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQCPTKLRSPLTSPTRS 329
P KS T K T PT T + TP+ +PT T P+ ++S T+PT
Sbjct: 393 PTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPT---TPTTMKSTPTTPSTMKSSPTTPTTM 449
Query: 328 K 326
K
Sbjct: 450 K 450
>AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical
protein Y119C1B.1 protein.
Length = 273
Score = 31.1 bits (67), Expect = 1.0
Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 1/132 (0%)
Frame = -2
Query: 565 SPTLSRKRSQFQ*NTKLRCPNHTKSLRKCL-TKSKYQSTGPTMYTCLSLTPSMLKSPTQ* 389
S L +K+ + + ++ P H R +S Y +TG + Y+ S P KS
Sbjct: 145 STKLEKKKCSIR-SEDIKTPRHDSEYRPTNEVRSVYVATGQSTYSKPS-KPENDKSYYSV 202
Query: 388 PYTSQCPTKLRSPLTSPTRSK*RSPIRSPLKCQYQNLTKSSRKSLTPSKRKCLMKSKCLL 209
P + +K + L S +K L SSRK+ PSK+ SK L
Sbjct: 203 PSKDKSTSKKQKMLRSDMADSASPKSLKKIKSSKDPLRSSSRKTTKPSKKLSGRSSKKNL 262
Query: 208 TSPTRSTRKFKC 173
S +S ++ C
Sbjct: 263 AS-KKSKKRSMC 273
>Z81453-7|CAB03797.2| 457|Caenorhabditis elegans Hypothetical
protein B0250.9 protein.
Length = 457
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 519 FVFHWNWDLFLDSVGLGNGHFHFVR 593
F FHWN DLFL+S+ F F R
Sbjct: 264 FQFHWNEDLFLNSLDSKRCDFGFYR 288
>AF264764-1|AAQ14296.1| 457|Caenorhabditis elegans sterol reductase
protein.
Length = 457
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 519 FVFHWNWDLFLDSVGLGNGHFHFVR 593
F FHWN DLFL+S+ F F R
Sbjct: 264 FQFHWNEDLFLNSLDSKRCDFGFYR 288
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 203 PYPVYKEVQVPLVKEVPYPVKYHVPI 126
P PV + V VP+ +VP P++ VP+
Sbjct: 149 PQPVIQHVPVPVPVQVPVPIRVPVPV 174
>U29381-10|AAA68748.1| 136|Caenorhabditis elegans Hypothetical
protein F35D11.1 protein.
Length = 136
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 466 KYQSTGPTMYTCLSLTPSMLKSPTQ*PYTSQC 371
KY + T C+ +T M K T PY S+C
Sbjct: 40 KYNNNCETNVFCVKITEPMTKEATYEPYRSEC 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,160,449
Number of Sequences: 27780
Number of extensions: 278721
Number of successful extensions: 837
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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