Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_T7_L17
         (875 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       28   0.11 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.6  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = -3

Query: 330 VSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLE--TEKDKGLE--GLDTEMIS 163
           ++P   EPL        E + E + TPC   N+  D + +     +  LE  GL +   S
Sbjct: 106 LTPPNSEPLVSPKSEKEEKDMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLFSSKTS 165

Query: 162 EDEGNEMFSEED 127
           E   +E+  + D
Sbjct: 166 EHSVDELSGKSD 177


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -3

Query: 249 CLDENKSKDTSLETEKDKGLEGLDTEMI-SEDEGNEMFSE 133
           CLD +K+K+T+LE       E L   +  +EDE    +S+
Sbjct: 309 CLDLSKTKETNLEKSNLNHNEQLRKYLCKNEDETKNHYSK 348


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -3

Query: 249 CLDENKSKDTSLETEKDKGLEGLDTEMI-SEDEGNEMFSE 133
           CLD +K+K+T+LE       E L   +  +EDE    +S+
Sbjct: 201 CLDLSKTKETNLEKSNLNHNEQLRKYLCKNEDETKNHYSK 240


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = -3

Query: 243 DENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFSEEDKPK 118
           D+   ++   E  +DK  +    E + EDE  +   E+ K K
Sbjct: 225 DDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKK 266


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -3

Query: 249 CLDENKSKDTSLETEKDKGLEGLDTEMISED 157
           C DE+     ++ET+ ++ L+   T+ +  D
Sbjct: 134 CKDESDENSCTVETDPNRALDCDPTQCVLPD 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,918
Number of Sequences: 336
Number of extensions: 2191
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)