BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_T7_L18 (848 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 24 1.5 DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 24 1.5 DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 24 1.5 DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 24 1.5 AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 24 1.5 DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 2.7 >DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex determiner protein. Length = 177 Score = 24.2 bits (50), Expect = 1.5 Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 3/27 (11%) Frame = -1 Query: 191 YKEVQ---VPLVKEVPYPVKYHVPIYF 120 YK++Q + ++++P PV VP+Y+ Sbjct: 97 YKKLQYYNINYIEQIPVPVPVPVPVYY 123 >DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex determiner protein. Length = 177 Score = 24.2 bits (50), Expect = 1.5 Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 3/27 (11%) Frame = -1 Query: 191 YKEVQ---VPLVKEVPYPVKYHVPIYF 120 YK++Q + ++++P PV VP+Y+ Sbjct: 97 YKKLQYYNINYIEQIPVPVPVPVPVYY 123 >DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex determiner protein. Length = 176 Score = 24.2 bits (50), Expect = 1.5 Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 3/27 (11%) Frame = -1 Query: 191 YKEVQ---VPLVKEVPYPVKYHVPIYF 120 YK++Q + ++++P PV VP+Y+ Sbjct: 97 YKKLQYYNINYIEQIPVPVPIPVPVYY 123 >DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex determiner protein. Length = 177 Score = 24.2 bits (50), Expect = 1.5 Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 3/27 (11%) Frame = -1 Query: 191 YKEVQ---VPLVKEVPYPVKYHVPIYF 120 YK++Q + ++++P PV VP+Y+ Sbjct: 97 YKKLQYYNINYIEQIPVPVPVPVPVYY 123 >AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex determiner protein. Length = 410 Score = 24.2 bits (50), Expect = 1.5 Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 3/27 (11%) Frame = -1 Query: 191 YKEVQ---VPLVKEVPYPVKYHVPIYF 120 YK++Q + ++++P PV VP+Y+ Sbjct: 330 YKKLQYYNINYIEQIPVPVPVPVPVYY 356 >DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine receptor beta1subunit protein. Length = 520 Score = 23.4 bits (48), Expect = 2.7 Identities = 7/19 (36%), Positives = 13/19 (68%) Frame = +3 Query: 276 VRFWYWHFNGDRIGLLYFD 332 ++F W FNGD++ L ++ Sbjct: 167 MKFGSWTFNGDQVSLALYN 185 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 174,262 Number of Sequences: 438 Number of extensions: 3815 Number of successful extensions: 24 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 24 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 27309825 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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