Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_T7_L17
(875 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0357 + 14852584-14853058,14853116-14855754 33 0.30
03_06_0195 + 32256771-32258792 33 0.30
01_01_1189 + 9454042-9455655 33 0.30
12_01_0618 - 5099021-5099668,5099701-5100221,5100311-5100352,510... 31 1.2
11_01_0678 - 5534879-5534883,5535430-5535529,5535638-5535799,553... 30 2.1
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 29 3.7
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 29 3.7
10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442... 29 4.9
07_03_1228 - 25009736-25010965 29 6.5
07_01_0739 + 5631034-5631166,5631246-5631682,5632455-5632574 29 6.5
06_01_0505 + 3639867-3640301,3640386-3640792,3641024-3641609,364... 29 6.5
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 28 8.5
02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783 28 8.5
01_01_0450 - 3344203-3344259,3344339-3344506,3344743-3344956,334... 28 8.5
>04_03_0357 + 14852584-14853058,14853116-14855754
Length = 1037
Score = 33.1 bits (72), Expect = 0.30
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = -3
Query: 327 SPRGEEPLEKMTESISETEDERSYTPC-LDENKSKDTSLETEKDKG--LEGLDTEMISED 157
S +G EP + ES SE ED S + DE+ D+ ++E++KG E L+ E + D
Sbjct: 934 SDQGYEPSDAEPESESEDEDSDSESLVESDEDDEDDSEEDSEEEKGKTWEELEREASNAD 993
Query: 156 --EGNEMFSEEDK 124
G E SEE++
Sbjct: 994 RENGAESDSEEER 1006
>03_06_0195 + 32256771-32258792
Length = 673
Score = 33.1 bits (72), Expect = 0.30
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -3
Query: 315 EEPLEKMTESISETED-ERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMIS-EDEGNEM 142
E ++ ES E D E T L+ + +DT TE + LD + S +D+G+E
Sbjct: 192 ETDSDEYIESTDEESDYEEEDTTDLESDSDEDTE-STESSHDEDDLDDDDESLDDDGSEC 250
Query: 141 FSEEDK 124
F EEDK
Sbjct: 251 FDEEDK 256
>01_01_1189 + 9454042-9455655
Length = 537
Score = 33.1 bits (72), Expect = 0.30
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = -3
Query: 354 GDRERPASVSPRGEEPLEKMTESIS-ETEDERSYTPCLDENKSKDTSLETEKDKGLEGLD 178
GD + A+ +E E++ E +S +TED++ D ++ K T+L EKD E D
Sbjct: 393 GDHKEGANTVVNKKE--EQIEEPVSHKTEDDKQGADTPDVSEDKKTTLAAEKDGNGESKD 450
Query: 177 TEMISEDEGNEMFSEE 130
E+ + N+M EE
Sbjct: 451 -EVAAPKSSNDMGREE 465
>12_01_0618 -
5099021-5099668,5099701-5100221,5100311-5100352,
5100905-5100962
Length = 422
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3
Query: 243 DENKSKDTSLETEKDKGLEGLDTEMISEDEGNE 145
D+N+ T LE EKDK E L+T ++ E E NE
Sbjct: 344 DKNEHHKTMLEEEKDKN-ERLNTMLVEEKEKNE 375
>11_01_0678 -
5534879-5534883,5535430-5535529,5535638-5535799,
5536000-5536966,5537444-5537561,5538682-5538871,
5538952-5539107,5539296-5540315
Length = 905
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = -3
Query: 321 RGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEM 142
RG PL + S ++ DE++S D E E D+ +G +++ S+D ++
Sbjct: 76 RGCSPLREFDLEFSSCREKDEKGEDSDEDESDDDRGEDESDEDSDGDESDEHSDDGESDD 135
Query: 141 FSEEDK 124
S+ED+
Sbjct: 136 DSDEDE 141
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = -3
Query: 315 EEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFS 136
E+ +E+ + E L+E K ++ S E E+ G EG D E ++EG+E +
Sbjct: 107 EDEVEESEDDDEGVEVSDEEVEELEEGKGEEKSDEVEE--GEEGQDGEEEEKEEGDEEAA 164
Query: 135 EEDK 124
EE++
Sbjct: 165 EEEE 168
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = -3
Query: 315 EEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFS 136
+E E+ TE +E E E +E KD E E+ G + + E EDE E
Sbjct: 208 KEDKEEETEKDNEKEKEDK-----EEETKKDNEKEKEQLMGTDEKEKEKEKEDENEEEKL 262
Query: 135 EEDKPK 118
EE++ K
Sbjct: 263 EEEEKK 268
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 303 EKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDE-GNEMFSEED 127
EK E + T+++ DEN+ + E +KDK + + E +E+E GNE E D
Sbjct: 235 EKEKEQLMGTDEKEKEKEKEDENEEEKLEEEEKKDKEEKLEEKEKENEEENGNEKDKEND 294
>10_08_0106 +
14842748-14843085,14843122-14843250,14844145-14844211,
14847177-14847324,14847998-14848097,14848306-14848384,
14848527-14848687,14848829-14848908,14849319-14849475,
14849575-14849723,14849909-14850076,14850426-14850719,
14851002-14851046,14851213-14851462,14851707-14851835,
14852799-14853039,14853977-14854642
Length = 1066
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 351 DRERPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDK 196
+RER S E E+ E E E ER D+N+ +D E ++D+
Sbjct: 764 ERERERGHSRERERERERERERERERERERERERDRDQNRDRDRDQERDRDR 815
>07_03_1228 - 25009736-25010965
Length = 409
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = -3
Query: 315 EEPLEKMTES-ISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMF 139
EE K+ ES I ET+ E + +D+++ ++ E +++ E + E E+E E
Sbjct: 264 EERSTKIGESYIYETKVENTNEEMVDDDEGEEEPEEGGEEEEEEEEEEEEEEEEEPEEGG 323
Query: 138 SEEDKPKSVG 109
EE++P+ G
Sbjct: 324 EEEEEPEEGG 333
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = -3
Query: 351 DRERPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTE 172
+ E P EEP E E E E+E P + +D E E+++ E E
Sbjct: 315 EEEEPEEGGEEEEEPEEGGEEEEEEEEEEEEEEPEEGAEEEEDDEEEDEEEEEEE----E 370
Query: 171 MISEDEGNE 145
I EDE E
Sbjct: 371 DIEEDENEE 379
>07_01_0739 + 5631034-5631166,5631246-5631682,5632455-5632574
Length = 229
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -3
Query: 213 ETEKDKGLEGLDTEMISEDE---GNEMFSEEDKPKSVGAPC 100
E E+++ +G D +++ D+ G E EE++ K GA C
Sbjct: 93 EEEEEEAFQGSDAKVVDGDDDGGGEEEEEEEEEGKKAGAEC 133
>06_01_0505 +
3639867-3640301,3640386-3640792,3641024-3641609,
3642185-3642244
Length = 495
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -2
Query: 355 RRPRATRLCVSAGRGAAGE-DDRVNQRDGGRAQLHALSRRK 236
R P TR S+ GAAGE R + DGG + A RRK
Sbjct: 44 REPARTRGSSSSLAGAAGERRRRRGEEDGGEVEAEAERRRK 84
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 28.3 bits (60), Expect = 8.5
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = -3
Query: 345 ERPASVSPRGEEPLEKMTESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMI 166
E + +GEE E+ + ++ E+ DE+ KD + KD+ E E +
Sbjct: 185 EEESGAEKQGEEEAEEKGSADNDNEEGDKNANISDEHLKKDGGKDGNKDEAEE----EEV 240
Query: 165 SEDEGNEMFSEEDKPKS 115
SE + ++E+ PK+
Sbjct: 241 SEADKKVEENKEETPKN 257
>02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783
Length = 1439
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = -3
Query: 294 TESISETEDERSYTPCLDENKSKDTSLETEKDKGLEGLDTEMISEDEGNEMFSEED 127
T+ ++E E+E T DE+++ D S E D+ EG D E + E+E E E+D
Sbjct: 423 TDDVAEIEEEELGT---DEDETSDDSDENFSDE--EG-DEEELEEEEEEEEEEEDD 472
>01_01_0450 - 3344203-3344259,3344339-3344506,3344743-3344956,
3345039-3345101,3345582-3345769,3345846-3346029,
3346535-3346606,3346676-3346787,3346878-3346953,
3347050-3347100,3347179-3347260,3347331-3347567,
3347650-3347772,3348141-3348326,3348680-3349625,
3350426-3350551,3350683-3350811,3350918-3351049,
3351167-3351301,3351450-3351575,3352080-3352148,
3352149-3352205,3352302-3352436,3352600-3352704,
3352841-3352906,3353333-3353503,3353806-3353983
Length = 1395
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 480 HEASGKASASVHLLGRYRAR 539
HEASG +H+ G YRAR
Sbjct: 1017 HEASGTVKLMIHINGTYRAR 1036
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,260,627
Number of Sequences: 37544
Number of extensions: 295315
Number of successful extensions: 1186
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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